RNA–Protein interactions for RNA: ENST00000402468.3

C1GALT1-202, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene C1GALT1, Length 930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-202ENST00000402468 SF3A1Q15459 793 aaKnown RBP6.34□□□□□ -1.39
C1GALT1-202ENST00000402468 LDLRAD1Q5T700 205 aa6.34□□□□□ -1.39
C1GALT1-202ENST00000402468 PEAR1Q5VY43 1037 aaPredicted RBP6.34□□□□□ -1.39
C1GALT1-202ENST00000402468 C9orf131Q5VYM1 1079 aa6.34□□□□□ -1.39
C1GALT1-202ENST00000402468 ZKSCAN3Q9BRR0 538 aa6.34□□□□□ -1.39
C1GALT1-202ENST00000402468 OXCT2Q9BYC2 517 aaPredicted RBP6.34□□□□□ -1.39
C1GALT1-202ENST00000402468 LATS2Q9NRM7 1088 aa6.34□□□□□ -1.39
C1GALT1-202ENST00000402468 USP35Q9P2H5 1018 aa6.34□□□□□ -1.39
C1GALT1-202ENST00000402468 TMEM238LA0A1B0GVL6 79 aa6.33□□□□□ -1.4
C1GALT1-202ENST00000402468 SMNDC1O75940 238 aaKnown RBP eCLIP6.33□□□□□ -1.4
C1GALT1-202ENST00000402468 RLBP1P12271 317 aa6.33□□□□□ -1.4
C1GALT1-202ENST00000402468 ADH6P28332 368 aa6.33□□□□□ -1.4
C1GALT1-202ENST00000402468 PTPN12Q05209 780 aaKnown RBP6.33□□□□□ -1.4
C1GALT1-202ENST00000402468 ZNF385CQ66K41 422 aaPredicted RBP6.33□□□□□ -1.4
C1GALT1-202ENST00000402468 METTL16Q86W50 562 aaKnown RBP6.33□□□□□ -1.4
C1GALT1-202ENST00000402468 CEP120Q8N960 986 aa6.33□□□□□ -1.4
C1GALT1-202ENST00000402468 TMEM102Q8N9M5 508 aaPredicted RBP6.33□□□□□ -1.4
C1GALT1-202ENST00000402468 TNFRSF25Q93038 417 aa6.33□□□□□ -1.4
C1GALT1-202ENST00000402468 CEP44Q9C0F1 390 aa6.33□□□□□ -1.4
C1GALT1-202ENST00000402468 DZANK1Q9NVP4 752 aa6.33□□□□□ -1.4
C1GALT1-202ENST00000402468 DNAJB12Q9NXW2 375 aaKnown RBP6.33□□□□□ -1.4
C1GALT1-202ENST00000402468 GGT7Q9UJ14 662 aa6.33□□□□□ -1.4
C1GALT1-202ENST00000402468 AKAP2Q9Y2D5 859 aa6.33□□□□□ -1.4
C1GALT1-202ENST00000402468 ARAFP10398 606 aa6.32□□□□□ -1.4
C1GALT1-202ENST00000402468 NAALADL2Q58DX5 795 aa6.32□□□□□ -1.4
C1GALT1-202ENST00000402468 COL13A1Q5TAT6 717 aaPredicted RBP6.32□□□□□ -1.4
C1GALT1-202ENST00000402468 MEI1Q5TIA1 1274 aa6.32□□□□□ -1.4
C1GALT1-202ENST00000402468 USP48Q86UV5 1035 aa6.32□□□□□ -1.4
C1GALT1-202ENST00000402468 CCNJLQ8IV13 435 aa6.32□□□□□ -1.4
C1GALT1-202ENST00000402468 ZNF654Q8IZM8 581 aa6.32□□□□□ -1.4
C1GALT1-202ENST00000402468 GLIS3Q8NEA6 775 aa6.32□□□□□ -1.4
C1GALT1-202ENST00000402468 ASAP3Q8TDY4 903 aa6.32□□□□□ -1.4
C1GALT1-202ENST00000402468 ANKRD24Q8TF21 1146 aa6.32□□□□□ -1.4
C1GALT1-202ENST00000402468 NOC4LQ9BVI4 516 aaKnown RBP6.32□□□□□ -1.4
C1GALT1-202ENST00000402468 COL25A1Q9BXS0 654 aaPredicted RBP6.32□□□□□ -1.4
C1GALT1-202ENST00000402468 PBX4Q9BYU1 374 aa6.32□□□□□ -1.4
C1GALT1-202ENST00000402468 MBIPQ9NS73 344 aa6.32□□□□□ -1.4
C1GALT1-202ENST00000402468 PDE2AO00408 941 aaPredicted RBP6.31□□□□□ -1.4
C1GALT1-202ENST00000402468 ALAS2P22557 587 aa6.31□□□□□ -1.4
C1GALT1-202ENST00000402468 PCBP4P57723 403 aaKnown RBP6.31□□□□□ -1.4
C1GALT1-202ENST00000402468 MLLT1Q03111 559 aaPredicted RBP6.31□□□□□ -1.4
C1GALT1-202ENST00000402468 CCDC85BQ15834 202 aaPredicted RBP6.31□□□□□ -1.4
C1GALT1-202ENST00000402468 GPAT2Q6NUI2 795 aa6.31□□□□□ -1.4
C1GALT1-202ENST00000402468 ELMSAN1Q6PJG2 1045 aa6.31□□□□□ -1.4
C1GALT1-202ENST00000402468 HFE2Q6ZVN8 426 aa6.31□□□□□ -1.4
C1GALT1-202ENST00000402468 FAM35AQ86V20 835 aa6.31□□□□□ -1.4
C1GALT1-202ENST00000402468 SREK1Q8WXA9 508 aaKnown RBP6.31□□□□□ -1.4
C1GALT1-202ENST00000402468 TCF12Q99081 682 aa6.31□□□□□ -1.4
C1GALT1-202ENST00000402468 BHLHE41Q9C0J9 482 aaPredicted RBP6.31□□□□□ -1.4
C1GALT1-202ENST00000402468 ABCB6Q9NP58 842 aa6.31□□□□□ -1.4
C1GALT1-202ENST00000402468 HCN2Q9UL51 889 aa6.31□□□□□ -1.4
C1GALT1-202ENST00000402468 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.31□□□□□ -1.4
C1GALT1-202ENST00000402468 J3QW42 95 aa6.3□□□□□ -1.4
C1GALT1-202ENST00000402468 ADH7P40394 386 aa6.3□□□□□ -1.4
C1GALT1-202ENST00000402468 RPS26P11Q5JNZ5 115 aaPredicted RBP6.3□□□□□ -1.4
C1GALT1-202ENST00000402468 RNFT1Q5M7Z0 435 aa6.3□□□□□ -1.4
C1GALT1-202ENST00000402468 DIEXFQ68CQ4 756 aaKnown RBP6.3□□□□□ -1.4
C1GALT1-202ENST00000402468 SV2BQ7L1I2 683 aa6.3□□□□□ -1.4
C1GALT1-202ENST00000402468 RELL1Q8IUW5 271 aa6.3□□□□□ -1.4
C1GALT1-202ENST00000402468 SVOPQ8N4V2 548 aa6.3□□□□□ -1.4
C1GALT1-202ENST00000402468 C3orf58Q8NDZ4 430 aa6.3□□□□□ -1.4
C1GALT1-202ENST00000402468 DRC1Q96MC2 740 aa6.3□□□□□ -1.4
C1GALT1-202ENST00000402468 RASSF4Q9H2L5 321 aa6.3□□□□□ -1.4
C1GALT1-202ENST00000402468 SLC6A14Q9UN76 642 aa6.3□□□□□ -1.4
C1GALT1-202ENST00000402468 A0A096LPE4 126 aa6.29□□□□□ -1.4
C1GALT1-202ENST00000402468 A0A1W2PPZ6 126 aa6.29□□□□□ -1.4
C1GALT1-202ENST00000402468 ADARB2-AS1A8MUL3 147 aa6.29□□□□□ -1.4
C1GALT1-202ENST00000402468 C2CD2LO14523 706 aa6.29□□□□□ -1.4
C1GALT1-202ENST00000402468 CPB1P15086 417 aa6.29□□□□□ -1.4
C1GALT1-202ENST00000402468 ACPPP15309 386 aa6.29□□□□□ -1.4
C1GALT1-202ENST00000402468 PTPRAP18433 802 aa6.29□□□□□ -1.4
C1GALT1-202ENST00000402468 ITPKAP23677 461 aa6.29□□□□□ -1.4
C1GALT1-202ENST00000402468 RAD51AP2Q09MP3 1159 aa6.29□□□□□ -1.4
C1GALT1-202ENST00000402468 CEP135Q66GS9 1140 aa6.29□□□□□ -1.4
C1GALT1-202ENST00000402468 CACTIN-AS1Q8N1I8 211 aa6.29□□□□□ -1.4
C1GALT1-202ENST00000402468 GOLGA6L1Q8N7Z2 621 aa6.29□□□□□ -1.4
C1GALT1-202ENST00000402468 NXPE3Q969Y0 559 aa6.29□□□□□ -1.4
C1GALT1-202ENST00000402468 PLD4Q96BZ4 506 aa6.29□□□□□ -1.4
C1GALT1-202ENST00000402468 CAPN10Q9HC96 672 aa6.29□□□□□ -1.4
C1GALT1-202ENST00000402468 FRRS1LQ9P0K9 344 aa6.29□□□□□ -1.4
C1GALT1-202ENST00000402468 DDX41Q9UJV9 622 aaKnown RBP6.29□□□□□ -1.4
C1GALT1-202ENST00000402468 GDF2Q9UK05 429 aaPredicted RBP6.29□□□□□ -1.4
C1GALT1-202ENST00000402468 INPP5FQ9Y2H2 1132 aa6.29□□□□□ -1.4
C1GALT1-202ENST00000402468 SAMM50Q9Y512 469 aa6.29□□□□□ -1.4
C1GALT1-202ENST00000402468 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.29□□□□□ -1.4
C1GALT1-202ENST00000402468 ZBTB42B2RXF5 422 aa6.28□□□□□ -1.4
C1GALT1-202ENST00000402468 ARHGEF15O94989 841 aa6.28□□□□□ -1.4
C1GALT1-202ENST00000402468 IGHA1P01876 353 aa6.28□□□□□ -1.4
C1GALT1-202ENST00000402468 CABP4P57796 275 aa6.28□□□□□ -1.4
C1GALT1-202ENST00000402468 ATP11AP98196 1134 aa6.28□□□□□ -1.4
C1GALT1-202ENST00000402468 PPP2R3AQ06190 1150 aa6.28□□□□□ -1.4
C1GALT1-202ENST00000402468 TPTE2Q6XPS3 522 aa6.28□□□□□ -1.4
C1GALT1-202ENST00000402468 VPS37DQ86XT2 251 aa6.28□□□□□ -1.4
C1GALT1-202ENST00000402468 DDX54Q8TDD1 881 aaKnown RBP6.28□□□□□ -1.4
C1GALT1-202ENST00000402468 WHAMMQ8TF30 809 aa6.28□□□□□ -1.4
C1GALT1-202ENST00000402468 BSNDQ8WZ55 320 aa6.28□□□□□ -1.4
C1GALT1-202ENST00000402468 RSRP1Q9BUV0 290 aa6.28□□□□□ -1.4
C1GALT1-202ENST00000402468 GPN3Q9UHW5 284 aaPredicted RBP6.28□□□□□ -1.4
C1GALT1-202ENST00000402468 ELOA3CA0A087WX78 387 aaPredicted RBP6.27□□□□□ -1.41
C1GALT1-202ENST00000402468 ELOA3DA6NLF2 546 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms