RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 EPHA10Q5JZY3 1008 aa19.1■□□□□ 0.65
EFEMP1-202ENST00000394555 FMR1NBQ8N0W7 255 aaPredicted RBP19.1■□□□□ 0.65
EFEMP1-202ENST00000394555 A0A0G2JLW4 131 aa19.1■□□□□ 0.65
EFEMP1-202ENST00000394555 MCMDC2Q4G0Z9 681 aa19.1■□□□□ 0.65
EFEMP1-202ENST00000394555 ILDR1Q86SU0 546 aaPredicted RBP19.1■□□□□ 0.65
EFEMP1-202ENST00000394555 CCDC150Q8NCX0 1101 aa19.1■□□□□ 0.65
EFEMP1-202ENST00000394555 PTPRUQ92729 1446 aa19.1■□□□□ 0.65
EFEMP1-202ENST00000394555 URI1O94763 535 aaPredicted RBP19.09■□□□□ 0.65
EFEMP1-202ENST00000394555 MYL6BP14649 208 aa19.09■□□□□ 0.65
EFEMP1-202ENST00000394555 TFCP2Q12800 502 aa19.09■□□□□ 0.65
EFEMP1-202ENST00000394555 STK38Q15208 465 aa19.09■□□□□ 0.65
EFEMP1-202ENST00000394555 DHX32Q7L7V1 743 aaKnown RBP19.09■□□□□ 0.65
EFEMP1-202ENST00000394555 MNS1Q8NEH6 495 aa19.09■□□□□ 0.65
EFEMP1-202ENST00000394555 LLPHQ9BRT6 129 aaKnown RBP19.09■□□□□ 0.65
EFEMP1-202ENST00000394555 KIAA1468Q9P260 1216 aa19.09■□□□□ 0.65
EFEMP1-202ENST00000394555 PLA2G4AP47712 749 aa19.09■□□□□ 0.65
EFEMP1-202ENST00000394555 HNRNPH2P55795 449 aaKnown RBP19.09■□□□□ 0.65
EFEMP1-202ENST00000394555 CCDC93Q567U6 631 aa19.09■□□□□ 0.65
EFEMP1-202ENST00000394555 TMCO3Q6UWJ1 677 aa19.09■□□□□ 0.65
EFEMP1-202ENST00000394555 SEC31AO94979 1220 aaKnown RBP19.09■□□□□ 0.65
EFEMP1-202ENST00000394555 EPC1Q9H2F5 836 aa19.09■□□□□ 0.65
EFEMP1-202ENST00000394555 ZNF609O15014 1411 aa19.08■□□□□ 0.65
EFEMP1-202ENST00000394555 DDX58O95786 925 aaKnown RBP19.08■□□□□ 0.65
EFEMP1-202ENST00000394555 KCND1Q9NSA2 647 aa19.08■□□□□ 0.65
EFEMP1-202ENST00000394555 IGKV5-2P06315 115 aa19.08■□□□□ 0.64
EFEMP1-202ENST00000394555 CYP2C19P33261 490 aa19.08■□□□□ 0.64
EFEMP1-202ENST00000394555 GOLGA8FQ08AF8 430 aa19.08■□□□□ 0.64
EFEMP1-202ENST00000394555 GOLGA8DPQ0D2H9 430 aa19.08■□□□□ 0.64
EFEMP1-202ENST00000394555 DBNDD2Q9BQY9 259 aa19.08■□□□□ 0.64
EFEMP1-202ENST00000394555 CLIC4Q9Y696 253 aa19.08■□□□□ 0.64
EFEMP1-202ENST00000394555 PSDA5PKW4 1024 aaPredicted RBP19.07■□□□□ 0.64
EFEMP1-202ENST00000394555 TMX1Q9H3N1 280 aa19.07■□□□□ 0.64
EFEMP1-202ENST00000394555 TNRQ92752 1358 aa19.07■□□□□ 0.64
EFEMP1-202ENST00000394555 ATP1A3P13637 1013 aa19.07■□□□□ 0.64
EFEMP1-202ENST00000394555 ATP5JP18859 108 aa19.07■□□□□ 0.64
EFEMP1-202ENST00000394555 ETF1P62495 437 aaKnown RBP19.07■□□□□ 0.64
EFEMP1-202ENST00000394555 TPM4P67936 248 aa19.07■□□□□ 0.64
EFEMP1-202ENST00000394555 NEK11Q8NG66 645 aa19.07■□□□□ 0.64
EFEMP1-202ENST00000394555 ARGLU1Q9NWB6 273 aaPredicted RBP19.07■□□□□ 0.64
EFEMP1-202ENST00000394555 JCADQ9P266 1359 aa19.06■□□□□ 0.64
EFEMP1-202ENST00000394555 SLC3A2P08195 630 aaKnown RBP19.06■□□□□ 0.64
EFEMP1-202ENST00000394555 TNNI3KQ59H18 835 aa19.06■□□□□ 0.64
EFEMP1-202ENST00000394555 C1orf141Q5JVX7 400 aa19.06■□□□□ 0.64
EFEMP1-202ENST00000394555 ADALQ6DHV7 355 aa19.06■□□□□ 0.64
EFEMP1-202ENST00000394555 FPGT-TNNI3KV9GXZ4 949 aa19.06■□□□□ 0.64
EFEMP1-202ENST00000394555 PIK3C2AO00443 1686 aa19.06■□□□□ 0.64
EFEMP1-202ENST00000394555 AKAP4Q5JQC9 854 aa19.06■□□□□ 0.64
EFEMP1-202ENST00000394555 CYB5RLQ6IPT4 315 aa19.06■□□□□ 0.64
EFEMP1-202ENST00000394555 CARD6Q9BX69 1037 aa19.06■□□□□ 0.64
EFEMP1-202ENST00000394555 RAB11FIP4Q86YS3 637 aa19.06■□□□□ 0.64
EFEMP1-202ENST00000394555 ORC3Q9UBD5 711 aaPredicted RBP19.06■□□□□ 0.64
EFEMP1-202ENST00000394555 MYD88Q99836 296 aa19.05■□□□□ 0.64
EFEMP1-202ENST00000394555 UTP14AQ9BVJ6 771 aaKnown RBP19.05■□□□□ 0.64
EFEMP1-202ENST00000394555 ZCCHC17Q9NP64 241 aaKnown RBP19.05■□□□□ 0.64
EFEMP1-202ENST00000394555 GJB4Q9NTQ9 266 aa19.05■□□□□ 0.64
EFEMP1-202ENST00000394555 RGPD8O14715 1765 aaPredicted RBP19.05■□□□□ 0.64
EFEMP1-202ENST00000394555 RNMTO43148 476 aaKnown RBP19.05■□□□□ 0.64
EFEMP1-202ENST00000394555 NEXNQ0ZGT2 675 aa19.05■□□□□ 0.64
EFEMP1-202ENST00000394555 GPHNQ9NQX3 736 aaPredicted RBP19.05■□□□□ 0.64
EFEMP1-202ENST00000394555 HMGB1P09429 215 aaKnown RBP19.04■□□□□ 0.64
EFEMP1-202ENST00000394555 PDIA3P30101 505 aaKnown RBP19.04■□□□□ 0.64
EFEMP1-202ENST00000394555 FANCCQ00597 558 aa19.04■□□□□ 0.64
EFEMP1-202ENST00000394555 PLEKHO1Q53GL0 409 aaPredicted RBP19.04■□□□□ 0.64
EFEMP1-202ENST00000394555 CAPN2P17655 700 aa19.04■□□□□ 0.64
EFEMP1-202ENST00000394555 PIP4K2AP48426 406 aaPredicted RBP19.04■□□□□ 0.64
EFEMP1-202ENST00000394555 GNL2Q13823 731 aaKnown RBP19.04■□□□□ 0.64
EFEMP1-202ENST00000394555 GOLIM4O00461 696 aa19.03■□□□□ 0.64
EFEMP1-202ENST00000394555 SERPINC1P01008 464 aa19.03■□□□□ 0.64
EFEMP1-202ENST00000394555 TEX35Q5T0J7 233 aa19.03■□□□□ 0.64
EFEMP1-202ENST00000394555 ATL3Q6DD88 541 aa19.03■□□□□ 0.64
EFEMP1-202ENST00000394555 LINC00301Q8NCQ3 95 aa19.03■□□□□ 0.64
EFEMP1-202ENST00000394555 ZBTB9Q96C00 473 aa19.03■□□□□ 0.64
EFEMP1-202ENST00000394555 NEUROD6Q96NK8 337 aa19.03■□□□□ 0.64
EFEMP1-202ENST00000394555 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.03■□□□□ 0.64
EFEMP1-202ENST00000394555 ZNF202O95125 648 aa19.03■□□□□ 0.64
EFEMP1-202ENST00000394555 RTEL1Q9NZ71 1219 aa19.03■□□□□ 0.64
EFEMP1-202ENST00000394555 CARMIL3Q8ND23 1372 aa19.03■□□□□ 0.64
EFEMP1-202ENST00000394555 IP6K1Q92551 441 aa19.03■□□□□ 0.64
EFEMP1-202ENST00000394555 CCDC34Q96HJ3 373 aa19.03■□□□□ 0.64
EFEMP1-202ENST00000394555 E7EWF7 191 aa19.02■□□□□ 0.64
EFEMP1-202ENST00000394555 FDPSP14324 419 aaKnown RBP19.02■□□□□ 0.64
EFEMP1-202ENST00000394555 CFAP100Q494V2 611 aa19.02■□□□□ 0.64
EFEMP1-202ENST00000394555 HSP90AA4PQ58FG1 418 aa19.02■□□□□ 0.64
EFEMP1-202ENST00000394555 DPF2Q92785 391 aa19.02■□□□□ 0.64
EFEMP1-202ENST00000394555 DIP2BQ9P265 1576 aa19.02■□□□□ 0.64
EFEMP1-202ENST00000394555 NEURL1BA8MQ27 555 aa19.02■□□□□ 0.63
EFEMP1-202ENST00000394555 SPTLC2O15270 562 aa19.02■□□□□ 0.63
EFEMP1-202ENST00000394555 NLRP12P59046 1061 aa19.02■□□□□ 0.63
EFEMP1-202ENST00000394555 GCKRQ14397 625 aa19.02■□□□□ 0.63
EFEMP1-202ENST00000394555 NCAPHQ15003 741 aa19.02■□□□□ 0.63
EFEMP1-202ENST00000394555 DDX21Q9NR30 783 aaKnown RBP eCLIP19.02■□□□□ 0.63
EFEMP1-202ENST00000394555 UTYO14607 1347 aa19.01■□□□□ 0.63
EFEMP1-202ENST00000394555 FANCGO15287 622 aa19.01■□□□□ 0.63
EFEMP1-202ENST00000394555 ZRANB2O95218 330 aaKnown RBP eCLIP19.01■□□□□ 0.63
EFEMP1-202ENST00000394555 MARCKSP29966 332 aaPredicted RBP19.01■□□□□ 0.63
EFEMP1-202ENST00000394555 UBASH3AP57075 661 aa19.01■□□□□ 0.63
EFEMP1-202ENST00000394555 ST5P78524 1137 aa19.01■□□□□ 0.63
EFEMP1-202ENST00000394555 SLC39A6Q13433 755 aa19.01■□□□□ 0.63
EFEMP1-202ENST00000394555 TSPOAP1O95153 1857 aa19.01■□□□□ 0.63
EFEMP1-202ENST00000394555 EVCP57679 992 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms