RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 SKILP12757 684 aa12.39□□□□□ -0.43
PPP4R1-203ENST00000400556 TRHP20396 242 aaPredicted RBP12.39□□□□□ -0.43
PPP4R1-203ENST00000400556 ILDR1Q86SU0 546 aaPredicted RBP12.39□□□□□ -0.43
PPP4R1-203ENST00000400556 CCDC112Q8NEF3 446 aa12.39□□□□□ -0.43
PPP4R1-203ENST00000400556 IFIT1P09914 478 aaKnown RBP12.38□□□□□ -0.43
PPP4R1-203ENST00000400556 SF3A1Q15459 793 aaKnown RBP12.38□□□□□ -0.43
PPP4R1-203ENST00000400556 SMAP1Q8IYB5 467 aaPredicted RBP12.38□□□□□ -0.43
PPP4R1-203ENST00000400556 CCDC69A6NI79 296 aa12.38□□□□□ -0.43
PPP4R1-203ENST00000400556 M0R2C6 588 aa12.38□□□□□ -0.43
PPP4R1-203ENST00000400556 CABP4P57796 275 aa12.38□□□□□ -0.43
PPP4R1-203ENST00000400556 SNW1Q13573 536 aaKnown RBP12.38□□□□□ -0.43
PPP4R1-203ENST00000400556 RBM43Q6ZSC3 357 aaKnown RBP12.38□□□□□ -0.43
PPP4R1-203ENST00000400556 LRRC8AQ8IWT6 810 aa12.38□□□□□ -0.43
PPP4R1-203ENST00000400556 PFKFB2O60825 505 aa12.38□□□□□ -0.43
PPP4R1-203ENST00000400556 TSGA10IPQ3SY00 556 aa12.38□□□□□ -0.43
PPP4R1-203ENST00000400556 CLIC4Q9Y696 253 aa12.38□□□□□ -0.43
PPP4R1-203ENST00000400556 MAST3O60307 1309 aa12.38□□□□□ -0.43
PPP4R1-203ENST00000400556 PDIA3P30101 505 aaKnown RBP12.37□□□□□ -0.43
PPP4R1-203ENST00000400556 ADORA1P30542 326 aa12.37□□□□□ -0.43
PPP4R1-203ENST00000400556 HSP90AA4PQ58FG1 418 aa12.37□□□□□ -0.43
PPP4R1-203ENST00000400556 GORABQ5T7V8 394 aa12.37□□□□□ -0.43
PPP4R1-203ENST00000400556 LRP10Q7Z4F1 713 aa12.37□□□□□ -0.43
PPP4R1-203ENST00000400556 AIFM3Q96NN9 605 aa12.37□□□□□ -0.43
PPP4R1-203ENST00000400556 PCDHA7Q9UN72 937 aa12.37□□□□□ -0.43
PPP4R1-203ENST00000400556 NBPF26B4DH59 902 aa12.37□□□□□ -0.43
PPP4R1-203ENST00000400556 NDUFA8P51970 172 aa12.37□□□□□ -0.43
PPP4R1-203ENST00000400556 STX1AQ16623 288 aa12.37□□□□□ -0.43
PPP4R1-203ENST00000400556 DPCR1Q3MIW9 517 aa12.37□□□□□ -0.43
PPP4R1-203ENST00000400556 NBPF14Q5TI25 921 aa12.37□□□□□ -0.43
PPP4R1-203ENST00000400556 CEP135Q66GS9 1140 aa12.37□□□□□ -0.43
PPP4R1-203ENST00000400556 NBPF10Q6P3W6 841 aaKnown RBP12.37□□□□□ -0.43
PPP4R1-203ENST00000400556 ATG9AQ7Z3C6 839 aa12.37□□□□□ -0.43
PPP4R1-203ENST00000400556 PROSER2Q86WR7 435 aaPredicted RBP12.37□□□□□ -0.43
PPP4R1-203ENST00000400556 NBPF15Q8N660 670 aa12.37□□□□□ -0.43
PPP4R1-203ENST00000400556 OSBP2Q969R2 916 aa12.37□□□□□ -0.43
PPP4R1-203ENST00000400556 ZSCAN16Q9H4T2 348 aaPredicted RBP12.37□□□□□ -0.43
PPP4R1-203ENST00000400556 A0A1B0GUL7 405 aa12.37□□□□□ -0.43
PPP4R1-203ENST00000400556 SMC2O95347 1197 aa12.37□□□□□ -0.43
PPP4R1-203ENST00000400556 MARCKSP29966 332 aaPredicted RBP12.37□□□□□ -0.43
PPP4R1-203ENST00000400556 SMARCC2Q8TAQ2 1214 aa12.37□□□□□ -0.43
PPP4R1-203ENST00000400556 FDPSP14324 419 aaKnown RBP12.36□□□□□ -0.43
PPP4R1-203ENST00000400556 DHX40Q8IX18 779 aaKnown RBP12.36□□□□□ -0.43
PPP4R1-203ENST00000400556 IFNL2Q8IZJ0 200 aa12.36□□□□□ -0.43
PPP4R1-203ENST00000400556 ZNF215Q9UL58 517 aaPredicted RBP12.36□□□□□ -0.43
PPP4R1-203ENST00000400556 LMO7Q8WWI1 1683 aa12.36□□□□□ -0.43
PPP4R1-203ENST00000400556 FOXO4P98177 505 aa12.36□□□□□ -0.43
PPP4R1-203ENST00000400556 SCARF1Q14162 830 aa12.36□□□□□ -0.43
PPP4R1-203ENST00000400556 STK38Q15208 465 aa12.36□□□□□ -0.43
PPP4R1-203ENST00000400556 RCOR1Q9UKL0 485 aa12.36□□□□□ -0.43
PPP4R1-203ENST00000400556 SYNE4Q8N205 404 aa12.35□□□□□ -0.43
PPP4R1-203ENST00000400556 ANKRD7Q92527 254 aa12.35□□□□□ -0.43
PPP4R1-203ENST00000400556 RGPD5Q99666 1765 aa12.35□□□□□ -0.43
PPP4R1-203ENST00000400556 GOLGA8FQ08AF8 430 aa12.35□□□□□ -0.43
PPP4R1-203ENST00000400556 GOLGA8DPQ0D2H9 430 aa12.35□□□□□ -0.43
PPP4R1-203ENST00000400556 NKX2-3Q8TAU0 364 aa12.35□□□□□ -0.43
PPP4R1-203ENST00000400556 MEGF6O75095 1541 aa12.35□□□□□ -0.43
PPP4R1-203ENST00000400556 KLF18A0A0U1RQI7 1052 aa12.35□□□□□ -0.43
PPP4R1-203ENST00000400556 CTIFO43310 598 aaKnown RBP12.35□□□□□ -0.43
PPP4R1-203ENST00000400556 FAM160A1Q05DH4 1040 aa12.35□□□□□ -0.43
PPP4R1-203ENST00000400556 PTPN14Q15678 1187 aa12.35□□□□□ -0.43
PPP4R1-203ENST00000400556 ZRSR1Q15695 479 aaKnown RBP12.35□□□□□ -0.43
PPP4R1-203ENST00000400556 RABL6Q3YEC7 729 aaPredicted RBP12.35□□□□□ -0.43
PPP4R1-203ENST00000400556 ALDH8A1Q9H2A2 487 aaPredicted RBP12.35□□□□□ -0.43
PPP4R1-203ENST00000400556 GOLGA8BA8MQT2 603 aa12.34□□□□□ -0.43
PPP4R1-203ENST00000400556 SMTNL1A8MU46 457 aa12.34□□□□□ -0.43
PPP4R1-203ENST00000400556 CARMIL3Q8ND23 1372 aa12.34□□□□□ -0.43
PPP4R1-203ENST00000400556 JCADQ9P266 1359 aa12.34□□□□□ -0.43
PPP4R1-203ENST00000400556 LMOD1P29536 600 aaPredicted RBP12.34□□□□□ -0.43
PPP4R1-203ENST00000400556 EXOSC10Q01780 885 aaKnown RBP12.34□□□□□ -0.43
PPP4R1-203ENST00000400556 TMC6Q7Z403 805 aa12.34□□□□□ -0.43
PPP4R1-203ENST00000400556 IFNKQ9P0W0 207 aa12.34□□□□□ -0.43
PPP4R1-203ENST00000400556 C5P01031 1676 aa12.34□□□□□ -0.43
PPP4R1-203ENST00000400556 NCAPD2Q15021 1401 aa12.34□□□□□ -0.43
PPP4R1-203ENST00000400556 UBE2Q2LH0YL09 131 aa12.34□□□□□ -0.43
PPP4R1-203ENST00000400556 CASP7P55210 303 aa12.34□□□□□ -0.43
PPP4R1-203ENST00000400556 CEP57L1Q8IYX8 460 aa12.34□□□□□ -0.43
PPP4R1-203ENST00000400556 ENGASEQ8NFI3 743 aa12.34□□□□□ -0.43
PPP4R1-203ENST00000400556 ZBTB9Q96C00 473 aa12.34□□□□□ -0.43
PPP4R1-203ENST00000400556 ZMYM1Q5SVZ6 1142 aa12.33□□□□□ -0.43
PPP4R1-203ENST00000400556 C8orf76Q96K31 380 aa12.33□□□□□ -0.43
PPP4R1-203ENST00000400556 ORC3Q9UBD5 711 aaPredicted RBP12.33□□□□□ -0.43
PPP4R1-203ENST00000400556 KAT6BQ8WYB5 2073 aa12.33□□□□□ -0.44
PPP4R1-203ENST00000400556 KIF28PB7ZC32 967 aa12.33□□□□□ -0.44
PPP4R1-203ENST00000400556 DMTNQ08495 405 aa12.33□□□□□ -0.44
PPP4R1-203ENST00000400556 MRPS27Q92552 414 aaKnown RBP12.33□□□□□ -0.44
PPP4R1-203ENST00000400556 ZNF396Q96N95 335 aaPredicted RBP12.33□□□□□ -0.44
PPP4R1-203ENST00000400556 INCENPQ9NQS7 918 aa12.33□□□□□ -0.44
PPP4R1-203ENST00000400556 ANO10Q9NW15 660 aa12.33□□□□□ -0.44
PPP4R1-203ENST00000400556 CPLX1O14810 134 aa12.33□□□□□ -0.44
PPP4R1-203ENST00000400556 CCZ1BP86790 482 aa12.33□□□□□ -0.44
PPP4R1-203ENST00000400556 CCZ1P86791 482 aaPredicted RBP12.33□□□□□ -0.44
PPP4R1-203ENST00000400556 ELF2Q15723 593 aa12.33□□□□□ -0.44
PPP4R1-203ENST00000400556 NAA16Q6N069 864 aaPredicted RBP12.33□□□□□ -0.44
PPP4R1-203ENST00000400556 LRRN4CLQ8ND94 238 aa12.33□□□□□ -0.44
PPP4R1-203ENST00000400556 PLBD2Q8NHP8 589 aa12.33□□□□□ -0.44
PPP4R1-203ENST00000400556 FAM89AQ96GI7 184 aa12.33□□□□□ -0.44
PPP4R1-203ENST00000400556 XPO4Q9C0E2 1151 aaKnown RBP12.33□□□□□ -0.44
PPP4R1-203ENST00000400556 PUS7LQ9H0K6 701 aaKnown RBP12.33□□□□□ -0.44
PPP4R1-203ENST00000400556 ADGRL3Q9HAR2 1447 aa12.33□□□□□ -0.44
PPP4R1-203ENST00000400556 RNF113AO15541 343 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms