RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 UTP11Q9Y3A2 253 aaKnown RBP9.01□□□□□ -0.97
TRPS1-203ENST00000395715 SESN3P58005 492 aa9.01□□□□□ -0.97
TRPS1-203ENST00000395715 ABTB2Q8N961 1025 aa9.01□□□□□ -0.97
TRPS1-203ENST00000395715 DDX54Q8TDD1 881 aaKnown RBP9.01□□□□□ -0.97
TRPS1-203ENST00000395715 RPGRIP1Q96KN7 1286 aa9.01□□□□□ -0.97
TRPS1-203ENST00000395715 CCDC144AA2RUR9 1427 aa9.01□□□□□ -0.97
TRPS1-203ENST00000395715 KRT3P12035 628 aa9□□□□□ -0.97
TRPS1-203ENST00000395715 FNBP4Q8N3X1 1017 aaPredicted RBP9□□□□□ -0.97
TRPS1-203ENST00000395715 TMEM57Q8N5G2 664 aa9□□□□□ -0.97
TRPS1-203ENST00000395715 E7EVH7 732 aa9□□□□□ -0.97
TRPS1-203ENST00000395715 SYT1P21579 422 aa9□□□□□ -0.97
TRPS1-203ENST00000395715 RASA3Q14644 834 aa9□□□□□ -0.97
TRPS1-203ENST00000395715 RMND1Q9NWS8 449 aa9□□□□□ -0.97
TRPS1-203ENST00000395715 BAG2O95816 211 aa9□□□□□ -0.97
TRPS1-203ENST00000395715 GUCY1B3Q02153 619 aa9□□□□□ -0.97
TRPS1-203ENST00000395715 TRAF3IP1Q8TDR0 691 aaPredicted RBP9□□□□□ -0.97
TRPS1-203ENST00000395715 PDS5BQ9NTI5 1447 aa9□□□□□ -0.97
TRPS1-203ENST00000395715 ST20-MTHFSA0A0A6YYL1 179 aa9□□□□□ -0.97
TRPS1-203ENST00000395715 UBE2HP62256 183 aa9□□□□□ -0.97
TRPS1-203ENST00000395715 ZSCAN23Q3MJ62 389 aa9□□□□□ -0.97
TRPS1-203ENST00000395715 EHMT1Q9H9B1 1298 aa9□□□□□ -0.97
TRPS1-203ENST00000395715 DDX41Q9UJV9 622 aaKnown RBP9□□□□□ -0.97
TRPS1-203ENST00000395715 AFG3L2Q9Y4W6 797 aa9□□□□□ -0.97
TRPS1-203ENST00000395715 CAPN7Q9Y6W3 813 aa9□□□□□ -0.97
TRPS1-203ENST00000395715 CCDC18Q5T9S5 1454 aa9□□□□□ -0.97
TRPS1-203ENST00000395715 RAB11FIP3O75154 756 aa9□□□□□ -0.97
TRPS1-203ENST00000395715 GABPB1Q06547 395 aaPredicted RBP9□□□□□ -0.97
TRPS1-203ENST00000395715 ARMC9Q7Z3E5 817 aa9□□□□□ -0.97
TRPS1-203ENST00000395715 NACADO15069 1562 aa9□□□□□ -0.97
TRPS1-203ENST00000395715 ANKRD20A3Q5VUR7 823 aa9□□□□□ -0.97
TRPS1-203ENST00000395715 ESRRGP62508 458 aa8.99□□□□□ -0.97
TRPS1-203ENST00000395715 SH2B1Q9NRF2 756 aaPredicted RBP8.99□□□□□ -0.97
TRPS1-203ENST00000395715 POLE3Q9NRF9 147 aa8.99□□□□□ -0.97
TRPS1-203ENST00000395715 E9PMD0 336 aa8.99□□□□□ -0.97
TRPS1-203ENST00000395715 SSRP1Q08945 709 aaKnown RBP8.99□□□□□ -0.97
TRPS1-203ENST00000395715 AACSQ86V21 672 aa8.99□□□□□ -0.97
TRPS1-203ENST00000395715 ZCRB1Q8TBF4 217 aaKnown RBP8.99□□□□□ -0.97
TRPS1-203ENST00000395715 HAUS1Q96CS2 278 aa8.99□□□□□ -0.97
TRPS1-203ENST00000395715 RMDN2Q96LZ7 410 aa8.99□□□□□ -0.97
TRPS1-203ENST00000395715 RPGRIP1LQ68CZ1 1315 aa8.99□□□□□ -0.97
TRPS1-203ENST00000395715 LMNB2Q03252 620 aa8.99□□□□□ -0.97
TRPS1-203ENST00000395715 TTF1Q15361 905 aaPredicted RBP8.99□□□□□ -0.97
TRPS1-203ENST00000395715 VEZTQ9HBM0 779 aa8.99□□□□□ -0.97
TRPS1-203ENST00000395715 SMG6Q86US8 1419 aaKnown RBP8.99□□□□□ -0.97
TRPS1-203ENST00000395715 DRC3Q9H069 523 aa8.99□□□□□ -0.97
TRPS1-203ENST00000395715 GUCA1BQ9UMX6 200 aa8.99□□□□□ -0.97
TRPS1-203ENST00000395715 RPSAP08865 295 aaKnown RBP8.99□□□□□ -0.97
TRPS1-203ENST00000395715 PPP2R5AQ15172 486 aa8.99□□□□□ -0.97
TRPS1-203ENST00000395715 CEP19Q96LK0 163 aa8.99□□□□□ -0.97
TRPS1-203ENST00000395715 LRRC27Q9C0I9 530 aa8.99□□□□□ -0.97
TRPS1-203ENST00000395715 IDEP14735 1019 aa8.99□□□□□ -0.97
TRPS1-203ENST00000395715 GRAMD4Q6IC98 578 aa8.99□□□□□ -0.97
TRPS1-203ENST00000395715 TNPO1Q92973 898 aaKnown RBP8.99□□□□□ -0.97
TRPS1-203ENST00000395715 L3MBTL2Q969R5 705 aa8.99□□□□□ -0.97
TRPS1-203ENST00000395715 ARHGAP42A6NI28 874 aa8.99□□□□□ -0.97
TRPS1-203ENST00000395715 ZNF569Q5MCW4 686 aa8.99□□□□□ -0.97
TRPS1-203ENST00000395715 SRGAP1Q7Z6B7 1085 aa8.99□□□□□ -0.97
TRPS1-203ENST00000395715 CCDC194A0A1B0GVG4 234 aa8.99□□□□□ -0.97
TRPS1-203ENST00000395715 SNCBQ16143 134 aa8.99□□□□□ -0.97
TRPS1-203ENST00000395715 GABPB2Q8TAK5 448 aaPredicted RBP8.99□□□□□ -0.97
TRPS1-203ENST00000395715 UIMC1Q96RL1 719 aa8.99□□□□□ -0.97
TRPS1-203ENST00000395715 YY1AP1Q9H869 796 aa8.99□□□□□ -0.97
TRPS1-203ENST00000395715 EEF1DP29692 281 aaKnown RBP8.98□□□□□ -0.97
TRPS1-203ENST00000395715 PPP2R3AQ06190 1150 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 AIDAQ96BJ3 306 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 RABEP2Q9H5N1 569 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 ZFYVE1Q9HBF4 777 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 CCDC93Q567U6 631 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 NOB1Q9ULX3 412 aaKnown RBP8.98□□□□□ -0.97
TRPS1-203ENST00000395715 GPRASP1Q5JY77 1395 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 CSRNP2Q9H175 543 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 FMN1Q68DA7 1419 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 ARID5AQ03989 594 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 ANO6Q4KMQ2 910 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 SEL1L2Q5TEA6 688 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 PLCB1Q9NQ66 1216 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 LRP2BPQ9P2M1 347 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 ACTN4O43707 911 aaKnown RBP8.98□□□□□ -0.97
TRPS1-203ENST00000395715 HCLS1P14317 486 aaPredicted RBP8.98□□□□□ -0.97
TRPS1-203ENST00000395715 BICDL1Q6ZP65 573 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 TOM1L2Q6ZVM7 507 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 MPHOSPH8Q99549 860 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 POTEB3A0JP26 581 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 SERPINB6P35237 376 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 CABP4P57796 275 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 POTEBQ6S5H4 581 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 CCDC68Q9H2F9 335 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 LZTFL1Q9NQ48 299 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 RUFY4Q6ZNE9 571 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 CCT4P50991 539 aaKnown RBP8.98□□□□□ -0.97
TRPS1-203ENST00000395715 CCDC102BQ68D86 513 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 NUTM1Q86Y26 1132 aa8.98□□□□□ -0.97
TRPS1-203ENST00000395715 PPP1R12AO14974 1030 aaPredicted RBP8.97□□□□□ -0.97
TRPS1-203ENST00000395715 RILPL1Q5EBL4 403 aa8.97□□□□□ -0.97
TRPS1-203ENST00000395715 CERS3Q8IU89 383 aa8.97□□□□□ -0.97
TRPS1-203ENST00000395715 MRRFQ96E11 262 aaKnown RBP8.97□□□□□ -0.97
TRPS1-203ENST00000395715 AGTPBP1Q9UPW5 1226 aa8.97□□□□□ -0.97
TRPS1-203ENST00000395715 HNRNPCL2B2RXH8 293 aa8.97□□□□□ -0.97
TRPS1-203ENST00000395715 HNRNPCL1O60812 293 aaKnown RBP8.97□□□□□ -0.97
TRPS1-203ENST00000395715 HHATQ5VTY9 493 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms