RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 TAF5LO75529 589 aa19.26■□□□□ 0.67
NUP50-204ENST00000417702 CDC37L1Q7L3B6 337 aa19.26■□□□□ 0.67
NUP50-204ENST00000417702 FBXW7Q969H0 707 aa19.26■□□□□ 0.67
NUP50-204ENST00000417702 TRAF5O00463 557 aa19.25■□□□□ 0.67
NUP50-204ENST00000417702 PLIN1O60240 522 aa19.25■□□□□ 0.67
NUP50-204ENST00000417702 KLRK1P26718 216 aa19.25■□□□□ 0.67
NUP50-204ENST00000417702 KIF4BQ2VIQ3 1234 aa19.25■□□□□ 0.67
NUP50-204ENST00000417702 RABL6Q3YEC7 729 aaPredicted RBP19.25■□□□□ 0.67
NUP50-204ENST00000417702 ABT1Q9ULW3 272 aaKnown RBP19.25■□□□□ 0.67
NUP50-204ENST00000417702 KIF16BQ96L93 1317 aa19.25■□□□□ 0.67
NUP50-204ENST00000417702 CNTNAP1P78357 1384 aa19.24■□□□□ 0.67
NUP50-204ENST00000417702 USP17L8P0C7I0 530 aa19.24■□□□□ 0.67
NUP50-204ENST00000417702 STRIP1Q5VSL9 837 aa19.24■□□□□ 0.67
NUP50-204ENST00000417702 GLIS2Q9BZE0 524 aaPredicted RBP19.24■□□□□ 0.67
NUP50-204ENST00000417702 ZNF609O15014 1411 aa19.24■□□□□ 0.67
NUP50-204ENST00000417702 EGFRP00533 1210 aa19.23■□□□□ 0.67
NUP50-204ENST00000417702 ZNF280AP59817 542 aaPredicted RBP19.23■□□□□ 0.67
NUP50-204ENST00000417702 FMR1Q06787 632 aaKnown RBP eCLIP19.23■□□□□ 0.67
NUP50-204ENST00000417702 TTLL5Q6EMB2 1281 aa19.23■□□□□ 0.67
NUP50-204ENST00000417702 C15orf52Q6ZUT6 534 aaKnown RBP19.23■□□□□ 0.67
NUP50-204ENST00000417702 ANKRD44Q8N8A2 993 aa19.23■□□□□ 0.67
NUP50-204ENST00000417702 GMLQ99445 158 aa19.23■□□□□ 0.67
NUP50-204ENST00000417702 MYO3BQ8WXR4 1341 aa19.23■□□□□ 0.67
NUP50-204ENST00000417702 SNAP23O00161 211 aa19.22■□□□□ 0.67
NUP50-204ENST00000417702 DEFB115Q30KQ5 88 aa19.22■□□□□ 0.67
NUP50-204ENST00000417702 DACT2Q5SW24 774 aa19.22■□□□□ 0.67
NUP50-204ENST00000417702 ZNF804AQ7Z570 1209 aa19.22■□□□□ 0.67
NUP50-204ENST00000417702 ARHGAP45Q92619 1136 aa19.22■□□□□ 0.67
NUP50-204ENST00000417702 DCPSQ96C86 337 aaKnown RBP19.22■□□□□ 0.67
NUP50-204ENST00000417702 CD209Q9NNX6 404 aa19.22■□□□□ 0.67
NUP50-204ENST00000417702 HDAC5Q9UQL6 1122 aa19.22■□□□□ 0.67
NUP50-204ENST00000417702 IPO8O15397 1037 aaKnown RBP19.21■□□□□ 0.67
NUP50-204ENST00000417702 CELF2O95319 508 aaKnown RBP19.21■□□□□ 0.67
NUP50-204ENST00000417702 UBTFL1P0CB47 393 aaPredicted RBP19.21■□□□□ 0.67
NUP50-204ENST00000417702 KRT26Q7Z3Y9 468 aa19.21■□□□□ 0.67
NUP50-204ENST00000417702 USP48Q86UV5 1035 aa19.21■□□□□ 0.67
NUP50-204ENST00000417702 OGFOD1Q8N543 542 aa19.21■□□□□ 0.67
NUP50-204ENST00000417702 PUS3Q9BZE2 481 aaKnown RBP19.21■□□□□ 0.67
NUP50-204ENST00000417702 MROH5Q6ZUA9 1318 aa19.21■□□□□ 0.67
NUP50-204ENST00000417702 RASSF10A6NK89 507 aa19.2■□□□□ 0.66
NUP50-204ENST00000417702 GTF2IP78347 998 aa19.2■□□□□ 0.66
NUP50-204ENST00000417702 UBE4AQ14139 1066 aa19.2■□□□□ 0.66
NUP50-204ENST00000417702 CST9Q5W186 159 aa19.2■□□□□ 0.66
NUP50-204ENST00000417702 MYOZ2Q9NPC6 264 aa19.2■□□□□ 0.66
NUP50-204ENST00000417702 RIPOR2Q9Y4F9 1068 aa19.2■□□□□ 0.66
NUP50-204ENST00000417702 PSME4Q14997 1843 aa19.2■□□□□ 0.66
NUP50-204ENST00000417702 VEGFBP49765 207 aa19.19■□□□□ 0.66
NUP50-204ENST00000417702 MMP14P50281 582 aa19.19■□□□□ 0.66
NUP50-204ENST00000417702 SULF1Q8IWU6 871 aa19.19■□□□□ 0.66
NUP50-204ENST00000417702 MXD3Q9BW11 206 aa19.19■□□□□ 0.66
NUP50-204ENST00000417702 ZNF408Q9H9D4 720 aa19.19■□□□□ 0.66
NUP50-204ENST00000417702 IRS2Q9Y4H2 1338 aa19.19■□□□□ 0.66
NUP50-204ENST00000417702 SCARF1Q14162 830 aa19.18■□□□□ 0.66
NUP50-204ENST00000417702 METTL24Q5JXM2 366 aa19.18■□□□□ 0.66
NUP50-204ENST00000417702 PAXIP1Q6ZW49 1069 aaPredicted RBP19.18■□□□□ 0.66
NUP50-204ENST00000417702 GGA3Q9NZ52 723 aa19.18■□□□□ 0.66
NUP50-204ENST00000417702 HDAC9Q9UKV0 1011 aa19.18■□□□□ 0.66
NUP50-204ENST00000417702 TRPM7Q96QT4 1865 aa19.18■□□□□ 0.66
NUP50-204ENST00000417702 IL1R1P14778 569 aa19.17■□□□□ 0.66
NUP50-204ENST00000417702 LRRC24Q50LG9 513 aa19.17■□□□□ 0.66
NUP50-204ENST00000417702 FRAT1Q92837 279 aaPredicted RBP19.17■□□□□ 0.66
NUP50-204ENST00000417702 TLL2Q9Y6L7 1015 aa19.17■□□□□ 0.66
NUP50-204ENST00000417702 BCAR3O75815 825 aa19.16■□□□□ 0.66
NUP50-204ENST00000417702 HSPA1AP0DMV8 641 aaKnown RBP19.16■□□□□ 0.66
NUP50-204ENST00000417702 HSPA1BP0DMV9 641 aaKnown RBP19.16■□□□□ 0.66
NUP50-204ENST00000417702 ECE1P42892 770 aa19.16■□□□□ 0.66
NUP50-204ENST00000417702 INTS3Q68E01 1043 aaKnown RBP19.16■□□□□ 0.66
NUP50-204ENST00000417702 KLHDC4Q8TBB5 520 aa19.16■□□□□ 0.66
NUP50-204ENST00000417702 ADM5C9JUS6 153 aa19.15■□□□□ 0.66
NUP50-204ENST00000417702 HIBADHP31937 336 aaKnown RBP19.15■□□□□ 0.66
NUP50-204ENST00000417702 ANGEL2Q5VTE6 544 aaKnown RBP19.15■□□□□ 0.66
NUP50-204ENST00000417702 ATF7IPQ6VMQ6 1270 aa19.15■□□□□ 0.66
NUP50-204ENST00000417702 KIAA0825Q8IV33 1275 aa19.15■□□□□ 0.66
NUP50-204ENST00000417702 ASTN2O75129 1339 aaPredicted RBP19.15■□□□□ 0.66
NUP50-204ENST00000417702 ZBED9Q6R2W3 1325 aa19.15■□□□□ 0.66
NUP50-204ENST00000417702 POLR2AP24928 1970 aaKnown RBP19.14■□□□□ 0.65
NUP50-204ENST00000417702 GNAI3P08754 354 aa19.14■□□□□ 0.65
NUP50-204ENST00000417702 GYG1P46976 350 aa19.14■□□□□ 0.65
NUP50-204ENST00000417702 SAPCD2Q86UD0 394 aa19.14■□□□□ 0.65
NUP50-204ENST00000417702 VPS37DQ86XT2 251 aa19.14■□□□□ 0.65
NUP50-204ENST00000417702 LRRFIP2Q9Y608 721 aaKnown RBP19.14■□□□□ 0.65
NUP50-204ENST00000417702 WDR33Q9C0J8 1336 aaKnown RBP19.14■□□□□ 0.65
NUP50-204ENST00000417702 A0A1B0GUL6 1792 aa19.14■□□□□ 0.65
NUP50-204ENST00000417702 EYA2O00167 538 aa19.13■□□□□ 0.65
NUP50-204ENST00000417702 SASH1O94885 1247 aa19.13■□□□□ 0.65
NUP50-204ENST00000417702 PDE8BO95263 885 aa19.13■□□□□ 0.65
NUP50-204ENST00000417702 TRIM27P14373 513 aa19.13■□□□□ 0.65
NUP50-204ENST00000417702 RFX5P48382 616 aaPredicted RBP19.13■□□□□ 0.65
NUP50-204ENST00000417702 DLK2Q6UY11 383 aa19.13■□□□□ 0.65
NUP50-204ENST00000417702 FAM84BQ96KN1 310 aaPredicted RBP19.13■□□□□ 0.65
NUP50-204ENST00000417702 CAPNS2Q96L46 248 aa19.13■□□□□ 0.65
NUP50-204ENST00000417702 MEIS3Q99687 375 aa19.13■□□□□ 0.65
NUP50-204ENST00000417702 PITPNM2Q9BZ72 1349 aa19.13■□□□□ 0.65
NUP50-204ENST00000417702 FKBP1AP62942 108 aaKnown RBP19.12■□□□□ 0.65
NUP50-204ENST00000417702 PTPN12Q05209 780 aaKnown RBP19.12■□□□□ 0.65
NUP50-204ENST00000417702 GRM1Q13255 1194 aa19.12■□□□□ 0.65
NUP50-204ENST00000417702 NBPF9Q3BBW0 867 aa19.12■□□□□ 0.65
NUP50-204ENST00000417702 CAVIN4Q5BKX8 364 aa19.12■□□□□ 0.65
NUP50-204ENST00000417702 ZKSCAN2Q63HK3 967 aa19.12■□□□□ 0.65
NUP50-204ENST00000417702 C2orf69Q8N8R5 385 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms