RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 CCDC57Q2TAC2 916 aa11.76□□□□□ -0.53
NUP50-206ENST00000422489 KIF4BQ2VIQ3 1234 aa11.76□□□□□ -0.53
NUP50-206ENST00000422489 EPHA10Q5JZY3 1008 aa11.76□□□□□ -0.53
NUP50-206ENST00000422489 MRPL50Q8N5N7 158 aaKnown RBP11.76□□□□□ -0.53
NUP50-206ENST00000422489 CDCA7LQ96GN5 454 aa11.76□□□□□ -0.53
NUP50-206ENST00000422489 CAPNS2Q96L46 248 aa11.76□□□□□ -0.53
NUP50-206ENST00000422489 MXD3Q9BW11 206 aa11.76□□□□□ -0.53
NUP50-206ENST00000422489 FOXN1O15353 648 aa11.75□□□□□ -0.53
NUP50-206ENST00000422489 ALDH1L1O75891 902 aa11.75□□□□□ -0.53
NUP50-206ENST00000422489 USP17L8P0C7I0 530 aa11.75□□□□□ -0.53
NUP50-206ENST00000422489 ECE1P42892 770 aa11.75□□□□□ -0.53
NUP50-206ENST00000422489 CHRNDQ07001 517 aa11.75□□□□□ -0.53
NUP50-206ENST00000422489 SCARF1Q14162 830 aa11.75□□□□□ -0.53
NUP50-206ENST00000422489 KRT26Q7Z3Y9 468 aa11.75□□□□□ -0.53
NUP50-206ENST00000422489 TXNRD3Q86VQ6 643 aa11.75□□□□□ -0.53
NUP50-206ENST00000422489 TNS4Q8IZW8 715 aa11.75□□□□□ -0.53
NUP50-206ENST00000422489 AGBL3Q8NEM8 1001 aa11.75□□□□□ -0.53
NUP50-206ENST00000422489 ZNF594Q96JF6 807 aaPredicted RBP11.75□□□□□ -0.53
NUP50-206ENST00000422489 COA1Q9GZY4 146 aa11.75□□□□□ -0.53
NUP50-206ENST00000422489 CNNM1Q9NRU3 951 aa11.75□□□□□ -0.53
NUP50-206ENST00000422489 TLL2Q9Y6L7 1015 aa11.75□□□□□ -0.53
NUP50-206ENST00000422489 ADM5C9JUS6 153 aa11.74□□□□□ -0.53
NUP50-206ENST00000422489 SNAP23O00161 211 aa11.74□□□□□ -0.53
NUP50-206ENST00000422489 KCNA4P22459 653 aa11.74□□□□□ -0.53
NUP50-206ENST00000422489 LDHAL6AQ6ZMR3 332 aa11.74□□□□□ -0.53
NUP50-206ENST00000422489 SULF1Q8IWU6 871 aa11.74□□□□□ -0.53
NUP50-206ENST00000422489 SSH1Q8WYL5 1049 aa11.74□□□□□ -0.53
NUP50-206ENST00000422489 MYOZ2Q9NPC6 264 aa11.74□□□□□ -0.53
NUP50-206ENST00000422489 ASTN2O75129 1339 aaPredicted RBP11.74□□□□□ -0.53
NUP50-206ENST00000422489 ADAMTSL1Q8N6G6 1762 aa11.74□□□□□ -0.53
NUP50-206ENST00000422489 AOC2O75106 756 aa11.73□□□□□ -0.53
NUP50-206ENST00000422489 CAPN15O75808 1086 aa11.73□□□□□ -0.53
NUP50-206ENST00000422489 KLRK1P26718 216 aa11.73□□□□□ -0.53
NUP50-206ENST00000422489 CTCFP49711 727 aaPredicted RBP11.73□□□□□ -0.53
NUP50-206ENST00000422489 GTF2IP78347 998 aa11.73□□□□□ -0.53
NUP50-206ENST00000422489 MAP2K1Q02750 393 aaPredicted RBP11.73□□□□□ -0.53
NUP50-206ENST00000422489 ANGEL2Q5VTE6 544 aaKnown RBP11.73□□□□□ -0.53
NUP50-206ENST00000422489 TTLL5Q6EMB2 1281 aa11.73□□□□□ -0.53
NUP50-206ENST00000422489 SAPCD2Q86UD0 394 aa11.73□□□□□ -0.53
NUP50-206ENST00000422489 OGFOD1Q8N543 542 aa11.73□□□□□ -0.53
NUP50-206ENST00000422489 C2orf69Q8N8R5 385 aa11.73□□□□□ -0.53
NUP50-206ENST00000422489 SUCLG2Q96I99 432 aa11.73□□□□□ -0.53
NUP50-206ENST00000422489 WBP1LQ9NX94 342 aa11.73□□□□□ -0.53
NUP50-206ENST00000422489 GGA3Q9NZ52 723 aa11.73□□□□□ -0.53
NUP50-206ENST00000422489 MED23Q9ULK4 1368 aa11.73□□□□□ -0.53
NUP50-206ENST00000422489 LRRC37AA6NMS7 1700 aa11.72□□□□□ -0.53
NUP50-206ENST00000422489 CCER2I3L3R5 266 aa11.72□□□□□ -0.53
NUP50-206ENST00000422489 NBPF7P0C2Y1 421 aaPredicted RBP11.72□□□□□ -0.53
NUP50-206ENST00000422489 HUNKP57058 714 aa11.72□□□□□ -0.53
NUP50-206ENST00000422489 ZNF280AP59817 542 aaPredicted RBP11.72□□□□□ -0.53
NUP50-206ENST00000422489 DACT2Q5SW24 774 aa11.72□□□□□ -0.53
NUP50-206ENST00000422489 STRIP1Q5VSL9 837 aa11.72□□□□□ -0.53
NUP50-206ENST00000422489 GMLQ99445 158 aa11.72□□□□□ -0.53
NUP50-206ENST00000422489 BEGAINQ9BUH8 593 aa11.72□□□□□ -0.53
NUP50-206ENST00000422489 SCAF8Q9UPN6 1271 aaKnown RBP11.72□□□□□ -0.53
NUP50-206ENST00000422489 LBX1P52954 281 aa11.71□□□□□ -0.53
NUP50-206ENST00000422489 GBA2Q9HCG7 927 aaPredicted RBP11.71□□□□□ -0.53
NUP50-206ENST00000422489 CD209Q9NNX6 404 aa11.71□□□□□ -0.53
NUP50-206ENST00000422489 SMC4Q9NTJ3 1288 aa11.71□□□□□ -0.53
NUP50-206ENST00000422489 PTPRCP08575 1304 aa11.7□□□□□ -0.54
NUP50-206ENST00000422489 MAP2K2P36507 400 aa11.7□□□□□ -0.54
NUP50-206ENST00000422489 NBPF9Q3BBW0 867 aa11.7□□□□□ -0.54
NUP50-206ENST00000422489 KIAA0825Q8IV33 1275 aa11.7□□□□□ -0.54
NUP50-206ENST00000422489 CDCA5Q96FF9 252 aa11.7□□□□□ -0.54
NUP50-206ENST00000422489 PUS3Q9BZE2 481 aaKnown RBP11.7□□□□□ -0.54
NUP50-206ENST00000422489 HDAC9Q9UKV0 1011 aa11.7□□□□□ -0.54
NUP50-206ENST00000422489 MYO3BQ8WXR4 1341 aa11.69□□□□□ -0.54
NUP50-206ENST00000422489 ALDH1L2Q3SY69 923 aa11.69□□□□□ -0.54
NUP50-206ENST00000422489 PRAMEF18Q5VWM3 479 aa11.69□□□□□ -0.54
NUP50-206ENST00000422489 ZNF804AQ7Z570 1209 aa11.69□□□□□ -0.54
NUP50-206ENST00000422489 KAZALD1Q96I82 304 aa11.69□□□□□ -0.54
NUP50-206ENST00000422489 BICC1Q9H694 974 aaKnown RBP11.69□□□□□ -0.54
NUP50-206ENST00000422489 NOB1Q9ULX3 412 aaKnown RBP11.69□□□□□ -0.54
NUP50-206ENST00000422489 JAG2Q9Y219 1238 aa11.69□□□□□ -0.54
NUP50-206ENST00000422489 F8W031 263 aaPredicted RBP11.68□□□□□ -0.54
NUP50-206ENST00000422489 SASH1O94885 1247 aa11.68□□□□□ -0.54
NUP50-206ENST00000422489 ZNF157P51786 506 aaPredicted RBP11.68□□□□□ -0.54
NUP50-206ENST00000422489 RGMBQ6NW40 437 aa11.68□□□□□ -0.54
NUP50-206ENST00000422489 TRMT2AQ8IZ69 625 aaKnown RBP11.68□□□□□ -0.54
NUP50-206ENST00000422489 HHIPL1Q96JK4 782 aa11.68□□□□□ -0.54
NUP50-206ENST00000422489 PRDM10Q9NQV6 1147 aa11.68□□□□□ -0.54
NUP50-206ENST00000422489 UTYO14607 1347 aa11.67□□□□□ -0.54
NUP50-206ENST00000422489 WNT10BO00744 389 aa11.67□□□□□ -0.54
NUP50-206ENST00000422489 HSPA8P11142 646 aaKnown RBP11.67□□□□□ -0.54
NUP50-206ENST00000422489 GYG1P46976 350 aa11.67□□□□□ -0.54
NUP50-206ENST00000422489 TTLL12Q14166 644 aaPredicted RBP11.67□□□□□ -0.54
NUP50-206ENST00000422489 DLGAP5Q15398 846 aa11.67□□□□□ -0.54
NUP50-206ENST00000422489 C15orf52Q6ZUT6 534 aaKnown RBP11.67□□□□□ -0.54
NUP50-206ENST00000422489 CCDC102AQ96A19 550 aa11.67□□□□□ -0.54
NUP50-206ENST00000422489 USP44Q9H0E7 712 aa11.67□□□□□ -0.54
NUP50-206ENST00000422489 TSKSQ9UJT2 592 aa11.67□□□□□ -0.54
NUP50-206ENST00000422489 MROH5Q6ZUA9 1318 aa11.66□□□□□ -0.54
NUP50-206ENST00000422489 UBE2Q2LH0YL09 131 aa11.66□□□□□ -0.54
NUP50-206ENST00000422489 IL1R1P14778 569 aa11.66□□□□□ -0.54
NUP50-206ENST00000422489 HIBADHP31937 336 aaKnown RBP11.66□□□□□ -0.54
NUP50-206ENST00000422489 RBM5P52756 815 aaKnown RBP eCLIP11.66□□□□□ -0.54
NUP50-206ENST00000422489 KIF23Q02241 960 aaPredicted RBP11.66□□□□□ -0.54
NUP50-206ENST00000422489 NOGQ13253 232 aa11.66□□□□□ -0.54
NUP50-206ENST00000422489 PRKG1Q13976 671 aa11.66□□□□□ -0.54
NUP50-206ENST00000422489 UBE4AQ14139 1066 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms