RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 CDCA7LQ96GN5 454 aa7.37□□□□□ -1.23
HMGB1P20-201ENST00000402555 GPR101Q96P66 508 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P20-201ENST00000402555 TMX4Q9H1E5 349 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P20-201ENST00000402555 GJA3Q9Y6H8 435 aa7.37□□□□□ -1.23
HMGB1P20-201ENST00000402555 LRRC37AA6NMS7 1700 aa7.37□□□□□ -1.23
HMGB1P20-201ENST00000402555 CDHR2Q9BYE9 1310 aa7.36□□□□□ -1.23
HMGB1P20-201ENST00000402555 CCER2I3L3R5 266 aa7.36□□□□□ -1.23
HMGB1P20-201ENST00000402555 TBC1D12O60347 775 aa7.36□□□□□ -1.23
HMGB1P20-201ENST00000402555 PDE8AO60658 829 aa7.36□□□□□ -1.23
HMGB1P20-201ENST00000402555 EIF6P56537 245 aaKnown RBP7.36□□□□□ -1.23
HMGB1P20-201ENST00000402555 RPS8P62241 208 aaKnown RBP7.36□□□□□ -1.23
HMGB1P20-201ENST00000402555 GPSM2P81274 684 aa7.36□□□□□ -1.23
HMGB1P20-201ENST00000402555 NIM1KQ8IY84 436 aa7.36□□□□□ -1.23
HMGB1P20-201ENST00000402555 SMC1BQ8NDV3 1235 aa7.36□□□□□ -1.23
HMGB1P20-201ENST00000402555 OXER1Q8TDS5 423 aa7.36□□□□□ -1.23
HMGB1P20-201ENST00000402555 RTFDC1Q9BY42 306 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P20-201ENST00000402555 NSFL1CQ9UNZ2 370 aaKnown RBP7.36□□□□□ -1.23
HMGB1P20-201ENST00000402555 MYH3P11055 1940 aa7.35□□□□□ -1.23
HMGB1P20-201ENST00000402555 H7C1W4 665 aa7.35□□□□□ -1.23
HMGB1P20-201ENST00000402555 CTSWP56202 376 aa7.35□□□□□ -1.23
HMGB1P20-201ENST00000402555 SLFN5Q08AF3 891 aa7.35□□□□□ -1.23
HMGB1P20-201ENST00000402555 FSTL1Q12841 308 aa7.35□□□□□ -1.23
HMGB1P20-201ENST00000402555 GCKRQ14397 625 aa7.35□□□□□ -1.23
HMGB1P20-201ENST00000402555 CCDC152Q4G0S7 254 aa7.35□□□□□ -1.23
HMGB1P20-201ENST00000402555 GRIPAP1Q4V328 841 aa7.35□□□□□ -1.23
HMGB1P20-201ENST00000402555 EAPPQ56P03 285 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P20-201ENST00000402555 GPC2Q8N158 579 aa7.35□□□□□ -1.23
HMGB1P20-201ENST00000402555 SUPT20HQ8NEM7 779 aa7.35□□□□□ -1.23
HMGB1P20-201ENST00000402555 TTLL11Q8NHH1 800 aa7.35□□□□□ -1.23
HMGB1P20-201ENST00000402555 BCL2L13Q9BXK5 485 aa7.35□□□□□ -1.23
HMGB1P20-201ENST00000402555 TAF1DQ9H5J8 278 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P20-201ENST00000402555 GREM2Q9H772 168 aa7.35□□□□□ -1.23
HMGB1P20-201ENST00000402555 POLLQ9UGP5 575 aa7.35□□□□□ -1.23
HMGB1P20-201ENST00000402555 HACL1Q9UJ83 578 aa7.35□□□□□ -1.23
HMGB1P20-201ENST00000402555 SPEF2Q9C093 1822 aa7.35□□□□□ -1.23
HMGB1P20-201ENST00000402555 LTBP1Q14766 1721 aa7.35□□□□□ -1.23
HMGB1P20-201ENST00000402555 SCN4AP35499 1836 aa7.34□□□□□ -1.23
HMGB1P20-201ENST00000402555 IQCA1LA6NCM1 817 aa7.34□□□□□ -1.23
HMGB1P20-201ENST00000402555 E9PSI1 815 aa7.34□□□□□ -1.23
HMGB1P20-201ENST00000402555 C6orf229H3BNL8 230 aa7.34□□□□□ -1.23
HMGB1P20-201ENST00000402555 ARHGAP33O14559 1287 aa7.34□□□□□ -1.23
HMGB1P20-201ENST00000402555 RAD17O75943 681 aa7.34□□□□□ -1.23
HMGB1P20-201ENST00000402555 HSP90B1P14625 803 aaKnown RBP7.34□□□□□ -1.23
HMGB1P20-201ENST00000402555 EPHX2P34913 555 aa7.34□□□□□ -1.23
HMGB1P20-201ENST00000402555 APLP1P51693 650 aa7.34□□□□□ -1.23
HMGB1P20-201ENST00000402555 CASP7P55210 303 aa7.34□□□□□ -1.23
HMGB1P20-201ENST00000402555 CXCL9Q07325 125 aa7.34□□□□□ -1.23
HMGB1P20-201ENST00000402555 KIAA2012Q0VF49 1180 aa7.34□□□□□ -1.23
HMGB1P20-201ENST00000402555 PPP1R15BQ5SWA1 713 aa7.34□□□□□ -1.23
HMGB1P20-201ENST00000402555 BEND3Q5T5X7 828 aa7.34□□□□□ -1.23
HMGB1P20-201ENST00000402555 DIEXFQ68CQ4 756 aaKnown RBP7.34□□□□□ -1.23
HMGB1P20-201ENST00000402555 TMC4Q7Z404 712 aa7.34□□□□□ -1.23
HMGB1P20-201ENST00000402555 LINS1Q8NG48 757 aa7.34□□□□□ -1.23
HMGB1P20-201ENST00000402555 DBNDD1Q9H9R9 158 aa7.34□□□□□ -1.23
HMGB1P20-201ENST00000402555 ZNRF3Q9ULT6 936 aa7.34□□□□□ -1.23
HMGB1P20-201ENST00000402555 SHTN1A0MZ66 631 aa7.33□□□□□ -1.24
HMGB1P20-201ENST00000402555 WTIPA6NIX2 430 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P20-201ENST00000402555 YDJCA8MPS7 323 aa7.33□□□□□ -1.24
HMGB1P20-201ENST00000402555 UFL1O94874 794 aa7.33□□□□□ -1.24
HMGB1P20-201ENST00000402555 PDE4AP27815 886 aa7.33□□□□□ -1.24
HMGB1P20-201ENST00000402555 EPS15P42566 896 aa7.33□□□□□ -1.24
HMGB1P20-201ENST00000402555 SCNN1DP51172 638 aa7.33□□□□□ -1.24
HMGB1P20-201ENST00000402555 WASHC4Q2M389 1173 aa7.33□□□□□ -1.24
HMGB1P20-201ENST00000402555 FAM161AQ3B820 660 aa7.33□□□□□ -1.24
HMGB1P20-201ENST00000402555 SLC4A10Q6U841 1118 aa7.33□□□□□ -1.24
HMGB1P20-201ENST00000402555 ANKRD18AQ8IVF6 992 aa7.33□□□□□ -1.24
HMGB1P20-201ENST00000402555 MRPL50Q8N5N7 158 aaKnown RBP7.33□□□□□ -1.24
HMGB1P20-201ENST00000402555 TBC1D16Q8TBP0 767 aa7.33□□□□□ -1.24
HMGB1P20-201ENST00000402555 SSH1Q8WYL5 1049 aa7.33□□□□□ -1.24
HMGB1P20-201ENST00000402555 KCNQ5Q9NR82 932 aa7.33□□□□□ -1.24
HMGB1P20-201ENST00000402555 ANKIB1Q9P2G1 1089 aa7.33□□□□□ -1.24
HMGB1P20-201ENST00000402555 SCN9AQ15858 1988 aa7.32□□□□□ -1.24
HMGB1P20-201ENST00000402555 ECE2O60344 883 aa7.32□□□□□ -1.24
HMGB1P20-201ENST00000402555 LMOD1P29536 600 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P20-201ENST00000402555 GMPSP49915 693 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P20-201ENST00000402555 EPHA10Q5JZY3 1008 aa7.32□□□□□ -1.24
HMGB1P20-201ENST00000402555 CIAPIN1Q6FI81 312 aa7.32□□□□□ -1.24
HMGB1P20-201ENST00000402555 LDHDQ86WU2 507 aa7.32□□□□□ -1.24
HMGB1P20-201ENST00000402555 DNAJC5GQ8N7S2 189 aa7.32□□□□□ -1.24
HMGB1P20-201ENST00000402555 CDC5LQ99459 802 aaKnown RBP7.32□□□□□ -1.24
HMGB1P20-201ENST00000402555 PLA2G12BQ9BX93 195 aa7.32□□□□□ -1.24
HMGB1P20-201ENST00000402555 VPS33BQ9H267 617 aa7.32□□□□□ -1.24
HMGB1P20-201ENST00000402555 RTN4Q9NQC3 1192 aaKnown RBP7.32□□□□□ -1.24
HMGB1P20-201ENST00000402555 GGA1Q9UJY5 639 aa7.32□□□□□ -1.24
HMGB1P20-201ENST00000402555 CHMP3Q9Y3E7 222 aa7.32□□□□□ -1.24
HMGB1P20-201ENST00000402555 ADAMTSL1Q8N6G6 1762 aa7.32□□□□□ -1.24
HMGB1P20-201ENST00000402555 RTL9Q8NET4 1388 aa7.32□□□□□ -1.24
HMGB1P20-201ENST00000402555 XDHP47989 1333 aa7.31□□□□□ -1.24
HMGB1P20-201ENST00000402555 GRM8O00222 908 aa7.31□□□□□ -1.24
HMGB1P20-201ENST00000402555 PSMD14O00487 310 aa7.31□□□□□ -1.24
HMGB1P20-201ENST00000402555 CSF1RP07333 972 aa7.31□□□□□ -1.24
HMGB1P20-201ENST00000402555 ITGA6P23229 1130 aa7.31□□□□□ -1.24
HMGB1P20-201ENST00000402555 FOXO4P98177 505 aa7.31□□□□□ -1.24
HMGB1P20-201ENST00000402555 FMR1Q06787 632 aaKnown RBP eCLIP7.31□□□□□ -1.24
HMGB1P20-201ENST00000402555 PPP4R3BQ5MIZ7 849 aa7.31□□□□□ -1.24
HMGB1P20-201ENST00000402555 MAP1SQ66K74 1059 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P20-201ENST00000402555 TRMT2AQ8IZ69 625 aaKnown RBP7.31□□□□□ -1.24
HMGB1P20-201ENST00000402555 EYA3Q99504 573 aa7.31□□□□□ -1.24
HMGB1P20-201ENST00000402555 ZC3H12CQ9C0D7 883 aaKnown RBP7.31□□□□□ -1.24
HMGB1P20-201ENST00000402555 SRCIN1Q9C0H9 1055 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms