RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 TRIM6-TRIM34B2RNG4 842 aa22.21■■□□□ 1.15
HMGN1-206ENST00000431390 PDE6BP35913 854 aa22.21■■□□□ 1.15
HMGN1-206ENST00000431390 FSTL1Q12841 308 aa22.21■■□□□ 1.15
HMGN1-206ENST00000431390 CNTROBQ8N137 903 aa22.21■■□□□ 1.15
HMGN1-206ENST00000431390 XAGE2Q96GT9 111 aa22.21■■□□□ 1.15
HMGN1-206ENST00000431390 RASSF7Q02833 373 aa22.21■■□□□ 1.15
HMGN1-206ENST00000431390 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.21■■□□□ 1.15
HMGN1-206ENST00000431390 KLRG1Q96E93 195 aa22.21■■□□□ 1.15
HMGN1-206ENST00000431390 CRAMP1Q96RY5 1269 aa22.21■■□□□ 1.15
HMGN1-206ENST00000431390 MINPP1Q9UNW1 487 aa22.21■■□□□ 1.15
HMGN1-206ENST00000431390 SLC5A1P13866 664 aa22.2■■□□□ 1.14
HMGN1-206ENST00000431390 CCDC158Q5M9N0 1113 aa22.2■■□□□ 1.14
HMGN1-206ENST00000431390 TBC1D9Q6ZT07 1266 aa22.2■■□□□ 1.14
HMGN1-206ENST00000431390 HELBQ8NG08 1087 aaPredicted RBP22.2■■□□□ 1.14
HMGN1-206ENST00000431390 RILPL2Q969X0 211 aa22.2■■□□□ 1.14
HMGN1-206ENST00000431390 COL11A2P13942 1736 aaPredicted RBP22.19■■□□□ 1.14
HMGN1-206ENST00000431390 EIF5BO60841 1220 aaKnown RBP22.19■■□□□ 1.14
HMGN1-206ENST00000431390 CASC1Q6TDU7 716 aa22.19■■□□□ 1.14
HMGN1-206ENST00000431390 ANKRD2Q9GZV1 360 aa22.19■■□□□ 1.14
HMGN1-206ENST00000431390 TAF5LO75529 589 aa22.18■■□□□ 1.14
HMGN1-206ENST00000431390 ADORA1P30542 326 aa22.18■■□□□ 1.14
HMGN1-206ENST00000431390 GORABQ5T7V8 394 aa22.18■■□□□ 1.14
HMGN1-206ENST00000431390 EVI5LQ96CN4 794 aa22.18■■□□□ 1.14
HMGN1-206ENST00000431390 BOLA2Q9H3K6 86 aa22.18■■□□□ 1.14
HMGN1-206ENST00000431390 IFIT1P09914 478 aaKnown RBP22.17■■□□□ 1.14
HMGN1-206ENST00000431390 UBE4AQ14139 1066 aa22.17■■□□□ 1.14
HMGN1-206ENST00000431390 TMC4Q7Z404 712 aa22.17■■□□□ 1.14
HMGN1-206ENST00000431390 BBOX1O75936 387 aa22.16■■□□□ 1.14
HMGN1-206ENST00000431390 SRGNP10124 158 aa22.16■■□□□ 1.14
HMGN1-206ENST00000431390 NPR1P16066 1061 aa22.16■■□□□ 1.14
HMGN1-206ENST00000431390 ZNF512BQ96KM6 892 aaPredicted RBP22.16■■□□□ 1.14
HMGN1-206ENST00000431390 HAUS7Q99871 368 aa22.16■■□□□ 1.14
HMGN1-206ENST00000431390 LRRC37AA6NMS7 1700 aa22.16■■□□□ 1.14
HMGN1-206ENST00000431390 MAP4K4O95819 1239 aaPredicted RBP22.16■■□□□ 1.14
HMGN1-206ENST00000431390 TTC39AQ5SRH9 613 aa22.16■■□□□ 1.14
HMGN1-206ENST00000431390 JMYQ8N9B5 988 aa22.16■■□□□ 1.14
HMGN1-206ENST00000431390 SEC24BO95487 1268 aa22.14■■□□□ 1.13
HMGN1-206ENST00000431390 PRELPP51888 382 aa22.14■■□□□ 1.13
HMGN1-206ENST00000431390 SMC1BQ8NDV3 1235 aa22.14■■□□□ 1.13
HMGN1-206ENST00000431390 MASTLQ96GX5 879 aa22.14■■□□□ 1.13
HMGN1-206ENST00000431390 ALDH1B1P30837 517 aa22.13■■□□□ 1.13
HMGN1-206ENST00000431390 RBM19Q9Y4C8 960 aaKnown RBP22.13■■□□□ 1.13
HMGN1-206ENST00000431390 ZC3H4Q9UPT8 1303 aaKnown RBP22.13■■□□□ 1.13
HMGN1-206ENST00000431390 AKAP11Q9UKA4 1901 aa22.13■■□□□ 1.13
HMGN1-206ENST00000431390 UQCRFS1P1P0C7P4 283 aa22.12■■□□□ 1.13
HMGN1-206ENST00000431390 CHMLP26374 656 aa22.12■■□□□ 1.13
HMGN1-206ENST00000431390 COL13A1Q5TAT6 717 aaPredicted RBP22.12■■□□□ 1.13
HMGN1-206ENST00000431390 CCDC102BQ68D86 513 aa22.12■■□□□ 1.13
HMGN1-206ENST00000431390 UPF2Q9HAU5 1272 aaKnown RBP22.12■■□□□ 1.13
HMGN1-206ENST00000431390 RFX7Q2KHR2 1363 aa22.12■■□□□ 1.13
HMGN1-206ENST00000431390 LMNB1P20700 586 aa22.12■■□□□ 1.13
HMGN1-206ENST00000431390 ARID4AP29374 1257 aaPredicted RBP22.12■■□□□ 1.13
HMGN1-206ENST00000431390 TICAM2Q86XR7 235 aa22.12■■□□□ 1.13
HMGN1-206ENST00000431390 DNAJC2Q99543 621 aaKnown RBP22.12■■□□□ 1.13
HMGN1-206ENST00000431390 CACNA1SQ13698 1873 aa22.11■■□□□ 1.13
HMGN1-206ENST00000431390 H0YIN7 160 aa22.11■■□□□ 1.13
HMGN1-206ENST00000431390 SNAP23O00161 211 aa22.11■■□□□ 1.13
HMGN1-206ENST00000431390 STYK1Q6J9G0 422 aa22.11■■□□□ 1.13
HMGN1-206ENST00000431390 XDHP47989 1333 aa22.11■■□□□ 1.13
HMGN1-206ENST00000431390 DICER1Q9UPY3 1922 aaKnown RBP22.11■■□□□ 1.13
HMGN1-206ENST00000431390 HIP1O00291 1037 aa22.1■■□□□ 1.13
HMGN1-206ENST00000431390 PPEF1O14829 653 aaPredicted RBP22.1■■□□□ 1.13
HMGN1-206ENST00000431390 PHKA1P46020 1223 aa22.1■■□□□ 1.13
HMGN1-206ENST00000431390 KCNJ4P48050 445 aa22.1■■□□□ 1.13
HMGN1-206ENST00000431390 C2CD5Q86YS7 1000 aa22.1■■□□□ 1.13
HMGN1-206ENST00000431390 TTLL6Q8N841 843 aa22.1■■□□□ 1.13
HMGN1-206ENST00000431390 PAG1Q9NWQ8 432 aa22.1■■□□□ 1.13
HMGN1-206ENST00000431390 LEMD3Q9Y2U8 911 aa22.1■■□□□ 1.13
HMGN1-206ENST00000431390 GLTPD2A6NH11 291 aa22.09■■□□□ 1.13
HMGN1-206ENST00000431390 MFAP1P55081 439 aaKnown RBP22.09■■□□□ 1.13
HMGN1-206ENST00000431390 SP8Q8IXZ3 490 aa22.09■■□□□ 1.13
HMGN1-206ENST00000431390 ZNF804BA4D1E1 1349 aa22.09■■□□□ 1.13
HMGN1-206ENST00000431390 LTBP1Q14766 1721 aa22.08■■□□□ 1.13
HMGN1-206ENST00000431390 FSD1Q9BTV5 496 aa22.08■■□□□ 1.13
HMGN1-206ENST00000431390 PODXL2Q9NZ53 605 aa22.08■■□□□ 1.13
HMGN1-206ENST00000431390 ANKIB1Q9P2G1 1089 aa22.08■■□□□ 1.13
HMGN1-206ENST00000431390 FER1L6Q2WGJ9 1857 aa22.08■■□□□ 1.13
HMGN1-206ENST00000431390 VEGFAP15692 232 aaPredicted RBP22.08■■□□□ 1.12
HMGN1-206ENST00000431390 MCAMP43121 646 aa22.08■■□□□ 1.12
HMGN1-206ENST00000431390 CAVIN4Q5BKX8 364 aa22.08■■□□□ 1.12
HMGN1-206ENST00000431390 KBTBD3Q8NAB2 608 aa22.08■■□□□ 1.12
HMGN1-206ENST00000431390 ESYT1Q9BSJ8 1104 aa22.08■■□□□ 1.12
HMGN1-206ENST00000431390 ATP6V0A2Q9Y487 856 aa22.08■■□□□ 1.12
HMGN1-206ENST00000431390 NFKBIEO00221 500 aa22.07■■□□□ 1.12
HMGN1-206ENST00000431390 ZBTB22O15209 634 aa22.07■■□□□ 1.12
HMGN1-206ENST00000431390 SCARF1Q14162 830 aa22.07■■□□□ 1.12
HMGN1-206ENST00000431390 EDC3Q96F86 508 aaKnown RBP22.07■■□□□ 1.12
HMGN1-206ENST00000431390 DIAPH3Q9NSV4 1193 aa22.07■■□□□ 1.12
HMGN1-206ENST00000431390 NDUFB9Q9Y6M9 179 aa22.07■■□□□ 1.12
HMGN1-206ENST00000431390 GOLIM4O00461 696 aa22.06■■□□□ 1.12
HMGN1-206ENST00000431390 ATP2B4P23634 1241 aa22.06■■□□□ 1.12
HMGN1-206ENST00000431390 RUFY2Q8WXA3 655 aa22.06■■□□□ 1.12
HMGN1-206ENST00000431390 CNKSR1Q969H4 720 aa22.06■■□□□ 1.12
HMGN1-206ENST00000431390 ZNF622Q969S3 477 aaKnown RBP eCLIP22.06■■□□□ 1.12
HMGN1-206ENST00000431390 GNL3LQ9NVN8 582 aaKnown RBP22.06■■□□□ 1.12
HMGN1-206ENST00000431390 IRS2Q9Y4H2 1338 aa22.05■■□□□ 1.12
HMGN1-206ENST00000431390 REC8O95072 547 aa22.05■■□□□ 1.12
HMGN1-206ENST00000431390 ZAP70P43403 619 aa22.05■■□□□ 1.12
HMGN1-206ENST00000431390 BCAMP50895 628 aa22.05■■□□□ 1.12
HMGN1-206ENST00000431390 GPSM2P81274 684 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms