RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 ATP6V1AP38606 617 aa10.75□□□□□ -0.69
TDP1-202ENST00000393452 NASPP49321 788 aaPredicted RBP10.75□□□□□ -0.69
TDP1-202ENST00000393452 EXOSC10Q01780 885 aaKnown RBP10.75□□□□□ -0.69
TDP1-202ENST00000393452 FOXD4L6Q3SYB3 417 aaPredicted RBP10.75□□□□□ -0.69
TDP1-202ENST00000393452 LRSAM1Q6UWE0 723 aa10.75□□□□□ -0.69
TDP1-202ENST00000393452 FOXD4L3Q6VB84 417 aaPredicted RBP10.75□□□□□ -0.69
TDP1-202ENST00000393452 DHX32Q7L7V1 743 aaKnown RBP10.75□□□□□ -0.69
TDP1-202ENST00000393452 GTF3C6Q969F1 213 aa10.75□□□□□ -0.69
TDP1-202ENST00000393452 ARAP2Q8WZ64 1704 aa10.75□□□□□ -0.69
TDP1-202ENST00000393452 FOXP2O15409 715 aa10.74□□□□□ -0.69
TDP1-202ENST00000393452 CAMTA2O94983 1202 aa10.74□□□□□ -0.69
TDP1-202ENST00000393452 PDE8BO95263 885 aa10.74□□□□□ -0.69
TDP1-202ENST00000393452 ZAP70P43403 619 aa10.74□□□□□ -0.69
TDP1-202ENST00000393452 ITPK1Q13572 414 aa10.74□□□□□ -0.69
TDP1-202ENST00000393452 LARP1BQ659C4 914 aaKnown RBP10.74□□□□□ -0.69
TDP1-202ENST00000393452 Q6ZUG5 572 aa10.74□□□□□ -0.69
TDP1-202ENST00000393452 ACSBG1Q96GR2 724 aa10.74□□□□□ -0.69
TDP1-202ENST00000393452 CNNM1Q9NRU3 951 aa10.74□□□□□ -0.69
TDP1-202ENST00000393452 COL5A3P25940 1745 aaPredicted RBP10.74□□□□□ -0.69
TDP1-202ENST00000393452 DDX60Q8IY21 1712 aaKnown RBP10.74□□□□□ -0.69
TDP1-202ENST00000393452 MCAMP43121 646 aa10.74□□□□□ -0.69
TDP1-202ENST00000393452 APPBP2Q92624 585 aa10.74□□□□□ -0.69
TDP1-202ENST00000393452 SYAP1Q96A49 352 aaPredicted RBP10.74□□□□□ -0.69
TDP1-202ENST00000393452 ANO8Q9HCE9 1232 aaPredicted RBP10.74□□□□□ -0.69
TDP1-202ENST00000393452 RTN4Q9NQC3 1192 aaKnown RBP10.74□□□□□ -0.69
TDP1-202ENST00000393452 LAMB2P55268 1798 aa10.74□□□□□ -0.69
TDP1-202ENST00000393452 MYO5AQ9Y4I1 1855 aaKnown RBP10.73□□□□□ -0.69
TDP1-202ENST00000393452 SYCE3A1L190 88 aa10.73□□□□□ -0.69
TDP1-202ENST00000393452 E7EWF7 191 aa10.73□□□□□ -0.69
TDP1-202ENST00000393452 DTNBO60941 627 aa10.73□□□□□ -0.69
TDP1-202ENST00000393452 UBE2HP62256 183 aa10.73□□□□□ -0.69
TDP1-202ENST00000393452 SUSD4Q5VX71 490 aa10.73□□□□□ -0.69
TDP1-202ENST00000393452 FBXL16Q8N461 479 aa10.73□□□□□ -0.69
TDP1-202ENST00000393452 RBSNQ9H1K0 784 aa10.73□□□□□ -0.69
TDP1-202ENST00000393452 FGFR2P21802 821 aa10.73□□□□□ -0.69
TDP1-202ENST00000393452 ARID4AP29374 1257 aaPredicted RBP10.73□□□□□ -0.69
TDP1-202ENST00000393452 PARP10Q53GL7 1025 aa10.73□□□□□ -0.69
TDP1-202ENST00000393452 PI16Q6UXB8 463 aa10.73□□□□□ -0.69
TDP1-202ENST00000393452 SMARCC1Q92922 1105 aaPredicted RBP10.73□□□□□ -0.69
TDP1-202ENST00000393452 PPP1R9BQ96SB3 815 aa10.73□□□□□ -0.69
TDP1-202ENST00000393452 MROH5Q6ZUA9 1318 aa10.72□□□□□ -0.69
TDP1-202ENST00000393452 RTL9Q8NET4 1388 aa10.72□□□□□ -0.69
TDP1-202ENST00000393452 ATRNO75882 1429 aa10.72□□□□□ -0.69
TDP1-202ENST00000393452 A0A0G2JLW4 131 aa10.72□□□□□ -0.69
TDP1-202ENST00000393452 VPS37CA5D8V6 355 aaPredicted RBP10.72□□□□□ -0.69
TDP1-202ENST00000393452 NUTM2BA6NNL0 878 aaPredicted RBP10.72□□□□□ -0.69
TDP1-202ENST00000393452 NUTM2EB1AL46 878 aaPredicted RBP10.72□□□□□ -0.69
TDP1-202ENST00000393452 DNM1Q05193 864 aaKnown RBP10.72□□□□□ -0.69
TDP1-202ENST00000393452 CSPP1Q1MSJ5 1256 aa10.72□□□□□ -0.69
TDP1-202ENST00000393452 CDC37L1Q7L3B6 337 aa10.72□□□□□ -0.69
TDP1-202ENST00000393452 NUTM2AQ8IVF1 878 aaPredicted RBP10.72□□□□□ -0.69
TDP1-202ENST00000393452 BRF1Q92994 677 aa10.72□□□□□ -0.69
TDP1-202ENST00000393452 LLPHQ9BRT6 129 aaKnown RBP10.72□□□□□ -0.69
TDP1-202ENST00000393452 UTP14AQ9BVJ6 771 aaKnown RBP10.72□□□□□ -0.69
TDP1-202ENST00000393452 CTNNA3Q9UI47 895 aa10.72□□□□□ -0.69
TDP1-202ENST00000393452 BCORQ6W2J9 1755 aa10.72□□□□□ -0.69
TDP1-202ENST00000393452 TOM1O60784 492 aa10.72□□□□□ -0.69
TDP1-202ENST00000393452 PFKFB2O60825 505 aa10.72□□□□□ -0.69
TDP1-202ENST00000393452 CCDC173Q0VFZ6 552 aa10.72□□□□□ -0.69
TDP1-202ENST00000393452 STK3Q13188 491 aa10.72□□□□□ -0.69
TDP1-202ENST00000393452 PUM3Q15397 648 aaKnown RBP10.72□□□□□ -0.69
TDP1-202ENST00000393452 KLHL34Q8N239 644 aa10.72□□□□□ -0.69
TDP1-202ENST00000393452 SMARCC2Q8TAQ2 1214 aa10.72□□□□□ -0.69
TDP1-202ENST00000393452 PUS7LQ9H0K6 701 aaKnown RBP10.72□□□□□ -0.69
TDP1-202ENST00000393452 FIBPO43427 364 aa10.71□□□□□ -0.69
TDP1-202ENST00000393452 ADD2P35612 726 aa10.71□□□□□ -0.69
TDP1-202ENST00000393452 EVCP57679 992 aa10.71□□□□□ -0.69
TDP1-202ENST00000393452 SCRN1Q12765 414 aa10.71□□□□□ -0.69
TDP1-202ENST00000393452 TTF1Q15361 905 aaPredicted RBP10.71□□□□□ -0.69
TDP1-202ENST00000393452 WASHC4Q2M389 1173 aa10.71□□□□□ -0.69
TDP1-202ENST00000393452 CCDC102BQ68D86 513 aa10.71□□□□□ -0.69
TDP1-202ENST00000393452 TTLL5Q6EMB2 1281 aa10.71□□□□□ -0.69
TDP1-202ENST00000393452 LPIN2Q92539 896 aa10.71□□□□□ -0.69
TDP1-202ENST00000393452 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.71□□□□□ -0.69
TDP1-202ENST00000393452 PHF14O94880 888 aa10.7□□□□□ -0.7
TDP1-202ENST00000393452 NTSR2O95665 410 aa10.7□□□□□ -0.7
TDP1-202ENST00000393452 FGAP02671 866 aa10.7□□□□□ -0.7
TDP1-202ENST00000393452 HCLS1P14317 486 aaPredicted RBP10.7□□□□□ -0.7
TDP1-202ENST00000393452 ZSCAN25Q6NSZ9 544 aa10.7□□□□□ -0.7
TDP1-202ENST00000393452 LRRC2Q9BYS8 371 aa10.7□□□□□ -0.7
TDP1-202ENST00000393452 DOCK2Q92608 1830 aa10.7□□□□□ -0.7
TDP1-202ENST00000393452 KCNQ2O43526 872 aa10.7□□□□□ -0.7
TDP1-202ENST00000393452 JAK2O60674 1132 aa10.7□□□□□ -0.7
TDP1-202ENST00000393452 UQCRFS1P1P0C7P4 283 aa10.7□□□□□ -0.7
TDP1-202ENST00000393452 HSP90B1P14625 803 aaKnown RBP10.7□□□□□ -0.7
TDP1-202ENST00000393452 PHKA1P46020 1223 aa10.7□□□□□ -0.7
TDP1-202ENST00000393452 UBE3CQ15386 1083 aa10.7□□□□□ -0.7
TDP1-202ENST00000393452 ELP1O95163 1332 aa10.7□□□□□ -0.7
TDP1-202ENST00000393452 BCL9LQ86UU0 1499 aa10.7□□□□□ -0.7
TDP1-202ENST00000393452 GPAA1O43292 621 aa10.69□□□□□ -0.7
TDP1-202ENST00000393452 KRT85P78386 507 aa10.69□□□□□ -0.7
TDP1-202ENST00000393452 FGD1P98174 961 aa10.69□□□□□ -0.7
TDP1-202ENST00000393452 IMMTQ16891 758 aaKnown RBP10.69□□□□□ -0.7
TDP1-202ENST00000393452 CCDC183Q5T5S1 534 aa10.69□□□□□ -0.7
TDP1-202ENST00000393452 CLEC4GQ6UXB4 293 aa10.69□□□□□ -0.7
TDP1-202ENST00000393452 ZNF274Q96GC6 653 aaPredicted RBP10.69□□□□□ -0.7
TDP1-202ENST00000393452 RRAGDQ9NQL2 400 aaPredicted RBP10.69□□□□□ -0.7
TDP1-202ENST00000393452 A0A0G2JS52 829 aa10.69□□□□□ -0.7
TDP1-202ENST00000393452 RGL2O15211 777 aa10.69□□□□□ -0.7
TDP1-202ENST00000393452 VPS72Q15906 364 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms