RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 CELF2-AS1Q8N7Q2 184 aa4.32□□□□□ -1.72
XRN1-202ENST00000392981 ENAHQ8N8S7 591 aaPredicted RBP4.32□□□□□ -1.72
XRN1-202ENST00000392981 CCDC8Q9H0W5 538 aaPredicted RBP4.32□□□□□ -1.72
XRN1-202ENST00000392981 NPHS2Q9NP85 383 aa4.32□□□□□ -1.72
XRN1-202ENST00000392981 PRKAG3Q9UGI9 489 aa4.32□□□□□ -1.72
XRN1-202ENST00000392981 LDHCP07864 332 aa4.32□□□□□ -1.72
XRN1-202ENST00000392981 ZKSCAN2Q63HK3 967 aa4.32□□□□□ -1.72
XRN1-202ENST00000392981 IQSEC1Q6DN90 963 aa4.32□□□□□ -1.72
XRN1-202ENST00000392981 WDR66Q8TBY9 1149 aa4.32□□□□□ -1.72
XRN1-202ENST00000392981 TRERF1Q96PN7 1200 aa4.32□□□□□ -1.72
XRN1-202ENST00000392981 ARNT2Q9HBZ2 717 aa4.32□□□□□ -1.72
XRN1-202ENST00000392981 C3orf80F5H4A9 247 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 MPHOSPH10O00566 681 aaKnown RBP4.31□□□□□ -1.72
XRN1-202ENST00000392981 DHX16O60231 1041 aaKnown RBP4.31□□□□□ -1.72
XRN1-202ENST00000392981 MYBP10242 640 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 MYBL2P10244 700 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 WEE1P30291 646 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 ATN1P54259 1190 aaPredicted RBP4.31□□□□□ -1.72
XRN1-202ENST00000392981 PTPN21Q16825 1174 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 BLOC1S3Q6QNY0 202 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 BICDL1Q6ZP65 573 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 SLC9A9Q8IVB4 645 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 MFSD3Q96ES6 412 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 EIF2AK1Q9BQI3 630 aaKnown RBP4.31□□□□□ -1.72
XRN1-202ENST00000392981 CAAP1Q9H8G2 361 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 MYO15BQ96JP2 1530 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 RRM1P23921 792 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 USP20Q9Y2K6 914 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 THRAP3Q9Y2W1 955 aaKnown RBP4.31□□□□□ -1.72
XRN1-202ENST00000392981 ZBTB39O15060 712 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 XPOTO43592 962 aaKnown RBP4.31□□□□□ -1.72
XRN1-202ENST00000392981 NUCB1Q02818 461 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 COX20Q5RI15 118 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 CLEC4GQ6UXB4 293 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 SELENOOQ9BVL4 669 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 INO80BQ9C086 356 aaPredicted RBP4.31□□□□□ -1.72
XRN1-202ENST00000392981 MAF1Q9H063 256 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 SRA1Q9HD15 236 aaKnown RBP4.31□□□□□ -1.72
XRN1-202ENST00000392981 KLF15Q9UIH9 416 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 STRIP2Q9ULQ0 834 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 SALL2Q9Y467 1007 aaPredicted RBP4.31□□□□□ -1.72
XRN1-202ENST00000392981 AFG3L2Q9Y4W6 797 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 SUPT16HQ9Y5B9 1047 aaKnown RBP4.31□□□□□ -1.72
XRN1-202ENST00000392981 KPNA6O60684 536 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 CTSHP09668 335 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 CBLBQ13191 982 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 DDX46Q7L014 1031 aaKnown RBP4.31□□□□□ -1.72
XRN1-202ENST00000392981 RSRC2Q7L4I2 434 aaKnown RBP4.31□□□□□ -1.72
XRN1-202ENST00000392981 MYLK4Q86YV6 388 aaPredicted RBP4.31□□□□□ -1.72
XRN1-202ENST00000392981 TIFAQ96CG3 184 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 BCO2Q9BYV7 579 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 GPN3Q9UHW5 284 aaPredicted RBP4.31□□□□□ -1.72
XRN1-202ENST00000392981 GTF2A1LQ9UNN4 478 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 GJA3Q9Y6H8 435 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 MAN1A1P33908 653 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 TLR1Q15399 786 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 LDLRAD1Q5T700 205 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 SAMD3Q8N6K7 520 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 PTPRHQ9HD43 1115 aa4.31□□□□□ -1.72
XRN1-202ENST00000392981 GALR2O43603 387 aaPredicted RBP4.3□□□□□ -1.72
XRN1-202ENST00000392981 PDGFAP04085 211 aa4.3□□□□□ -1.72
XRN1-202ENST00000392981 ADCY1Q08828 1119 aa4.3□□□□□ -1.72
XRN1-202ENST00000392981 KCTD2Q14681 263 aa4.3□□□□□ -1.72
XRN1-202ENST00000392981 ACAP2Q15057 778 aa4.3□□□□□ -1.72
XRN1-202ENST00000392981 CCDC74AQ96AQ1 378 aa4.3□□□□□ -1.72
XRN1-202ENST00000392981 HOOK2Q96ED9 719 aa4.3□□□□□ -1.72
XRN1-202ENST00000392981 EMID1Q96A84 441 aaPredicted RBP4.3□□□□□ -1.72
XRN1-202ENST00000392981 CDK5RAP3Q96JB5 506 aa4.3□□□□□ -1.72
XRN1-202ENST00000392981 LUC7LQ9NQ29 371 aaKnown RBP4.3□□□□□ -1.72
XRN1-202ENST00000392981 SLC5A4Q9NY91 659 aa4.3□□□□□ -1.72
XRN1-202ENST00000392981 FOXD3Q9UJU5 478 aaPredicted RBP4.3□□□□□ -1.72
XRN1-202ENST00000392981 PCDHB3Q9Y5E6 796 aa4.3□□□□□ -1.72
XRN1-202ENST00000392981 MORC2Q9Y6X9 1032 aaPredicted RBP4.3□□□□□ -1.72
XRN1-202ENST00000392981 POU5F1Q01860 360 aaKnown RBP4.3□□□□□ -1.72
XRN1-202ENST00000392981 DSC3Q14574 896 aa4.3□□□□□ -1.72
XRN1-202ENST00000392981 ALFQ53S48 1182 aa4.3□□□□□ -1.72
XRN1-202ENST00000392981 MFSD4BQ5TF39 518 aa4.3□□□□□ -1.72
XRN1-202ENST00000392981 TREML1Q86YW5 311 aa4.3□□□□□ -1.72
XRN1-202ENST00000392981 MRGBPQ9NV56 204 aa4.3□□□□□ -1.72
XRN1-202ENST00000392981 TYW1Q9NV66 732 aaKnown RBP4.3□□□□□ -1.72
XRN1-202ENST00000392981 NOL7Q9UMY1 257 aaKnown RBP4.3□□□□□ -1.72
XRN1-202ENST00000392981 ZSCAN20P17040 1043 aaPredicted RBP4.3□□□□□ -1.72
XRN1-202ENST00000392981 ZNF157P51786 506 aaPredicted RBP4.3□□□□□ -1.72
XRN1-202ENST00000392981 TRAF7Q6Q0C0 670 aa4.3□□□□□ -1.72
XRN1-202ENST00000392981 BPHLQ86WA6 291 aaPredicted RBP4.3□□□□□ -1.72
XRN1-202ENST00000392981 IFRD1O00458 451 aaPredicted RBP4.29□□□□□ -1.72
XRN1-202ENST00000392981 TCEA3O75764 348 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 LRRC27Q9C0I9 530 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 RSPH9Q9H1X1 276 aaPredicted RBP4.29□□□□□ -1.72
XRN1-202ENST00000392981 A0A1W2PRU2 124 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 GOLGA6L6A8MZA4 724 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 OPA1O60313 960 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 MT-CO1P00395 513 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 GJA8P48165 433 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 PSMA6P60900 246 aaKnown RBP4.29□□□□□ -1.72
XRN1-202ENST00000392981 CCDC157Q569K6 752 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 GGT6Q6P531 493 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 VASH1Q7L8A9 365 aaPredicted RBP4.29□□□□□ -1.72
XRN1-202ENST00000392981 MKL1Q969V6 931 aa4.29□□□□□ -1.72
XRN1-202ENST00000392981 TAGLN3Q9UI15 199 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms