RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 PTPN12Q05209 780 aaKnown RBP19.51■□□□□ 0.71
SIPA1-201ENST00000394224 ARHGAP29Q52LW3 1261 aa19.51■□□□□ 0.71
SIPA1-201ENST00000394224 ANKRD7Q92527 254 aa19.51■□□□□ 0.71
SIPA1-201ENST00000394224 ANO10Q9NW15 660 aa19.5■□□□□ 0.71
SIPA1-201ENST00000394224 DDX21Q9NR30 783 aaKnown RBP eCLIP19.5■□□□□ 0.71
SIPA1-201ENST00000394224 E7EWF7 191 aa19.5■□□□□ 0.71
SIPA1-201ENST00000394224 ALDH1L1O75891 902 aa19.5■□□□□ 0.71
SIPA1-201ENST00000394224 DHX40Q8IX18 779 aaKnown RBP19.5■□□□□ 0.71
SIPA1-201ENST00000394224 PAG1Q9NWQ8 432 aa19.5■□□□□ 0.71
SIPA1-201ENST00000394224 CLTCQ00610 1675 aaKnown RBP19.49■□□□□ 0.71
SIPA1-201ENST00000394224 A1BGP04217 495 aa19.49■□□□□ 0.71
SIPA1-201ENST00000394224 DHX32Q7L7V1 743 aaKnown RBP19.49■□□□□ 0.71
SIPA1-201ENST00000394224 OGFRQ9NZT2 677 aa19.49■□□□□ 0.71
SIPA1-201ENST00000394224 SLC3A2P08195 630 aaKnown RBP19.49■□□□□ 0.71
SIPA1-201ENST00000394224 KAT6BQ8WYB5 2073 aa19.49■□□□□ 0.71
SIPA1-201ENST00000394224 CDK11BP21127 795 aaKnown RBP19.49■□□□□ 0.71
SIPA1-201ENST00000394224 ADD1P35611 737 aaKnown RBP19.49■□□□□ 0.71
SIPA1-201ENST00000394224 TTLL7Q6ZT98 887 aa19.49■□□□□ 0.71
SIPA1-201ENST00000394224 SYNE4Q8N205 404 aa19.49■□□□□ 0.71
SIPA1-201ENST00000394224 MNS1Q8NEH6 495 aa19.49■□□□□ 0.71
SIPA1-201ENST00000394224 USP31Q70CQ4 1352 aa19.48■□□□□ 0.71
SIPA1-201ENST00000394224 KLHL10Q6JEL2 608 aa19.48■□□□□ 0.71
SIPA1-201ENST00000394224 TRMT44Q8IYL2 757 aaKnown RBP19.48■□□□□ 0.71
SIPA1-201ENST00000394224 ADORA1P30542 326 aa19.48■□□□□ 0.71
SIPA1-201ENST00000394224 PNOCQ13519 176 aa19.48■□□□□ 0.71
SIPA1-201ENST00000394224 NFXL1Q6ZNB6 911 aa19.48■□□□□ 0.71
SIPA1-201ENST00000394224 MRPS27Q92552 414 aaKnown RBP19.48■□□□□ 0.71
SIPA1-201ENST00000394224 PAXBP1Q9Y5B6 917 aa19.48■□□□□ 0.71
SIPA1-201ENST00000394224 U3KPZ7 1027 aaPredicted RBP19.48■□□□□ 0.71
SIPA1-201ENST00000394224 FAM160A1Q05DH4 1040 aa19.47■□□□□ 0.71
SIPA1-201ENST00000394224 KARSQ15046 597 aaKnown RBP19.47■□□□□ 0.71
SIPA1-201ENST00000394224 BBXQ8WY36 941 aaPredicted RBP19.47■□□□□ 0.71
SIPA1-201ENST00000394224 ZKSCAN3Q9BRR0 538 aa19.47■□□□□ 0.71
SIPA1-201ENST00000394224 SNAP23O00161 211 aa19.47■□□□□ 0.71
SIPA1-201ENST00000394224 HSPD1P10809 573 aaKnown RBP19.47■□□□□ 0.71
SIPA1-201ENST00000394224 GPTP24298 496 aa19.47■□□□□ 0.71
SIPA1-201ENST00000394224 PDIA3P30101 505 aaKnown RBP19.47■□□□□ 0.71
SIPA1-201ENST00000394224 KRT32Q14532 448 aa19.47■□□□□ 0.71
SIPA1-201ENST00000394224 TEX35Q5T0J7 233 aa19.47■□□□□ 0.71
SIPA1-201ENST00000394224 RALYLQ86SE5 291 aaKnown RBP19.47■□□□□ 0.71
SIPA1-201ENST00000394224 ZNF396Q96N95 335 aaPredicted RBP19.47■□□□□ 0.71
SIPA1-201ENST00000394224 DESI2Q9BSY9 194 aa19.47■□□□□ 0.71
SIPA1-201ENST00000394224 RNF216Q9NWF9 866 aaPredicted RBP19.47■□□□□ 0.71
SIPA1-201ENST00000394224 NRKQ7Z2Y5 1582 aa19.47■□□□□ 0.71
SIPA1-201ENST00000394224 CTIFO43310 598 aaKnown RBP19.46■□□□□ 0.71
SIPA1-201ENST00000394224 IDH1O75874 414 aaKnown RBP19.46■□□□□ 0.71
SIPA1-201ENST00000394224 HELBQ8NG08 1087 aaPredicted RBP19.46■□□□□ 0.71
SIPA1-201ENST00000394224 DPF2Q92785 391 aa19.46■□□□□ 0.71
SIPA1-201ENST00000394224 ZNF609O15014 1411 aa19.46■□□□□ 0.71
SIPA1-201ENST00000394224 hCG_1642624A0A1W2PR95 340 aa19.46■□□□□ 0.71
SIPA1-201ENST00000394224 REREQ9P2R6 1566 aa19.46■□□□□ 0.71
SIPA1-201ENST00000394224 TMEM232C9JQI7 657 aa19.46■□□□□ 0.71
SIPA1-201ENST00000394224 CCZ1BP86790 482 aa19.46■□□□□ 0.71
SIPA1-201ENST00000394224 CCZ1P86791 482 aaPredicted RBP19.46■□□□□ 0.71
SIPA1-201ENST00000394224 GTPBP4Q9BZE4 634 aaKnown RBP19.46■□□□□ 0.71
SIPA1-201ENST00000394224 ELP1O95163 1332 aa19.45■□□□□ 0.7
SIPA1-201ENST00000394224 M0R2C6 588 aa19.45■□□□□ 0.7
SIPA1-201ENST00000394224 KRT222Q8N1A0 295 aa19.45■□□□□ 0.7
SIPA1-201ENST00000394224 ADAMTS13Q76LX8 1427 aa19.45■□□□□ 0.7
SIPA1-201ENST00000394224 FOXN1O15353 648 aa19.45■□□□□ 0.7
SIPA1-201ENST00000394224 SLU7O95391 586 aaKnown RBP19.45■□□□□ 0.7
SIPA1-201ENST00000394224 PDIA6Q15084 440 aa19.45■□□□□ 0.7
SIPA1-201ENST00000394224 GRAMD1CQ8IYS0 662 aa19.45■□□□□ 0.7
SIPA1-201ENST00000394224 HINFPQ9BQA5 517 aa19.45■□□□□ 0.7
SIPA1-201ENST00000394224 CARD6Q9BX69 1037 aa19.45■□□□□ 0.7
SIPA1-201ENST00000394224 NAT10Q9H0A0 1025 aaKnown RBP19.45■□□□□ 0.7
SIPA1-201ENST00000394224 ARMCX5Q6P1M9 558 aa19.45■□□□□ 0.7
SIPA1-201ENST00000394224 ZSCAN16Q9H4T2 348 aaPredicted RBP19.45■□□□□ 0.7
SIPA1-201ENST00000394224 ZNF202O95125 648 aa19.44■□□□□ 0.7
SIPA1-201ENST00000394224 ADKP55263 362 aaKnown RBP19.44■□□□□ 0.7
SIPA1-201ENST00000394224 NEK11Q8NG66 645 aa19.44■□□□□ 0.7
SIPA1-201ENST00000394224 OSBP2Q969R2 916 aa19.44■□□□□ 0.7
SIPA1-201ENST00000394224 HMG20BQ9P0W2 317 aa19.44■□□□□ 0.7
SIPA1-201ENST00000394224 SPTLC2O15270 562 aa19.44■□□□□ 0.7
SIPA1-201ENST00000394224 GPIHBP1Q8IV16 184 aa19.44■□□□□ 0.7
SIPA1-201ENST00000394224 PLCD3Q8N3E9 789 aa19.44■□□□□ 0.7
SIPA1-201ENST00000394224 NPHP4O75161 1426 aaPredicted RBP19.44■□□□□ 0.7
SIPA1-201ENST00000394224 PRC1O43663 620 aa19.44■□□□□ 0.7
SIPA1-201ENST00000394224 E4F1Q66K89 784 aaPredicted RBP19.44■□□□□ 0.7
SIPA1-201ENST00000394224 ILDR1Q86SU0 546 aaPredicted RBP19.44■□□□□ 0.7
SIPA1-201ENST00000394224 A0A1B0GUL7 405 aa19.43■□□□□ 0.7
SIPA1-201ENST00000394224 KIF28PB7ZC32 967 aa19.43■□□□□ 0.7
SIPA1-201ENST00000394224 CABP4P57796 275 aa19.43■□□□□ 0.7
SIPA1-201ENST00000394224 UBXN4Q92575 508 aa19.43■□□□□ 0.7
SIPA1-201ENST00000394224 FAM89AQ96GI7 184 aa19.43■□□□□ 0.7
SIPA1-201ENST00000394224 SENP2Q9HC62 589 aa19.43■□□□□ 0.7
SIPA1-201ENST00000394224 UBASH3AP57075 661 aa19.43■□□□□ 0.7
SIPA1-201ENST00000394224 SLC4A8Q2Y0W8 1093 aa19.43■□□□□ 0.7
SIPA1-201ENST00000394224 IRX2Q9BZI1 471 aaPredicted RBP19.43■□□□□ 0.7
SIPA1-201ENST00000394224 DDX41Q9UJV9 622 aaKnown RBP19.43■□□□□ 0.7
SIPA1-201ENST00000394224 HDAC5Q9UQL6 1122 aa19.43■□□□□ 0.7
SIPA1-201ENST00000394224 STX17P56962 302 aa19.43■□□□□ 0.7
SIPA1-201ENST00000394224 TTC39AQ5SRH9 613 aa19.43■□□□□ 0.7
SIPA1-201ENST00000394224 STAMQ92783 540 aa19.43■□□□□ 0.7
SIPA1-201ENST00000394224 TRHP20396 242 aaPredicted RBP19.42■□□□□ 0.7
SIPA1-201ENST00000394224 RBM6P78332 1123 aaKnown RBP19.42■□□□□ 0.7
SIPA1-201ENST00000394224 SCARF1Q14162 830 aa19.42■□□□□ 0.7
SIPA1-201ENST00000394224 PPP1R13BQ96KQ4 1090 aa19.42■□□□□ 0.7
SIPA1-201ENST00000394224 IQSEC3Q9UPP2 1182 aaPredicted RBP19.42■□□□□ 0.7
SIPA1-201ENST00000394224 TFRCP02786 760 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms