RNA–Protein interactions for RNA: ENST00000408541.1

RNU6ATAC11P-201, Transcript of RNA, U6atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU6ATAC11P, Length 125 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC11P-201ENST00000408541 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.38□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 ARHGEF12Q9NZN5 1544 aa0.38□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 NISCHQ9Y2I1 1504 aa0.38□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 NPHP4O75161 1426 aaPredicted RBP0.38□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 CD109Q6YHK3 1445 aa0.38□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 SPATA31E1Q6ZUB1 1445 aa0.38□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 SSH2Q76I76 1423 aa0.38□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 SALL3Q9BXA9 1300 aa0.38□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 ITSN2Q9NZM3 1697 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 CABIN1Q9Y6J0 2220 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 MAST1Q9Y2H9 1570 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 PXDNQ92626 1479 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 MAGI1Q96QZ7 1491 aaPredicted RBP0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 TMEM221A6NGB7 291 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 FIGNL2A6NMB9 653 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 H7C1D1 291 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 M0R296 226 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 ERC2O15083 957 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 FMNL1O95466 1100 aaPredicted RBP0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 TBC1D8O95759 1140 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 F12P00748 615 aaPredicted RBP0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 LPOP22079 712 aaPredicted RBP0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 ITGB7P26010 798 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 COL8A1P27658 744 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 ADSSP30520 456 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 DCTP40126 519 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 ADCY7P51828 1080 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 HAP1P54257 671 aaPredicted RBP0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 TROAPQ12815 778 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 NOGQ13253 232 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 POLA2Q14181 598 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 NAA30Q147X3 362 aaPredicted RBP0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 SLC35G1Q2M3R5 365 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 NBPF9Q3BBW0 867 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 EAPPQ56P03 285 aaPredicted RBP0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 MAP1SQ66K74 1059 aaPredicted RBP0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 KLHDC10Q6PID8 442 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 BMP8AQ7Z5Y6 402 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 PROSER2Q86WR7 435 aaPredicted RBP0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 LDHDQ86WU2 507 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 PROSER1Q86XN7 944 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 MB21D1Q8N884 522 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 BHLHE22Q8NFJ8 381 aaPredicted RBP0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 SH3RF3Q8TEJ3 882 aaPredicted RBP0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 SORCS1Q8WY21 1168 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 GATA6Q92908 595 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 SHISA4Q96DD7 197 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 LCORQ96JN0 433 aaPredicted RBP0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 PRDM12Q9H4Q4 367 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 GSX1Q9H4S2 264 aaPredicted RBP0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 DDX21Q9NR30 783 aaKnown RBP eCLIP0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 DKK3Q9UBP4 350 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 SERGEFQ9UGK8 458 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 USP20Q9Y2K6 914 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 WBP11Q9Y2W2 641 aaKnown RBP0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 CD2APQ9Y5K6 639 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 TLL2Q9Y6L7 1015 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 CSNK1G3Q9Y6M4 447 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 STARD9Q9P2P6 4700 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 LRRC37A2A6NM11 1700 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 SIGLEC1Q9BZZ2 1709 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 PEAK1Q9H792 1746 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 SETD1BQ9UPS6 1966 aaKnown RBP0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 URB2Q14146 1524 aaKnown RBP0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 AKNAQ7Z591 1439 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 PRG4Q92954 1404 aaPredicted RBP0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 TTBK1Q5TCY1 1321 aaPredicted RBP0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 LRP2P98164 4655 aa0.37□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 PRKDCP78527 4128 aaKnown RBP0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 TICRRQ7Z2Z1 1910 aa0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 COL5A1P20908 1838 aaPredicted RBP0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 ERVK-7P63135 1459 aa0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 PKD1L3Q7Z443 1732 aa0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 IGF1RP08069 1367 aa0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 SVILO95425 2214 aa0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 SHTN1A0MZ66 631 aa0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 A1L4Q6 167 aa0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 RNF103O00237 685 aa0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 CLDN9O95484 217 aa0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 CD99P14209 185 aa0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 CD6P30203 668 aa0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 HNRNPA3P51991 378 aaKnown RBP0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 MAP3K9P80192 1104 aa0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 SMAD3P84022 425 aaKnown RBP0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 SRSF2Q01130 221 aaKnown RBP0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 KIF23Q02241 960 aaPredicted RBP0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 LMNB2Q03252 620 aa0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 LTBQ06643 244 aa0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 PMPCAQ10713 525 aa0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 ADGRE1Q14246 886 aa0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 HIC1Q14526 733 aa0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 PLECQ15149 4684 aaKnown RBP0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 VPS72Q15906 364 aa0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 PDCD2Q16342 344 aaPredicted RBP0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 MIDNQ504T8 468 aa0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 LELP1Q5T871 98 aa0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 C1QL3Q5VWW1 255 aa0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 MSL1Q68DK7 614 aa0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 DPY19L2Q6NUT2 758 aa0.36□□□□□ -2.35
RNU6ATAC11P-201ENST00000408541 ESRP1Q6NXG1 681 aaKnown RBP0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms