RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 FAM160A1Q05DH4 1040 aa7.28□□□□□ -1.24
TM9SF3-202ENST00000443638 APOBRQ0VD83 1088 aa7.28□□□□□ -1.24
TM9SF3-202ENST00000443638 CAMK2GQ13555 558 aaPredicted RBP7.28□□□□□ -1.24
TM9SF3-202ENST00000443638 PMEPA1Q969W9 287 aa7.28□□□□□ -1.24
TM9SF3-202ENST00000443638 LRRC3Q9BY71 257 aa7.28□□□□□ -1.24
TM9SF3-202ENST00000443638 EHD4Q9H223 541 aa7.28□□□□□ -1.24
TM9SF3-202ENST00000443638 LATS2Q9NRM7 1088 aa7.28□□□□□ -1.24
TM9SF3-202ENST00000443638 PPP4R2Q9NY27 417 aa7.28□□□□□ -1.24
TM9SF3-202ENST00000443638 ANKIB1Q9P2G1 1089 aa7.28□□□□□ -1.24
TM9SF3-202ENST00000443638 PDZRN3Q9UPQ7 1066 aa7.28□□□□□ -1.24
TM9SF3-202ENST00000443638 TLR6Q9Y2C9 796 aa7.28□□□□□ -1.24
TM9SF3-202ENST00000443638 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.28□□□□□ -1.24
TM9SF3-202ENST00000443638 TMEM238LA0A1B0GVL6 79 aa7.27□□□□□ -1.25
TM9SF3-202ENST00000443638 CCDC85CA6NKD9 419 aa7.27□□□□□ -1.25
TM9SF3-202ENST00000443638 FCGRTP55899 365 aa7.27□□□□□ -1.25
TM9SF3-202ENST00000443638 NNTQ13423 1086 aa7.27□□□□□ -1.25
TM9SF3-202ENST00000443638 TKFCQ3LXA3 575 aa7.27□□□□□ -1.25
TM9SF3-202ENST00000443638 FAM196AQ6ZSG2 479 aa7.27□□□□□ -1.25
TM9SF3-202ENST00000443638 MRGPRX2Q96LB1 330 aa7.27□□□□□ -1.25
TM9SF3-202ENST00000443638 MYH16Q9H6N6 1097 aa7.27□□□□□ -1.25
TM9SF3-202ENST00000443638 C11orf16Q9NQ32 467 aa7.27□□□□□ -1.25
TM9SF3-202ENST00000443638 PPT2Q9UMR5 302 aa7.27□□□□□ -1.25
TM9SF3-202ENST00000443638 G3BP2Q9UN86 482 aaKnown RBP7.27□□□□□ -1.25
TM9SF3-202ENST00000443638 LEMD3Q9Y2U8 911 aa7.27□□□□□ -1.25
TM9SF3-202ENST00000443638 R3HCC1Q9Y3T6 440 aaKnown RBP7.27□□□□□ -1.25
TM9SF3-202ENST00000443638 PDPK1O15530 556 aa7.26□□□□□ -1.25
TM9SF3-202ENST00000443638 XYLBO75191 536 aa7.26□□□□□ -1.25
TM9SF3-202ENST00000443638 GTF2E1P29083 439 aaPredicted RBP7.26□□□□□ -1.25
TM9SF3-202ENST00000443638 RNF144AP50876 292 aaPredicted RBP7.26□□□□□ -1.25
TM9SF3-202ENST00000443638 TYRO3Q06418 890 aa7.26□□□□□ -1.25
TM9SF3-202ENST00000443638 MAP3K11Q16584 847 aa7.26□□□□□ -1.25
TM9SF3-202ENST00000443638 C2orf27AQ580R0 203 aa7.26□□□□□ -1.25
TM9SF3-202ENST00000443638 CCDC81Q6ZN84 652 aa7.26□□□□□ -1.25
TM9SF3-202ENST00000443638 NLRP13Q86W25 1043 aa7.26□□□□□ -1.25
TM9SF3-202ENST00000443638 GOLM1Q8NBJ4 401 aa7.26□□□□□ -1.25
TM9SF3-202ENST00000443638 NKD1Q969G9 470 aa7.26□□□□□ -1.25
TM9SF3-202ENST00000443638 ITPKCQ96DU7 683 aa7.26□□□□□ -1.25
TM9SF3-202ENST00000443638 TCF12Q99081 682 aa7.26□□□□□ -1.25
TM9SF3-202ENST00000443638 PSMD1Q99460 953 aa7.26□□□□□ -1.25
TM9SF3-202ENST00000443638 IER2Q9BTL4 223 aa7.26□□□□□ -1.25
TM9SF3-202ENST00000443638 SALL4Q9UJQ4 1053 aa7.26□□□□□ -1.25
TM9SF3-202ENST00000443638 ROBO2Q9HCK4 1378 aa7.25□□□□□ -1.25
TM9SF3-202ENST00000443638 SPATA31C2B4DYI2 1134 aa7.25□□□□□ -1.25
TM9SF3-202ENST00000443638 FBXO24O75426 580 aa7.25□□□□□ -1.25
TM9SF3-202ENST00000443638 CELA3AP09093 270 aa7.25□□□□□ -1.25
TM9SF3-202ENST00000443638 EDN3P14138 238 aa7.25□□□□□ -1.25
TM9SF3-202ENST00000443638 TATP17735 454 aaPredicted RBP7.25□□□□□ -1.25
TM9SF3-202ENST00000443638 TFE3P19532 575 aaPredicted RBP7.25□□□□□ -1.25
TM9SF3-202ENST00000443638 CES1P23141 567 aa7.25□□□□□ -1.25
TM9SF3-202ENST00000443638 RELBQ01201 579 aa7.25□□□□□ -1.25
TM9SF3-202ENST00000443638 IFRD2Q12894 506 aaPredicted RBP7.25□□□□□ -1.25
TM9SF3-202ENST00000443638 SNAP47Q5SQN1 464 aa7.25□□□□□ -1.25
TM9SF3-202ENST00000443638 AGMOQ6ZNB7 445 aa7.25□□□□□ -1.25
TM9SF3-202ENST00000443638 KRT26Q7Z3Y9 468 aa7.25□□□□□ -1.25
TM9SF3-202ENST00000443638 EXOC8Q8IYI6 725 aa7.25□□□□□ -1.25
TM9SF3-202ENST00000443638 ZIC5Q96T25 663 aa7.25□□□□□ -1.25
TM9SF3-202ENST00000443638 MAPK8IP1Q9UQF2 711 aa7.25□□□□□ -1.25
TM9SF3-202ENST00000443638 EIF6P56537 245 aaKnown RBP7.24□□□□□ -1.25
TM9SF3-202ENST00000443638 GORABQ5T7V8 394 aa7.24□□□□□ -1.25
TM9SF3-202ENST00000443638 ZNF787Q6DD87 383 aa7.24□□□□□ -1.25
TM9SF3-202ENST00000443638 LIAT1Q6ZQX7 453 aa7.24□□□□□ -1.25
TM9SF3-202ENST00000443638 FMNL3Q8IVF7 1028 aa7.24□□□□□ -1.25
TM9SF3-202ENST00000443638 THAP3Q8WTV1 239 aaPredicted RBP7.24□□□□□ -1.25
TM9SF3-202ENST00000443638 JDP2Q8WYK2 163 aa7.24□□□□□ -1.25
TM9SF3-202ENST00000443638 ZNF395Q9H8N7 513 aaPredicted RBP7.24□□□□□ -1.25
TM9SF3-202ENST00000443638 ACTR10Q9NZ32 417 aa7.24□□□□□ -1.25
TM9SF3-202ENST00000443638 GABBR1Q9UBS5 961 aa7.24□□□□□ -1.25
TM9SF3-202ENST00000443638 THRAP3Q9Y2W1 955 aaKnown RBP7.24□□□□□ -1.25
TM9SF3-202ENST00000443638 PEX14O75381 377 aa7.23□□□□□ -1.25
TM9SF3-202ENST00000443638 CYP2E1P05181 493 aaPredicted RBP7.23□□□□□ -1.25
TM9SF3-202ENST00000443638 HCLS1P14317 486 aaPredicted RBP7.23□□□□□ -1.25
TM9SF3-202ENST00000443638 EPB42P16452 691 aa7.23□□□□□ -1.25
TM9SF3-202ENST00000443638 POU3F3P20264 500 aaPredicted RBP7.23□□□□□ -1.25
TM9SF3-202ENST00000443638 RPS26P62854 115 aaKnown RBP7.23□□□□□ -1.25
TM9SF3-202ENST00000443638 DALRD3Q5D0E6 543 aaKnown RBP7.23□□□□□ -1.25
TM9SF3-202ENST00000443638 TAF7LQ5H9L4 462 aa7.23□□□□□ -1.25
TM9SF3-202ENST00000443638 CCNJLQ8IV13 435 aa7.23□□□□□ -1.25
TM9SF3-202ENST00000443638 PGBD3Q8N328 593 aa7.23□□□□□ -1.25
TM9SF3-202ENST00000443638 OR6P1Q8NGX9 317 aa7.23□□□□□ -1.25
TM9SF3-202ENST00000443638 AIDAQ96BJ3 306 aa7.23□□□□□ -1.25
TM9SF3-202ENST00000443638 CEP44Q9C0F1 390 aa7.23□□□□□ -1.25
TM9SF3-202ENST00000443638 ST7Q9NRC1 585 aa7.23□□□□□ -1.25
TM9SF3-202ENST00000443638 DZANK1Q9NVP4 752 aa7.23□□□□□ -1.25
TM9SF3-202ENST00000443638 AKAP2Q9Y2D5 859 aa7.23□□□□□ -1.25
TM9SF3-202ENST00000443638 ENC1O14682 589 aa7.22□□□□□ -1.25
TM9SF3-202ENST00000443638 KCNQ2O43526 872 aa7.22□□□□□ -1.25
TM9SF3-202ENST00000443638 TBX4P57082 545 aa7.22□□□□□ -1.25
TM9SF3-202ENST00000443638 SEZ6Q53EL9 994 aa7.22□□□□□ -1.25
TM9SF3-202ENST00000443638 SLC27A3Q5K4L6 730 aa7.22□□□□□ -1.25
TM9SF3-202ENST00000443638 ODR4Q5SWX8 454 aa7.22□□□□□ -1.25
TM9SF3-202ENST00000443638 KANK3Q6NY19 840 aa7.22□□□□□ -1.25
TM9SF3-202ENST00000443638 TPTE2Q6XPS3 522 aa7.22□□□□□ -1.25
TM9SF3-202ENST00000443638 DTHD1Q6ZMT9 781 aa7.22□□□□□ -1.25
TM9SF3-202ENST00000443638 LRRC69Q6ZNQ3 347 aa7.22□□□□□ -1.25
TM9SF3-202ENST00000443638 CCDC84Q86UT8 332 aaPredicted RBP7.22□□□□□ -1.25
TM9SF3-202ENST00000443638 TRIM42Q8IWZ5 723 aa7.22□□□□□ -1.25
TM9SF3-202ENST00000443638 RBBP8NLQ8NC74 664 aaPredicted RBP7.22□□□□□ -1.25
TM9SF3-202ENST00000443638 FBXO27Q8NI29 283 aa7.22□□□□□ -1.25
TM9SF3-202ENST00000443638 PLD4Q96BZ4 506 aa7.22□□□□□ -1.25
TM9SF3-202ENST00000443638 CNTNAP3BQ96NU0 1288 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms