RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 NUDT16Q96DE0 195 aaKnown RBP13.14□□□□□ -0.31
HLCS-202ENST00000399120 SLC52A1Q9NWF4 448 aa13.14□□□□□ -0.31
HLCS-202ENST00000399120 PTPRCP08575 1304 aa13.14□□□□□ -0.31
HLCS-202ENST00000399120 NAPAP54920 295 aa13.14□□□□□ -0.31
HLCS-202ENST00000399120 SSH1Q8WYL5 1049 aa13.14□□□□□ -0.31
HLCS-202ENST00000399120 ZNF830Q96NB3 372 aaPredicted RBP13.14□□□□□ -0.31
HLCS-202ENST00000399120 NUF2Q9BZD4 464 aa13.14□□□□□ -0.31
HLCS-202ENST00000399120 IFT74Q96LB3 600 aa13.13□□□□□ -0.31
HLCS-202ENST00000399120 HS2ST1Q7LGA3 356 aa13.13□□□□□ -0.31
HLCS-202ENST00000399120 CCDC65Q8IXS2 484 aa13.13□□□□□ -0.31
HLCS-202ENST00000399120 CNNM2Q9H8M5 875 aa13.13□□□□□ -0.31
HLCS-202ENST00000399120 MAP3K2Q9Y2U5 619 aa13.13□□□□□ -0.31
HLCS-202ENST00000399120 ABCC11Q96J66 1382 aa13.13□□□□□ -0.31
HLCS-202ENST00000399120 ST5P78524 1137 aa13.13□□□□□ -0.31
HLCS-202ENST00000399120 CCDC186Q7Z3E2 898 aa13.13□□□□□ -0.31
HLCS-202ENST00000399120 USHBP1Q8N6Y0 703 aa13.13□□□□□ -0.31
HLCS-202ENST00000399120 ESR2Q92731 530 aa13.13□□□□□ -0.31
HLCS-202ENST00000399120 FAM76AQ8TAV0 307 aa13.13□□□□□ -0.31
HLCS-202ENST00000399120 HDAC9Q9UKV0 1011 aa13.13□□□□□ -0.31
HLCS-202ENST00000399120 FYB2Q5VWT5 728 aa13.13□□□□□ -0.31
HLCS-202ENST00000399120 GPR161Q8N6U8 529 aaKnown RBP13.13□□□□□ -0.31
HLCS-202ENST00000399120 GUCA1BQ9UMX6 200 aa13.13□□□□□ -0.31
HLCS-202ENST00000399120 TOP2AP11388 1531 aaKnown RBP13.12□□□□□ -0.31
HLCS-202ENST00000399120 UBXN1Q04323 297 aa13.12□□□□□ -0.31
HLCS-202ENST00000399120 KLHL40Q2TBA0 621 aa13.12□□□□□ -0.31
HLCS-202ENST00000399120 PPP1R21Q6ZMI0 780 aa13.12□□□□□ -0.31
HLCS-202ENST00000399120 DHX58Q96C10 678 aa13.12□□□□□ -0.31
HLCS-202ENST00000399120 TSGA10Q9BZW7 698 aa13.12□□□□□ -0.31
HLCS-202ENST00000399120 E7EVH7 732 aa13.12□□□□□ -0.31
HLCS-202ENST00000399120 VIMP08670 466 aaKnown RBP13.12□□□□□ -0.31
HLCS-202ENST00000399120 RARSP54136 660 aaKnown RBP13.12□□□□□ -0.31
HLCS-202ENST00000399120 AKNAD1Q5T1N1 836 aa13.12□□□□□ -0.31
HLCS-202ENST00000399120 TBC1D9Q6ZT07 1266 aa13.12□□□□□ -0.31
HLCS-202ENST00000399120 CEP128Q6ZU80 1094 aa13.12□□□□□ -0.31
HLCS-202ENST00000399120 LMNTD2Q8IXW0 634 aa13.12□□□□□ -0.31
HLCS-202ENST00000399120 ZGPATQ8N5A5 531 aaKnown RBP13.12□□□□□ -0.31
HLCS-202ENST00000399120 TEX13AQ9BXU3 409 aaPredicted RBP13.12□□□□□ -0.31
HLCS-202ENST00000399120 CSRNP2Q9H175 543 aa13.12□□□□□ -0.31
HLCS-202ENST00000399120 FAM204AQ9H8W3 233 aa13.12□□□□□ -0.31
HLCS-202ENST00000399120 AGTPBP1Q9UPW5 1226 aa13.12□□□□□ -0.31
HLCS-202ENST00000399120 ERCC3P19447 782 aa13.11□□□□□ -0.31
HLCS-202ENST00000399120 KRT79Q5XKE5 535 aa13.11□□□□□ -0.31
HLCS-202ENST00000399120 ZNF569Q5MCW4 686 aa13.11□□□□□ -0.31
HLCS-202ENST00000399120 AFAP1L2Q8N4X5 818 aa13.11□□□□□ -0.31
HLCS-202ENST00000399120 KIFC2Q96AC6 838 aa13.11□□□□□ -0.31
HLCS-202ENST00000399120 PLS1Q14651 629 aa13.11□□□□□ -0.31
HLCS-202ENST00000399120 GKAP1Q5VSY0 366 aaPredicted RBP13.11□□□□□ -0.31
HLCS-202ENST00000399120 BRF1Q92994 677 aa13.11□□□□□ -0.31
HLCS-202ENST00000399120 SLC4A4Q9Y6R1 1079 aa13.11□□□□□ -0.31
HLCS-202ENST00000399120 SPDYE3A6NKU9 549 aa13.11□□□□□ -0.31
HLCS-202ENST00000399120 RHOXF2BP0C7M4 288 aa13.11□□□□□ -0.31
HLCS-202ENST00000399120 CYP7A1P22680 504 aa13.11□□□□□ -0.31
HLCS-202ENST00000399120 PCK1P35558 622 aa13.11□□□□□ -0.31
HLCS-202ENST00000399120 KARSQ15046 597 aaKnown RBP13.11□□□□□ -0.31
HLCS-202ENST00000399120 SDCCAG8Q86SQ7 713 aaPredicted RBP13.11□□□□□ -0.31
HLCS-202ENST00000399120 RAB3IPQ96QF0 476 aaPredicted RBP13.11□□□□□ -0.31
HLCS-202ENST00000399120 RHOXF2Q9BQY4 288 aa13.11□□□□□ -0.31
HLCS-202ENST00000399120 GIPC1O14908 333 aa13.11□□□□□ -0.31
HLCS-202ENST00000399120 CUL4BQ13620 913 aa13.11□□□□□ -0.31
HLCS-202ENST00000399120 CCDC26Q8TAB7 109 aa13.11□□□□□ -0.31
HLCS-202ENST00000399120 FAM200AQ8TCP9 573 aa13.11□□□□□ -0.31
HLCS-202ENST00000399120 TBC1D31Q96DN5 1066 aa13.11□□□□□ -0.31
HLCS-202ENST00000399120 CCDC61Q9Y6R9 512 aa13.11□□□□□ -0.31
HLCS-202ENST00000399120 ERCC5P28715 1186 aaPredicted RBP13.1□□□□□ -0.31
HLCS-202ENST00000399120 GBP1P32455 592 aa13.1□□□□□ -0.31
HLCS-202ENST00000399120 IRX3P78415 501 aaPredicted RBP13.1□□□□□ -0.31
HLCS-202ENST00000399120 FMNL3Q8IVF7 1028 aa13.1□□□□□ -0.31
HLCS-202ENST00000399120 ARID4AP29374 1257 aaPredicted RBP13.1□□□□□ -0.31
HLCS-202ENST00000399120 MARCKSP29966 332 aaPredicted RBP13.1□□□□□ -0.31
HLCS-202ENST00000399120 NECAB1Q8N987 351 aa13.1□□□□□ -0.31
HLCS-202ENST00000399120 SIRT1Q96EB6 747 aa13.1□□□□□ -0.31
HLCS-202ENST00000399120 PSMD6Q15008 389 aa13.1□□□□□ -0.31
HLCS-202ENST00000399120 CCDC152Q4G0S7 254 aa13.1□□□□□ -0.31
HLCS-202ENST00000399120 CACYBPQ9HB71 228 aaKnown RBP13.1□□□□□ -0.31
HLCS-202ENST00000399120 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.1□□□□□ -0.31
HLCS-202ENST00000399120 RFC4P35249 363 aa13.1□□□□□ -0.31
HLCS-202ENST00000399120 MCM7P33993 719 aa13.1□□□□□ -0.31
HLCS-202ENST00000399120 GRM1Q13255 1194 aa13.1□□□□□ -0.31
HLCS-202ENST00000399120 GABPB2Q8TAK5 448 aaPredicted RBP13.1□□□□□ -0.31
HLCS-202ENST00000399120 CNPY2Q9Y2B0 182 aa13.1□□□□□ -0.31
HLCS-202ENST00000399120 RTL1A6NKG5 1358 aa13.1□□□□□ -0.31
HLCS-202ENST00000399120 EXOC5O00471 708 aa13.09□□□□□ -0.31
HLCS-202ENST00000399120 ADAMTS2O95450 1211 aa13.09□□□□□ -0.31
HLCS-202ENST00000399120 FLIIQ13045 1269 aa13.09□□□□□ -0.31
HLCS-202ENST00000399120 DNAJC25Q9H1X3 360 aa13.09□□□□□ -0.31
HLCS-202ENST00000399120 FAM114A2Q9NRY5 505 aa13.09□□□□□ -0.31
HLCS-202ENST00000399120 NKTRP30414 1462 aaKnown RBP13.09□□□□□ -0.31
HLCS-202ENST00000399120 RSPH3Q86UC2 560 aa13.09□□□□□ -0.31
HLCS-202ENST00000399120 LEO1Q8WVC0 666 aaPredicted RBP13.09□□□□□ -0.31
HLCS-202ENST00000399120 LZTFL1Q9NQ48 299 aa13.09□□□□□ -0.31
HLCS-202ENST00000399120 A0A1B0GUA9 196 aa13.09□□□□□ -0.31
HLCS-202ENST00000399120 TUBBP07437 444 aa13.09□□□□□ -0.31
HLCS-202ENST00000399120 ATP2B3Q16720 1220 aa13.09□□□□□ -0.31
HLCS-202ENST00000399120 TRIM75PA6NK02 468 aa13.09□□□□□ -0.31
HLCS-202ENST00000399120 ATP5J2-PTCD1G3V325 749 aa13.09□□□□□ -0.31
HLCS-202ENST00000399120 FAM160A1Q05DH4 1040 aa13.08□□□□□ -0.31
HLCS-202ENST00000399120 ITIH3Q06033 890 aa13.08□□□□□ -0.31
HLCS-202ENST00000399120 HDXQ7Z353 690 aa13.08□□□□□ -0.31
HLCS-202ENST00000399120 RRP36Q96EU6 259 aaKnown RBP13.08□□□□□ -0.31
HLCS-202ENST00000399120 KRT5P13647 590 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms