RNA–Protein interactions for RNA: ENST00000430548.5

AC004540.1-202, humanhuman

TSL 4

Gene AC004540.1, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-202ENST00000430548 USP17L1Q7RTZ2 530 aa23.9■■□□□ 1.42
AC004540.1-202ENST00000430548 CCDC102AQ96A19 550 aa23.9■■□□□ 1.42
AC004540.1-202ENST00000430548 MYOZ2Q9NPC6 264 aa23.9■■□□□ 1.42
AC004540.1-202ENST00000430548 WTIPA6NIX2 430 aaPredicted RBP23.89■■□□□ 1.41
AC004540.1-202ENST00000430548 USP17L8P0C7I0 530 aa23.89■■□□□ 1.41
AC004540.1-202ENST00000430548 CCT4P50991 539 aaKnown RBP23.89■■□□□ 1.41
AC004540.1-202ENST00000430548 SCARF1Q14162 830 aa23.89■■□□□ 1.41
AC004540.1-202ENST00000430548 UBE3BQ7Z3V4 1068 aa23.89■■□□□ 1.41
AC004540.1-202ENST00000430548 FANCIQ9NVI1 1328 aa23.88■■□□□ 1.41
AC004540.1-202ENST00000430548 CASP7P55210 303 aa23.88■■□□□ 1.41
AC004540.1-202ENST00000430548 FLIIQ13045 1269 aa23.88■■□□□ 1.41
AC004540.1-202ENST00000430548 MCOLN1Q9GZU1 580 aa23.88■■□□□ 1.41
AC004540.1-202ENST00000430548 SLC4A2P04920 1241 aa23.87■■□□□ 1.41
AC004540.1-202ENST00000430548 FKBP1BP68106 108 aa23.87■■□□□ 1.41
AC004540.1-202ENST00000430548 GCKRQ14397 625 aa23.87■■□□□ 1.41
AC004540.1-202ENST00000430548 DACT2Q5SW24 774 aa23.87■■□□□ 1.41
AC004540.1-202ENST00000430548 MYO3BQ8WXR4 1341 aa23.86■■□□□ 1.41
AC004540.1-202ENST00000430548 ZNF157P51786 506 aaPredicted RBP23.86■■□□□ 1.41
AC004540.1-202ENST00000430548 ARAP2Q8WZ64 1704 aa23.85■■□□□ 1.41
AC004540.1-202ENST00000430548 RGS19P49795 217 aa23.85■■□□□ 1.41
AC004540.1-202ENST00000430548 KIF23Q02241 960 aaPredicted RBP23.85■■□□□ 1.41
AC004540.1-202ENST00000430548 RASAL3Q86YV0 1011 aa23.85■■□□□ 1.41
AC004540.1-202ENST00000430548 COA1Q9GZY4 146 aa23.85■■□□□ 1.41
AC004540.1-202ENST00000430548 LEMD3Q9Y2U8 911 aa23.85■■□□□ 1.41
AC004540.1-202ENST00000430548 CSF1RP07333 972 aa23.84■■□□□ 1.41
AC004540.1-202ENST00000430548 IGHMBP2P38935 993 aaKnown RBP23.84■■□□□ 1.41
AC004540.1-202ENST00000430548 FAM161AQ3B820 660 aa23.84■■□□□ 1.41
AC004540.1-202ENST00000430548 STRIP1Q5VSL9 837 aa23.84■■□□□ 1.41
AC004540.1-202ENST00000430548 TXNRD3Q86VQ6 643 aa23.84■■□□□ 1.41
AC004540.1-202ENST00000430548 CCDC85CA6NKD9 419 aa23.83■■□□□ 1.41
AC004540.1-202ENST00000430548 ITGA6P23229 1130 aa23.83■■□□□ 1.41
AC004540.1-202ENST00000430548 LINS1Q8NG48 757 aa23.83■■□□□ 1.41
AC004540.1-202ENST00000430548 DNAAF4Q8WXU2 420 aa23.83■■□□□ 1.41
AC004540.1-202ENST00000430548 MYH16Q9H6N6 1097 aa23.83■■□□□ 1.41
AC004540.1-202ENST00000430548 FKBP5Q13451 457 aaPredicted RBP23.82■■□□□ 1.4
AC004540.1-202ENST00000430548 ZNF804BA4D1E1 1349 aa23.82■■□□□ 1.4
AC004540.1-202ENST00000430548 IRS2Q9Y4H2 1338 aa23.82■■□□□ 1.4
AC004540.1-202ENST00000430548 KLRK1P26718 216 aa23.81■■□□□ 1.4
AC004540.1-202ENST00000430548 MMP14P50281 582 aa23.81■■□□□ 1.4
AC004540.1-202ENST00000430548 NBPF9Q3BBW0 867 aa23.81■■□□□ 1.4
AC004540.1-202ENST00000430548 MXD3Q9BW11 206 aa23.81■■□□□ 1.4
AC004540.1-202ENST00000430548 ANKRD2Q9GZV1 360 aa23.81■■□□□ 1.4
AC004540.1-202ENST00000430548 RNF186Q9NXI6 227 aa23.81■■□□□ 1.4
AC004540.1-202ENST00000430548 COL1A1P02452 1464 aaPredicted RBP23.81■■□□□ 1.4
AC004540.1-202ENST00000430548 WNT10BO00744 389 aa23.8■■□□□ 1.4
AC004540.1-202ENST00000430548 VAMP4O75379 141 aa23.8■■□□□ 1.4
AC004540.1-202ENST00000430548 DGKZQ13574 1117 aa23.8■■□□□ 1.4
AC004540.1-202ENST00000430548 REM2Q8IYK8 340 aaPredicted RBP23.8■■□□□ 1.4
AC004540.1-202ENST00000430548 CSRNP1Q96S65 589 aa23.8■■□□□ 1.4
AC004540.1-202ENST00000430548 WDR63Q8IWG1 891 aa23.79■■□□□ 1.4
AC004540.1-202ENST00000430548 TNRC18O15417 2968 aaPredicted RBP23.79■■□□□ 1.4
AC004540.1-202ENST00000430548 OGFOD1Q8N543 542 aa23.78■■□□□ 1.4
AC004540.1-202ENST00000430548 MRS2Q9HD23 443 aa23.78■■□□□ 1.4
AC004540.1-202ENST00000430548 CHRNDQ07001 517 aa23.77■■□□□ 1.4
AC004540.1-202ENST00000430548 ZBED3Q96IU2 234 aaPredicted RBP23.77■■□□□ 1.4
AC004540.1-202ENST00000430548 MPHOSPH8Q99549 860 aa23.77■■□□□ 1.4
AC004540.1-202ENST00000430548 SCAF8Q9UPN6 1271 aaKnown RBP23.77■■□□□ 1.4
AC004540.1-202ENST00000430548 TRPA1O75762 1119 aa23.76■■□□□ 1.39
AC004540.1-202ENST00000430548 C15orf52Q6ZUT6 534 aaKnown RBP23.76■■□□□ 1.39
AC004540.1-202ENST00000430548 MLLT1Q03111 559 aaPredicted RBP23.75■■□□□ 1.39
AC004540.1-202ENST00000430548 TTLL5Q6EMB2 1281 aa23.75■■□□□ 1.39
AC004540.1-202ENST00000430548 MOB2Q70IA6 237 aa23.75■■□□□ 1.39
AC004540.1-202ENST00000430548 FBXW7Q969H0 707 aa23.75■■□□□ 1.39
AC004540.1-202ENST00000430548 OTOFQ9HC10 1997 aa23.74■■□□□ 1.39
AC004540.1-202ENST00000430548 ANKRD18BA2A2Z9 1011 aa23.74■■□□□ 1.39
AC004540.1-202ENST00000430548 SASH1O94885 1247 aa23.74■■□□□ 1.39
AC004540.1-202ENST00000430548 FOXO4P98177 505 aa23.74■■□□□ 1.39
AC004540.1-202ENST00000430548 EXOSC9Q06265 439 aaKnown RBP23.74■■□□□ 1.39
AC004540.1-202ENST00000430548 BEND3Q5T5X7 828 aa23.74■■□□□ 1.39
AC004540.1-202ENST00000430548 PRAMEF18Q5VWM3 479 aa23.73■■□□□ 1.39
AC004540.1-202ENST00000430548 CD209Q9NNX6 404 aa23.73■■□□□ 1.39
AC004540.1-202ENST00000430548 SSC5DA1L4H1 1573 aa23.73■■□□□ 1.39
AC004540.1-202ENST00000430548 GTF2IP78347 998 aa23.72■■□□□ 1.39
AC004540.1-202ENST00000430548 APOBEC3FQ8IUX4 373 aaKnown RBP23.72■■□□□ 1.39
AC004540.1-202ENST00000430548 KIAA0825Q8IV33 1275 aa23.72■■□□□ 1.39
AC004540.1-202ENST00000430548 SPINK5Q9NQ38 1064 aaPredicted RBP23.72■■□□□ 1.39
AC004540.1-202ENST00000430548 F6X3S4 739 aa23.71■■□□□ 1.39
AC004540.1-202ENST00000430548 UBE2Q2LH0YL09 131 aa23.71■■□□□ 1.39
AC004540.1-202ENST00000430548 KCNJ4P48050 445 aa23.71■■□□□ 1.39
AC004540.1-202ENST00000430548 HDAC9Q9UKV0 1011 aa23.71■■□□□ 1.39
AC004540.1-202ENST00000430548 NF2P35240 595 aa23.7■■□□□ 1.38
AC004540.1-202ENST00000430548 IFIT5Q13325 482 aaKnown RBP23.7■■□□□ 1.38
AC004540.1-202ENST00000430548 CERS5Q8N5B7 392 aa23.7■■□□□ 1.38
AC004540.1-202ENST00000430548 MTMR14Q8NCE2 650 aa23.7■■□□□ 1.38
AC004540.1-202ENST00000430548 SNAP23O00161 211 aa23.69■■□□□ 1.38
AC004540.1-202ENST00000430548 IL1R1P14778 569 aa23.69■■□□□ 1.38
AC004540.1-202ENST00000430548 TAF5LO75529 589 aa23.68■■□□□ 1.38
AC004540.1-202ENST00000430548 FKBP1AP62942 108 aaKnown RBP23.68■■□□□ 1.38
AC004540.1-202ENST00000430548 EPHA10Q5JZY3 1008 aa23.68■■□□□ 1.38
AC004540.1-202ENST00000430548 CTU1Q7Z7A3 348 aaKnown RBP23.68■■□□□ 1.38
AC004540.1-202ENST00000430548 PDE4DIPQ5VU43 2346 aa23.68■■□□□ 1.38
AC004540.1-202ENST00000430548 GRM8O00222 908 aa23.67■■□□□ 1.38
AC004540.1-202ENST00000430548 ANP32CO43423 234 aa23.67■■□□□ 1.38
AC004540.1-202ENST00000430548 TM4SF4P48230 202 aa23.67■■□□□ 1.38
AC004540.1-202ENST00000430548 NOM1Q5C9Z4 860 aaKnown RBP23.67■■□□□ 1.38
AC004540.1-202ENST00000430548 TTLL12Q14166 644 aaPredicted RBP23.66■■□□□ 1.38
AC004540.1-202ENST00000430548 LDLRAD1Q5T700 205 aa23.66■■□□□ 1.38
AC004540.1-202ENST00000430548 LMBR1LQ6UX01 489 aa23.66■■□□□ 1.38
AC004540.1-202ENST00000430548 ZNF804AQ7Z570 1209 aa23.66■■□□□ 1.38
AC004540.1-202ENST00000430548 HELBQ8NG08 1087 aaPredicted RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms