RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 BHLHE41Q9C0J9 482 aaPredicted RBP10.66□□□□□ -0.7
PTPN12-202ENST00000407343 SPG7Q9UQ90 795 aa10.66□□□□□ -0.7
PTPN12-202ENST00000407343 GADD45BO75293 160 aaPredicted RBP10.65□□□□□ -0.7
PTPN12-202ENST00000407343 EIF2AK2P19525 551 aaKnown RBP10.65□□□□□ -0.7
PTPN12-202ENST00000407343 GRIK5Q16478 980 aa10.65□□□□□ -0.7
PTPN12-202ENST00000407343 C3orf58Q8NDZ4 430 aa10.65□□□□□ -0.7
PTPN12-202ENST00000407343 NXPE3Q969Y0 559 aa10.65□□□□□ -0.7
PTPN12-202ENST00000407343 FRRS1LQ9P0K9 344 aa10.65□□□□□ -0.7
PTPN12-202ENST00000407343 GIPC1O14908 333 aa10.64□□□□□ -0.71
PTPN12-202ENST00000407343 SORBS3O60504 671 aa10.64□□□□□ -0.71
PTPN12-202ENST00000407343 CELA2BP08218 269 aaPredicted RBP10.64□□□□□ -0.71
PTPN12-202ENST00000407343 HOXB4P17483 251 aaPredicted RBP10.64□□□□□ -0.71
PTPN12-202ENST00000407343 GRIA4P48058 902 aa10.64□□□□□ -0.71
PTPN12-202ENST00000407343 PLD4Q96BZ4 506 aa10.64□□□□□ -0.71
PTPN12-202ENST00000407343 POP1Q99575 1024 aaKnown RBP10.64□□□□□ -0.71
PTPN12-202ENST00000407343 EHD4Q9H223 541 aa10.64□□□□□ -0.71
PTPN12-202ENST00000407343 LIN7BQ9HAP6 207 aa10.64□□□□□ -0.71
PTPN12-202ENST00000407343 LRRC4BQ9NT99 713 aa10.64□□□□□ -0.71
PTPN12-202ENST00000407343 METTL12A8MUP2 240 aa10.63□□□□□ -0.71
PTPN12-202ENST00000407343 ALBP02768 609 aa10.63□□□□□ -0.71
PTPN12-202ENST00000407343 LORP23490 312 aaPredicted RBP10.63□□□□□ -0.71
PTPN12-202ENST00000407343 PSAPL1Q6NUJ1 521 aa10.63□□□□□ -0.71
PTPN12-202ENST00000407343 EDARADDQ8WWZ3 215 aa10.63□□□□□ -0.71
PTPN12-202ENST00000407343 TTC9Q92623 222 aa10.63□□□□□ -0.71
PTPN12-202ENST00000407343 BACH2Q9BYV9 841 aa10.63□□□□□ -0.71
PTPN12-202ENST00000407343 SMG9Q9H0W8 520 aaKnown RBP10.63□□□□□ -0.71
PTPN12-202ENST00000407343 E9PSI1 815 aa10.62□□□□□ -0.71
PTPN12-202ENST00000407343 GHRHP01286 108 aa10.62□□□□□ -0.71
PTPN12-202ENST00000407343 BCRP11274 1271 aa10.62□□□□□ -0.71
PTPN12-202ENST00000407343 GALNT6Q8NCL4 622 aa10.62□□□□□ -0.71
PTPN12-202ENST00000407343 SPACA7Q96KW9 195 aa10.62□□□□□ -0.71
PTPN12-202ENST00000407343 SRCIN1Q9C0H9 1055 aa10.62□□□□□ -0.71
PTPN12-202ENST00000407343 PDE2AO00408 941 aaPredicted RBP10.61□□□□□ -0.71
PTPN12-202ENST00000407343 EIF4BP23588 611 aaKnown RBP10.61□□□□□ -0.71
PTPN12-202ENST00000407343 ZNF385CQ66K41 422 aaPredicted RBP10.61□□□□□ -0.71
PTPN12-202ENST00000407343 BTBD6Q96KE9 485 aa10.61□□□□□ -0.71
PTPN12-202ENST00000407343 TRIM33Q9UPN9 1127 aa10.61□□□□□ -0.71
PTPN12-202ENST00000407343 TMEM238LA0A1B0GVL6 79 aa10.6□□□□□ -0.71
PTPN12-202ENST00000407343 USP17L7P0C7H9 530 aa10.6□□□□□ -0.71
PTPN12-202ENST00000407343 ITPKAP23677 461 aa10.6□□□□□ -0.71
PTPN12-202ENST00000407343 COL9A3Q14050 684 aaPredicted RBP10.6□□□□□ -0.71
PTPN12-202ENST00000407343 SPRED3Q2MJR0 410 aa10.6□□□□□ -0.71
PTPN12-202ENST00000407343 CHSY3Q70JA7 882 aa10.6□□□□□ -0.71
PTPN12-202ENST00000407343 ILDR2Q71H61 639 aa10.6□□□□□ -0.71
PTPN12-202ENST00000407343 MICALL1Q8N3F8 863 aa10.6□□□□□ -0.71
PTPN12-202ENST00000407343 FAM8A1Q9UBU6 413 aa10.6□□□□□ -0.71
PTPN12-202ENST00000407343 VTI1BQ9UEU0 232 aa10.6□□□□□ -0.71
PTPN12-202ENST00000407343 WIPF1O43516 503 aa10.59□□□□□ -0.71
PTPN12-202ENST00000407343 CEP135Q66GS9 1140 aa10.59□□□□□ -0.71
PTPN12-202ENST00000407343 ELMSAN1Q6PJG2 1045 aa10.59□□□□□ -0.71
PTPN12-202ENST00000407343 C8orf86Q6ZUL3 223 aa10.59□□□□□ -0.71
PTPN12-202ENST00000407343 CRELD1Q96HD1 420 aa10.59□□□□□ -0.71
PTPN12-202ENST00000407343 ADAM19Q9H013 955 aa10.59□□□□□ -0.71
PTPN12-202ENST00000407343 TRAK1Q9UPV9 953 aa10.59□□□□□ -0.71
PTPN12-202ENST00000407343 ALAS2P22557 587 aa10.58□□□□□ -0.72
PTPN12-202ENST00000407343 BAG6P46379 1132 aa10.58□□□□□ -0.72
PTPN12-202ENST00000407343 NUDT8Q8WV74 236 aa10.58□□□□□ -0.72
PTPN12-202ENST00000407343 MRS2Q9HD23 443 aa10.58□□□□□ -0.72
PTPN12-202ENST00000407343 SOX13Q9UN79 622 aa10.58□□□□□ -0.72
PTPN12-202ENST00000407343 AFF1P51825 1210 aaKnown RBP10.57□□□□□ -0.72
PTPN12-202ENST00000407343 FCGRTP55899 365 aa10.57□□□□□ -0.72
PTPN12-202ENST00000407343 TSNAXIP1Q2TAA8 658 aa10.57□□□□□ -0.72
PTPN12-202ENST00000407343 MEI1Q5TIA1 1274 aa10.57□□□□□ -0.72
PTPN12-202ENST00000407343 KANK3Q6NY19 840 aa10.57□□□□□ -0.72
PTPN12-202ENST00000407343 ANKRD24Q8TF21 1146 aa10.57□□□□□ -0.72
PTPN12-202ENST00000407343 MUC3BQ9H195 1237 aa10.57□□□□□ -0.72
PTPN12-202ENST00000407343 RBSNQ9H1K0 784 aa10.57□□□□□ -0.72
PTPN12-202ENST00000407343 USP31Q70CQ4 1352 aa10.56□□□□□ -0.72
PTPN12-202ENST00000407343 A0A096LPE4 126 aa10.56□□□□□ -0.72
PTPN12-202ENST00000407343 A0A1W2PPZ6 126 aa10.56□□□□□ -0.72
PTPN12-202ENST00000407343 SMNDC1O75940 238 aaKnown RBP eCLIP10.56□□□□□ -0.72
PTPN12-202ENST00000407343 ARHGEF15O94989 841 aa10.56□□□□□ -0.72
PTPN12-202ENST00000407343 MAP3K10Q02779 954 aa10.56□□□□□ -0.72
PTPN12-202ENST00000407343 PTPN12Q05209 780 aaKnown RBP10.56□□□□□ -0.72
PTPN12-202ENST00000407343 VN1R5Q7Z5H4 357 aa10.56□□□□□ -0.72
PTPN12-202ENST00000407343 PRDM6Q9NQX0 595 aa10.56□□□□□ -0.72
PTPN12-202ENST00000407343 M0R082 166 aa10.55□□□□□ -0.72
PTPN12-202ENST00000407343 RGS9O75916 674 aaPredicted RBP10.55□□□□□ -0.72
PTPN12-202ENST00000407343 GSTT1P30711 240 aa10.55□□□□□ -0.72
PTPN12-202ENST00000407343 DGKGP49619 791 aa10.55□□□□□ -0.72
PTPN12-202ENST00000407343 ZNF417Q8TAU3 575 aa10.55□□□□□ -0.72
PTPN12-202ENST00000407343 ZNF587Q96SQ5 575 aaPredicted RBP10.55□□□□□ -0.72
PTPN12-202ENST00000407343 ZNF576Q9H609 170 aa10.55□□□□□ -0.72
PTPN12-202ENST00000407343 JPH1Q9HDC5 661 aaPredicted RBP10.55□□□□□ -0.72
PTPN12-202ENST00000407343 XRCC5P13010 732 aaKnown RBP10.53□□□□□ -0.72
PTPN12-202ENST00000407343 NID1P14543 1247 aa10.53□□□□□ -0.72
PTPN12-202ENST00000407343 FANCCQ00597 558 aa10.53□□□□□ -0.72
PTPN12-202ENST00000407343 FAAP100Q0VG06 881 aa10.53□□□□□ -0.72
PTPN12-202ENST00000407343 ASAP3Q8TDY4 903 aa10.53□□□□□ -0.72
PTPN12-202ENST00000407343 BSNDQ8WZ55 320 aa10.53□□□□□ -0.72
PTPN12-202ENST00000407343 LACRTQ9GZZ8 138 aa10.53□□□□□ -0.72
PTPN12-202ENST00000407343 TM4SF5O14894 197 aa10.52□□□□□ -0.73
PTPN12-202ENST00000407343 EPHA1P21709 976 aa10.52□□□□□ -0.73
PTPN12-202ENST00000407343 GDF6Q6KF10 455 aaPredicted RBP10.52□□□□□ -0.73
PTPN12-202ENST00000407343 METTL16Q86W50 562 aaKnown RBP10.52□□□□□ -0.73
PTPN12-202ENST00000407343 SH2B1Q9NRF2 756 aaPredicted RBP10.52□□□□□ -0.73
PTPN12-202ENST00000407343 PTPRAP18433 802 aa10.51□□□□□ -0.73
PTPN12-202ENST00000407343 ST13P50502 369 aaKnown RBP10.51□□□□□ -0.73
PTPN12-202ENST00000407343 DTHD1Q6ZMT9 781 aa10.51□□□□□ -0.73
PTPN12-202ENST00000407343 TMEM87AQ8NBN3 555 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms