RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 CCDC158Q5M9N0 1113 aa12.08□□□□□ -0.47
DDX39B-202ENST00000396172 RTKN2Q8IZC4 609 aa12.08□□□□□ -0.47
DDX39B-202ENST00000396172 HELBQ8NG08 1087 aaPredicted RBP12.08□□□□□ -0.47
DDX39B-202ENST00000396172 NSFL1CQ9UNZ2 370 aaKnown RBP12.08□□□□□ -0.47
DDX39B-202ENST00000396172 SNED1Q8TER0 1413 aa12.08□□□□□ -0.48
DDX39B-202ENST00000396172 SALL3Q9BXA9 1300 aa12.08□□□□□ -0.48
DDX39B-202ENST00000396172 UFL1O94874 794 aa12.08□□□□□ -0.48
DDX39B-202ENST00000396172 GPSM2P81274 684 aa12.08□□□□□ -0.48
DDX39B-202ENST00000396172 CAVIN4Q5BKX8 364 aa12.08□□□□□ -0.48
DDX39B-202ENST00000396172 C15orf52Q6ZUT6 534 aaKnown RBP12.08□□□□□ -0.48
DDX39B-202ENST00000396172 ERICH6Q7L0X2 663 aa12.08□□□□□ -0.48
DDX39B-202ENST00000396172 OSBPL3Q9H4L5 887 aa12.08□□□□□ -0.48
DDX39B-202ENST00000396172 ECHDC1Q9NTX5 307 aa12.08□□□□□ -0.48
DDX39B-202ENST00000396172 C7orf43Q8WVR3 580 aa12.07□□□□□ -0.48
DDX39B-202ENST00000396172 XAGE2Q96GT9 111 aa12.07□□□□□ -0.48
DDX39B-202ENST00000396172 CCDC8Q9H0W5 538 aaPredicted RBP12.07□□□□□ -0.48
DDX39B-202ENST00000396172 GNL3LQ9NVN8 582 aaKnown RBP12.07□□□□□ -0.48
DDX39B-202ENST00000396172 STAP2Q9UGK3 403 aa12.07□□□□□ -0.48
DDX39B-202ENST00000396172 DBNLQ9UJU6 430 aaKnown RBP12.07□□□□□ -0.48
DDX39B-202ENST00000396172 GLRX3O76003 335 aaKnown RBP12.07□□□□□ -0.48
DDX39B-202ENST00000396172 PDE4AP27815 886 aa12.07□□□□□ -0.48
DDX39B-202ENST00000396172 RGS3P49796 1198 aa12.07□□□□□ -0.48
DDX39B-202ENST00000396172 PDE1AP54750 535 aa12.07□□□□□ -0.48
DDX39B-202ENST00000396172 ZNF804AQ7Z570 1209 aa12.07□□□□□ -0.48
DDX39B-202ENST00000396172 VPS37DQ86XT2 251 aa12.07□□□□□ -0.48
DDX39B-202ENST00000396172 PLEKHM2Q8IWE5 1019 aa12.07□□□□□ -0.48
DDX39B-202ENST00000396172 C6orf229H3BNL8 230 aa12.06□□□□□ -0.48
DDX39B-202ENST00000396172 UQCRFS1P1P0C7P4 283 aa12.06□□□□□ -0.48
DDX39B-202ENST00000396172 TIMM10P62072 90 aa12.06□□□□□ -0.48
DDX39B-202ENST00000396172 TTC39AQ5SRH9 613 aa12.06□□□□□ -0.48
DDX39B-202ENST00000396172 NLGN2Q8NFZ4 835 aa12.06□□□□□ -0.48
DDX39B-202ENST00000396172 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.06□□□□□ -0.48
DDX39B-202ENST00000396172 PSMD1Q99460 953 aa12.06□□□□□ -0.48
DDX39B-202ENST00000396172 DBNDD2Q9BQY9 259 aa12.06□□□□□ -0.48
DDX39B-202ENST00000396172 SYT17Q9BSW7 474 aa12.06□□□□□ -0.48
DDX39B-202ENST00000396172 ZNF646O15015 1829 aaPredicted RBP12.06□□□□□ -0.48
DDX39B-202ENST00000396172 TIAM2Q8IVF5 1701 aa12.06□□□□□ -0.48
DDX39B-202ENST00000396172 ZBTB22O15209 634 aa12.05□□□□□ -0.48
DDX39B-202ENST00000396172 C21orf2O43822 256 aa12.05□□□□□ -0.48
DDX39B-202ENST00000396172 TBC1D16Q8TBP0 767 aa12.05□□□□□ -0.48
DDX39B-202ENST00000396172 ZNF512BQ96KM6 892 aaPredicted RBP12.05□□□□□ -0.48
DDX39B-202ENST00000396172 RTFDC1Q9BY42 306 aaPredicted RBP12.05□□□□□ -0.48
DDX39B-202ENST00000396172 VPS33BQ9H267 617 aa12.05□□□□□ -0.48
DDX39B-202ENST00000396172 BCS1LQ9Y276 419 aa12.05□□□□□ -0.48
DDX39B-202ENST00000396172 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.05□□□□□ -0.48
DDX39B-202ENST00000396172 SEMA3EO15041 775 aa12.05□□□□□ -0.48
DDX39B-202ENST00000396172 TLR7Q9NYK1 1049 aaKnown RBP12.05□□□□□ -0.48
DDX39B-202ENST00000396172 LTBP3Q9NS15 1303 aa12.04□□□□□ -0.48
DDX39B-202ENST00000396172 ATP5JP18859 108 aa12.04□□□□□ -0.48
DDX39B-202ENST00000396172 ARID4AP29374 1257 aaPredicted RBP12.04□□□□□ -0.48
DDX39B-202ENST00000396172 C16orf71Q8IYS4 520 aaPredicted RBP12.04□□□□□ -0.48
DDX39B-202ENST00000396172 ZC3H12CQ9C0D7 883 aaKnown RBP12.04□□□□□ -0.48
DDX39B-202ENST00000396172 ZNF219Q9P2Y4 722 aaPredicted RBP12.04□□□□□ -0.48
DDX39B-202ENST00000396172 PDS5AQ29RF7 1337 aaKnown RBP12.04□□□□□ -0.48
DDX39B-202ENST00000396172 ADORA1P30542 326 aa12.04□□□□□ -0.48
DDX39B-202ENST00000396172 FKBP4Q02790 459 aaKnown RBP eCLIP12.04□□□□□ -0.48
DDX39B-202ENST00000396172 TTC22Q5TAA0 569 aa12.04□□□□□ -0.48
DDX39B-202ENST00000396172 CCDC102BQ68D86 513 aa12.04□□□□□ -0.48
DDX39B-202ENST00000396172 OTUD7AQ8TE49 926 aaPredicted RBP12.04□□□□□ -0.48
DDX39B-202ENST00000396172 SCN9AQ15858 1988 aa12.03□□□□□ -0.48
DDX39B-202ENST00000396172 IRS2Q9Y4H2 1338 aa12.03□□□□□ -0.48
DDX39B-202ENST00000396172 HIBADHP31937 336 aaKnown RBP12.03□□□□□ -0.48
DDX39B-202ENST00000396172 WASHC4Q2M389 1173 aa12.03□□□□□ -0.48
DDX39B-202ENST00000396172 TAOK3Q9H2K8 898 aa12.03□□□□□ -0.48
DDX39B-202ENST00000396172 POLLQ9UGP5 575 aa12.03□□□□□ -0.48
DDX39B-202ENST00000396172 MYH2Q9UKX2 1941 aa12.03□□□□□ -0.48
DDX39B-202ENST00000396172 G3V3G9 751 aa12.02□□□□□ -0.48
DDX39B-202ENST00000396172 BMP2KLQ5H9B9 411 aa12.02□□□□□ -0.48
DDX39B-202ENST00000396172 DCAF8Q5TAQ9 597 aa12.02□□□□□ -0.48
DDX39B-202ENST00000396172 PI4K2BQ8TCG2 481 aa12.02□□□□□ -0.48
DDX39B-202ENST00000396172 COA1Q9GZY4 146 aa12.02□□□□□ -0.48
DDX39B-202ENST00000396172 FRAT2O75474 233 aaPredicted RBP12.02□□□□□ -0.49
DDX39B-202ENST00000396172 OLFM4Q6UX06 510 aa12.02□□□□□ -0.49
DDX39B-202ENST00000396172 FBXO33Q7Z6M2 555 aa12.02□□□□□ -0.49
DDX39B-202ENST00000396172 CNTROBQ8N137 903 aa12.02□□□□□ -0.49
DDX39B-202ENST00000396172 FAM84BQ96KN1 310 aaPredicted RBP12.02□□□□□ -0.49
DDX39B-202ENST00000396172 DENND2AQ9ULE3 1009 aa12.02□□□□□ -0.49
DDX39B-202ENST00000396172 RFX7Q2KHR2 1363 aa12.02□□□□□ -0.49
DDX39B-202ENST00000396172 SNAP23O00161 211 aa12.01□□□□□ -0.49
DDX39B-202ENST00000396172 PHKA1P46020 1223 aa12.01□□□□□ -0.49
DDX39B-202ENST00000396172 GYG1P46976 350 aa12.01□□□□□ -0.49
DDX39B-202ENST00000396172 KIAA2012Q0VF49 1180 aa12.01□□□□□ -0.49
DDX39B-202ENST00000396172 TTF1Q15361 905 aaPredicted RBP12.01□□□□□ -0.49
DDX39B-202ENST00000396172 TICAM2Q86XR7 235 aa12.01□□□□□ -0.49
DDX39B-202ENST00000396172 HAUS7Q99871 368 aa12.01□□□□□ -0.49
DDX39B-202ENST00000396172 IGSF3O75054 1194 aa12.01□□□□□ -0.49
DDX39B-202ENST00000396172 BCAMP50895 628 aa12.01□□□□□ -0.49
DDX39B-202ENST00000396172 LRRFIP1Q32MZ4 808 aaKnown RBP12.01□□□□□ -0.49
DDX39B-202ENST00000396172 PPIP5K2O43314 1243 aa12□□□□□ -0.49
DDX39B-202ENST00000396172 IL1R1P14778 569 aa12□□□□□ -0.49
DDX39B-202ENST00000396172 ZGPATQ8N5A5 531 aaKnown RBP12□□□□□ -0.49
DDX39B-202ENST00000396172 BOLA2Q9H3K6 86 aa12□□□□□ -0.49
DDX39B-202ENST00000396172 ECM29Q5VYK3 1845 aa12□□□□□ -0.49
DDX39B-202ENST00000396172 TRIM6-TRIM34B2RNG4 842 aa11.99□□□□□ -0.49
DDX39B-202ENST00000396172 KLRK1P26718 216 aa11.99□□□□□ -0.49
DDX39B-202ENST00000396172 IARSP41252 1262 aaKnown RBP11.99□□□□□ -0.49
DDX39B-202ENST00000396172 TSHZ3Q63HK5 1081 aa11.99□□□□□ -0.49
DDX39B-202ENST00000396172 PODNQ7Z5L7 613 aa11.99□□□□□ -0.49
DDX39B-202ENST00000396172 SLC51AQ86UW1 340 aa11.99□□□□□ -0.49
DDX39B-202ENST00000396172 SPATA5Q8NB90 893 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms