RNA–Protein interactions for RNA: ENST00000439222.5

RAPH1-209, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RAPH1, Length 1,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-209ENST00000439222 NEXNQ0ZGT2 675 aa6.96□□□□□ -1.3
RAPH1-209ENST00000439222 SF3B3Q15393 1217 aaKnown RBP6.96□□□□□ -1.3
RAPH1-209ENST00000439222 C9orf131Q5VYM1 1079 aa6.96□□□□□ -1.3
RAPH1-209ENST00000439222 CENPQQ7L2Z9 268 aaPredicted RBP6.96□□□□□ -1.3
RAPH1-209ENST00000439222 ZNF784Q8NCA9 323 aaPredicted RBP6.96□□□□□ -1.3
RAPH1-209ENST00000439222 ZNF526Q8TF50 670 aaPredicted RBP6.96□□□□□ -1.3
RAPH1-209ENST00000439222 CHMP4BQ9H444 224 aaKnown RBP6.96□□□□□ -1.3
RAPH1-209ENST00000439222 GREM2Q9H772 168 aa6.96□□□□□ -1.3
RAPH1-209ENST00000439222 MTMR7Q9Y216 660 aa6.96□□□□□ -1.3
RAPH1-209ENST00000439222 ZNF646O15015 1829 aaPredicted RBP6.95□□□□□ -1.3
RAPH1-209ENST00000439222 PPEF1O14829 653 aaPredicted RBP6.95□□□□□ -1.3
RAPH1-209ENST00000439222 FOXO4P98177 505 aa6.95□□□□□ -1.3
RAPH1-209ENST00000439222 INTS3Q68E01 1043 aaKnown RBP6.95□□□□□ -1.3
RAPH1-209ENST00000439222 DPY19L2Q6NUT2 758 aa6.95□□□□□ -1.3
RAPH1-209ENST00000439222 RGS22Q8NE09 1264 aa6.95□□□□□ -1.3
RAPH1-209ENST00000439222 TTLL11Q8NHH1 800 aa6.95□□□□□ -1.3
RAPH1-209ENST00000439222 CCDC97Q96F63 343 aaPredicted RBP6.95□□□□□ -1.3
RAPH1-209ENST00000439222 RBM17Q96I25 401 aaKnown RBP6.95□□□□□ -1.3
RAPH1-209ENST00000439222 CRAMP1Q96RY5 1269 aa6.95□□□□□ -1.3
RAPH1-209ENST00000439222 ZNF277Q9NRM2 450 aaPredicted RBP6.95□□□□□ -1.3
RAPH1-209ENST00000439222 ZBTB40Q9NUA8 1239 aa6.95□□□□□ -1.3
RAPH1-209ENST00000439222 RNF181Q9P0P0 153 aa6.95□□□□□ -1.3
RAPH1-209ENST00000439222 CDHR2Q9BYE9 1310 aa6.95□□□□□ -1.3
RAPH1-209ENST00000439222 ZBTB7BO15156 539 aaPredicted RBP6.94□□□□□ -1.3
RAPH1-209ENST00000439222 PDE8AO60658 829 aa6.94□□□□□ -1.3
RAPH1-209ENST00000439222 IGSF3O75054 1194 aa6.94□□□□□ -1.3
RAPH1-209ENST00000439222 ALDH1B1P30837 517 aa6.94□□□□□ -1.3
RAPH1-209ENST00000439222 RBM25P49756 843 aaKnown RBP6.94□□□□□ -1.3
RAPH1-209ENST00000439222 CTSWP56202 376 aa6.94□□□□□ -1.3
RAPH1-209ENST00000439222 GRAPQ13588 217 aa6.94□□□□□ -1.3
RAPH1-209ENST00000439222 FAM161AQ3B820 660 aa6.94□□□□□ -1.3
RAPH1-209ENST00000439222 GRAPLQ8TC17 118 aaPredicted RBP6.94□□□□□ -1.3
RAPH1-209ENST00000439222 SUCLG2Q96I99 432 aa6.94□□□□□ -1.3
RAPH1-209ENST00000439222 GPR101Q96P66 508 aaPredicted RBP6.94□□□□□ -1.3
RAPH1-209ENST00000439222 USP44Q9H0E7 712 aa6.94□□□□□ -1.3
RAPH1-209ENST00000439222 PDZRN3Q9UPQ7 1066 aa6.94□□□□□ -1.3
RAPH1-209ENST00000439222 ARIH1Q9Y4X5 557 aaPredicted RBP6.94□□□□□ -1.3
RAPH1-209ENST00000439222 PCDHB15Q9Y5E8 787 aa6.94□□□□□ -1.3
RAPH1-209ENST00000439222 GRM8O00222 908 aa6.94□□□□□ -1.3
RAPH1-209ENST00000439222 PDE4AP27815 886 aa6.94□□□□□ -1.3
RAPH1-209ENST00000439222 IRX5P78411 483 aaPredicted RBP6.94□□□□□ -1.3
RAPH1-209ENST00000439222 DDX46Q7L014 1031 aaKnown RBP6.94□□□□□ -1.3
RAPH1-209ENST00000439222 PDCD7Q8N8D1 485 aaKnown RBP6.94□□□□□ -1.3
RAPH1-209ENST00000439222 DDX27Q96GQ7 796 aaKnown RBP6.94□□□□□ -1.3
RAPH1-209ENST00000439222 SRCIN1Q9C0H9 1055 aa6.94□□□□□ -1.3
RAPH1-209ENST00000439222 TAOK3Q9H2K8 898 aa6.94□□□□□ -1.3
RAPH1-209ENST00000439222 ATP6V0A2Q9Y487 856 aa6.94□□□□□ -1.3
RAPH1-209ENST00000439222 CCT4P50991 539 aaKnown RBP6.93□□□□□ -1.3
RAPH1-209ENST00000439222 CCDC93Q567U6 631 aa6.93□□□□□ -1.3
RAPH1-209ENST00000439222 IER5LQ5T953 404 aa6.93□□□□□ -1.3
RAPH1-209ENST00000439222 ZNF594Q96JF6 807 aaPredicted RBP6.93□□□□□ -1.3
RAPH1-209ENST00000439222 OCEL1Q9H607 264 aa6.93□□□□□ -1.3
RAPH1-209ENST00000439222 UTYO14607 1347 aa6.92□□□□□ -1.3
RAPH1-209ENST00000439222 SNAP23O00161 211 aa6.92□□□□□ -1.3
RAPH1-209ENST00000439222 ALDH1L1O75891 902 aa6.92□□□□□ -1.3
RAPH1-209ENST00000439222 IGHDP01880 384 aa6.92□□□□□ -1.3
RAPH1-209ENST00000439222 CSF1RP07333 972 aa6.92□□□□□ -1.3
RAPH1-209ENST00000439222 PLCG2P16885 1265 aa6.92□□□□□ -1.3
RAPH1-209ENST00000439222 LMNB1P20700 586 aa6.92□□□□□ -1.3
RAPH1-209ENST00000439222 GPSM2P81274 684 aa6.92□□□□□ -1.3
RAPH1-209ENST00000439222 FKBP4Q02790 459 aaKnown RBP eCLIP6.92□□□□□ -1.3
RAPH1-209ENST00000439222 LMBR1LQ6UX01 489 aa6.92□□□□□ -1.3
RAPH1-209ENST00000439222 ANKRD44Q8N8A2 993 aa6.92□□□□□ -1.3
RAPH1-209ENST00000439222 MEIS3Q99687 375 aa6.92□□□□□ -1.3
RAPH1-209ENST00000439222 PLA2G12BQ9BX93 195 aa6.92□□□□□ -1.3
RAPH1-209ENST00000439222 POLLQ9UGP5 575 aa6.92□□□□□ -1.3
RAPH1-209ENST00000439222 PSME4Q14997 1843 aa6.92□□□□□ -1.3
RAPH1-209ENST00000439222 ZNF541Q9H0D2 1346 aa6.92□□□□□ -1.3
RAPH1-209ENST00000439222 LTBP3Q9NS15 1303 aa6.92□□□□□ -1.3
RAPH1-209ENST00000439222 SEC24BO95487 1268 aa6.92□□□□□ -1.3
RAPH1-209ENST00000439222 ITGA6P23229 1130 aa6.92□□□□□ -1.3
RAPH1-209ENST00000439222 MFAP1P55081 439 aaKnown RBP6.92□□□□□ -1.3
RAPH1-209ENST00000439222 RPS8P62241 208 aaKnown RBP6.92□□□□□ -1.3
RAPH1-209ENST00000439222 HDAC1Q13547 482 aaPredicted RBP6.92□□□□□ -1.3
RAPH1-209ENST00000439222 AOC3Q16853 763 aa6.92□□□□□ -1.3
RAPH1-209ENST00000439222 CCDC152Q4G0S7 254 aa6.92□□□□□ -1.3
RAPH1-209ENST00000439222 FOXD4L5Q5VV16 416 aaPredicted RBP6.92□□□□□ -1.3
RAPH1-209ENST00000439222 SP8Q8IXZ3 490 aa6.92□□□□□ -1.3
RAPH1-209ENST00000439222 KLHDC4Q8TBB5 520 aa6.92□□□□□ -1.3
RAPH1-209ENST00000439222 FOXD4L4Q8WXT5 416 aaPredicted RBP6.92□□□□□ -1.3
RAPH1-209ENST00000439222 RWDD1Q9H446 243 aaPredicted RBP6.92□□□□□ -1.3
RAPH1-209ENST00000439222 BICC1Q9H694 974 aaKnown RBP6.92□□□□□ -1.3
RAPH1-209ENST00000439222 NMRK2Q9NPI5 230 aa6.92□□□□□ -1.3
RAPH1-209ENST00000439222 C9orf78Q9NZ63 289 aaPredicted RBP6.92□□□□□ -1.3
RAPH1-209ENST00000439222 SERPINA10Q9UK55 444 aa6.92□□□□□ -1.3
RAPH1-209ENST00000439222 WDR90Q96KV7 1748 aa6.91□□□□□ -1.3
RAPH1-209ENST00000439222 POLR2AP24928 1970 aaKnown RBP6.91□□□□□ -1.3
RAPH1-209ENST00000439222 POTECB2RU33 542 aa6.91□□□□□ -1.3
RAPH1-209ENST00000439222 BBOX1O75936 387 aa6.91□□□□□ -1.3
RAPH1-209ENST00000439222 KLRK1P26718 216 aa6.91□□□□□ -1.3
RAPH1-209ENST00000439222 IARSP41252 1262 aaKnown RBP6.91□□□□□ -1.3
RAPH1-209ENST00000439222 PSMD1Q99460 953 aa6.91□□□□□ -1.3
RAPH1-209ENST00000439222 GZF1Q9H116 711 aaPredicted RBP6.91□□□□□ -1.3
RAPH1-209ENST00000439222 KCNQ5Q9NR82 932 aa6.91□□□□□ -1.3
RAPH1-209ENST00000439222 NSFL1CQ9UNZ2 370 aaKnown RBP6.91□□□□□ -1.3
RAPH1-209ENST00000439222 RTL9Q8NET4 1388 aa6.9□□□□□ -1.3
RAPH1-209ENST00000439222 DDNO94850 711 aaPredicted RBP6.9□□□□□ -1.3
RAPH1-209ENST00000439222 TXNRD3Q86VQ6 643 aa6.9□□□□□ -1.3
RAPH1-209ENST00000439222 RTKN2Q8IZC4 609 aa6.9□□□□□ -1.3
RAPH1-209ENST00000439222 HELBQ8NG08 1087 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms