RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 MCMDC2Q4G0Z9 681 aa12.35□□□□□ -0.43
TOP3B-210ENST00000444502 UTP14CQ5TAP6 766 aaKnown RBP12.35□□□□□ -0.43
TOP3B-210ENST00000444502 Q6ZUG5 572 aa12.35□□□□□ -0.43
TOP3B-210ENST00000444502 ZNF592Q92610 1267 aa12.35□□□□□ -0.43
TOP3B-210ENST00000444502 TRPC5Q9UL62 973 aaPredicted RBP12.35□□□□□ -0.43
TOP3B-210ENST00000444502 LRSAM1Q6UWE0 723 aa12.35□□□□□ -0.43
TOP3B-210ENST00000444502 CCDC191Q8NCU4 936 aa12.35□□□□□ -0.43
TOP3B-210ENST00000444502 A0A1B0GUL7 405 aa12.34□□□□□ -0.43
TOP3B-210ENST00000444502 SPATA31D1Q6ZQQ2 1576 aa12.34□□□□□ -0.43
TOP3B-210ENST00000444502 IFIT3O14879 490 aaKnown RBP12.34□□□□□ -0.43
TOP3B-210ENST00000444502 GADD45BO75293 160 aaPredicted RBP12.34□□□□□ -0.43
TOP3B-210ENST00000444502 U2AF2P26368 475 aaKnown RBP eCLIP12.34□□□□□ -0.43
TOP3B-210ENST00000444502 RUFY3Q7L099 469 aa12.34□□□□□ -0.43
TOP3B-210ENST00000444502 CCDC43Q96MW1 224 aaKnown RBP12.34□□□□□ -0.43
TOP3B-210ENST00000444502 SEC62Q99442 399 aaKnown RBP12.34□□□□□ -0.43
TOP3B-210ENST00000444502 NYXQ9GZU5 481 aa12.34□□□□□ -0.43
TOP3B-210ENST00000444502 RBSNQ9H1K0 784 aa12.34□□□□□ -0.43
TOP3B-210ENST00000444502 PAG1Q9NWQ8 432 aa12.34□□□□□ -0.43
TOP3B-210ENST00000444502 AOX1Q06278 1338 aa12.34□□□□□ -0.43
TOP3B-210ENST00000444502 RICTORQ6R327 1708 aa12.34□□□□□ -0.43
TOP3B-210ENST00000444502 A0A0D9SFI3 127 aa12.34□□□□□ -0.43
TOP3B-210ENST00000444502 MICU3Q86XE3 530 aa12.34□□□□□ -0.43
TOP3B-210ENST00000444502 CCAR1Q8IX12 1150 aaKnown RBP12.34□□□□□ -0.43
TOP3B-210ENST00000444502 ZKSCAN5Q9Y2L8 839 aa12.33□□□□□ -0.43
TOP3B-210ENST00000444502 KDRP35968 1356 aa12.33□□□□□ -0.44
TOP3B-210ENST00000444502 SLC27A2O14975 620 aa12.33□□□□□ -0.44
TOP3B-210ENST00000444502 MAP3K11Q16584 847 aa12.33□□□□□ -0.44
TOP3B-210ENST00000444502 ADCK5Q3MIX3 580 aa12.33□□□□□ -0.44
TOP3B-210ENST00000444502 PIGBQ92521 554 aa12.33□□□□□ -0.44
TOP3B-210ENST00000444502 EYA2O00167 538 aa12.33□□□□□ -0.44
TOP3B-210ENST00000444502 ZSCAN20P17040 1043 aaPredicted RBP12.33□□□□□ -0.44
TOP3B-210ENST00000444502 UBE2HP62256 183 aa12.33□□□□□ -0.44
TOP3B-210ENST00000444502 RBM26Q5T8P6 1007 aaKnown RBP12.33□□□□□ -0.44
TOP3B-210ENST00000444502 ZNF396Q96N95 335 aaPredicted RBP12.33□□□□□ -0.44
TOP3B-210ENST00000444502 STX8Q9UNK0 236 aa12.33□□□□□ -0.44
TOP3B-210ENST00000444502 TECPR2O15040 1411 aa12.33□□□□□ -0.44
TOP3B-210ENST00000444502 PICALMQ13492 652 aa12.33□□□□□ -0.44
TOP3B-210ENST00000444502 NBPF14Q5TI25 921 aa12.33□□□□□ -0.44
TOP3B-210ENST00000444502 ZNF444Q8N0Y2 327 aaPredicted RBP12.33□□□□□ -0.44
TOP3B-210ENST00000444502 HMG20BQ9P0W2 317 aa12.33□□□□□ -0.44
TOP3B-210ENST00000444502 STK32BQ9NY57 414 aa12.32□□□□□ -0.44
TOP3B-210ENST00000444502 TMEM63CQ9P1W3 806 aa12.32□□□□□ -0.44
TOP3B-210ENST00000444502 ANKARQ7Z5J8 1434 aa12.32□□□□□ -0.44
TOP3B-210ENST00000444502 UQCRFS1P1P0C7P4 283 aa12.32□□□□□ -0.44
TOP3B-210ENST00000444502 TCIRG1Q13488 830 aa12.32□□□□□ -0.44
TOP3B-210ENST00000444502 TTF1Q15361 905 aaPredicted RBP12.32□□□□□ -0.44
TOP3B-210ENST00000444502 SCAND2PQ9GZW5 306 aaPredicted RBP12.32□□□□□ -0.44
TOP3B-210ENST00000444502 TMEM51Q9NW97 253 aa12.32□□□□□ -0.44
TOP3B-210ENST00000444502 CFAP45Q9UL16 551 aa12.32□□□□□ -0.44
TOP3B-210ENST00000444502 GOLGA8BA8MQT2 603 aa12.32□□□□□ -0.44
TOP3B-210ENST00000444502 BRD1O95696 1058 aa12.32□□□□□ -0.44
TOP3B-210ENST00000444502 POLA2Q14181 598 aa12.32□□□□□ -0.44
TOP3B-210ENST00000444502 NAA16Q6N069 864 aaPredicted RBP12.32□□□□□ -0.44
TOP3B-210ENST00000444502 SEPT12Q8IYM1 358 aa12.32□□□□□ -0.44
TOP3B-210ENST00000444502 PI4K2BQ8TCG2 481 aa12.32□□□□□ -0.44
TOP3B-210ENST00000444502 SHPRHQ149N8 1683 aa12.31□□□□□ -0.44
TOP3B-210ENST00000444502 SASH1O94885 1247 aa12.31□□□□□ -0.44
TOP3B-210ENST00000444502 USPL1Q5W0Q7 1092 aa12.31□□□□□ -0.44
TOP3B-210ENST00000444502 IQCA1Q86XH1 822 aa12.31□□□□□ -0.44
TOP3B-210ENST00000444502 C17orf53Q8N3J3 647 aaPredicted RBP12.31□□□□□ -0.44
TOP3B-210ENST00000444502 TSPY2A6NKD2 308 aa12.31□□□□□ -0.44
TOP3B-210ENST00000444502 CRKLP46109 303 aaKnown RBP12.31□□□□□ -0.44
TOP3B-210ENST00000444502 APOBRQ0VD83 1088 aa12.31□□□□□ -0.44
TOP3B-210ENST00000444502 EPHA10Q5JZY3 1008 aa12.31□□□□□ -0.44
TOP3B-210ENST00000444502 LSG1Q9H089 658 aaKnown RBP12.31□□□□□ -0.44
TOP3B-210ENST00000444502 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.31□□□□□ -0.444e-7■■■□□ 15.1
TOP3B-210ENST00000444502 VAT1LQ9HCJ6 419 aa12.31□□□□□ -0.44
TOP3B-210ENST00000444502 SLC4A4Q9Y6R1 1079 aa12.31□□□□□ -0.44
TOP3B-210ENST00000444502 ATP10DQ9P241 1426 aa12.31□□□□□ -0.44
TOP3B-210ENST00000444502 PDE8AO60658 829 aa12.3□□□□□ -0.44
TOP3B-210ENST00000444502 FAM196AQ6ZSG2 479 aa12.3□□□□□ -0.44
TOP3B-210ENST00000444502 IGKV5-2P06315 115 aa12.3□□□□□ -0.44
TOP3B-210ENST00000444502 SOGA3Q5TF21 947 aa12.3□□□□□ -0.44
TOP3B-210ENST00000444502 MAGEB6Q8N7X4 407 aa12.3□□□□□ -0.44
TOP3B-210ENST00000444502 NOL7Q9UMY1 257 aaKnown RBP12.3□□□□□ -0.44
TOP3B-210ENST00000444502 ME3Q16798 604 aa12.3□□□□□ -0.44
TOP3B-210ENST00000444502 PARP10Q53GL7 1025 aa12.3□□□□□ -0.44
TOP3B-210ENST00000444502 BAG3O95817 575 aa12.3□□□□□ -0.44
TOP3B-210ENST00000444502 TERF1P54274 439 aa12.3□□□□□ -0.44
TOP3B-210ENST00000444502 TTLL12Q14166 644 aaPredicted RBP12.3□□□□□ -0.44
TOP3B-210ENST00000444502 NOC3LQ8WTT2 800 aaKnown RBP12.3□□□□□ -0.44
TOP3B-210ENST00000444502 TIGD1Q96MW7 591 aa12.3□□□□□ -0.44
TOP3B-210ENST00000444502 UFL1O94874 794 aa12.29□□□□□ -0.44
TOP3B-210ENST00000444502 HMGB1P09429 215 aaKnown RBP12.29□□□□□ -0.44
TOP3B-210ENST00000444502 CCDC96Q2M329 555 aa12.29□□□□□ -0.44
TOP3B-210ENST00000444502 LRRC24Q50LG9 513 aa12.29□□□□□ -0.44
TOP3B-210ENST00000444502 GPT2Q8TD30 523 aa12.29□□□□□ -0.44
TOP3B-210ENST00000444502 C8orf76Q96K31 380 aa12.29□□□□□ -0.44
TOP3B-210ENST00000444502 DBNLQ9UJU6 430 aaKnown RBP12.29□□□□□ -0.44
TOP3B-210ENST00000444502 SLC12A7Q9Y666 1083 aa12.29□□□□□ -0.44
TOP3B-210ENST00000444502 KCNQ2O43526 872 aa12.29□□□□□ -0.44
TOP3B-210ENST00000444502 LDHCP07864 332 aa12.29□□□□□ -0.44
TOP3B-210ENST00000444502 TMEM67Q5HYA8 995 aa12.29□□□□□ -0.44
TOP3B-210ENST00000444502 IFT172Q9UG01 1749 aa12.29□□□□□ -0.44
TOP3B-210ENST00000444502 C1orf167Q5SNV9 1468 aa12.29□□□□□ -0.44
TOP3B-210ENST00000444502 ADGRB2O60241 1585 aa12.29□□□□□ -0.44
TOP3B-210ENST00000444502 AFF2P51816 1311 aa12.29□□□□□ -0.44
TOP3B-210ENST00000444502 ADCY5O95622 1261 aa12.29□□□□□ -0.44
TOP3B-210ENST00000444502 MFSD6Q6ZSS7 791 aa12.29□□□□□ -0.44
TOP3B-210ENST00000444502 SMIM5Q71RC9 77 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms