RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 MCMDC2Q4G0Z9 681 aa21.07■□□□□ 0.96
ERCC2-201ENST00000391941 ZNF594Q96JF6 807 aaPredicted RBP21.07■□□□□ 0.96
ERCC2-201ENST00000391941 CCDC85AQ96PX6 553 aaPredicted RBP21.07■□□□□ 0.96
ERCC2-201ENST00000391941 PAXBP1Q9Y5B6 917 aa21.07■□□□□ 0.96
ERCC2-201ENST00000391941 SYT10Q6XYQ8 523 aa21.07■□□□□ 0.96
ERCC2-201ENST00000391941 TMC6Q7Z403 805 aa21.07■□□□□ 0.96
ERCC2-201ENST00000391941 CCAR2Q8N163 923 aaKnown RBP21.07■□□□□ 0.96
ERCC2-201ENST00000391941 IFNKQ9P0W0 207 aa21.07■□□□□ 0.96
ERCC2-201ENST00000391941 HEG1Q9ULI3 1381 aa21.06■□□□□ 0.96
ERCC2-201ENST00000391941 KRT32Q14532 448 aa21.06■□□□□ 0.96
ERCC2-201ENST00000391941 NYAP1Q6ZVC0 841 aa21.06■□□□□ 0.96
ERCC2-201ENST00000391941 ZNF496Q96IT1 587 aaPredicted RBP21.06■□□□□ 0.96
ERCC2-201ENST00000391941 XPO4Q9C0E2 1151 aaKnown RBP21.06■□□□□ 0.96
ERCC2-201ENST00000391941 NEXNQ0ZGT2 675 aa21.06■□□□□ 0.96
ERCC2-201ENST00000391941 ZNF446Q9NWS9 450 aa21.06■□□□□ 0.96
ERCC2-201ENST00000391941 AMOTQ4VCS5 1084 aa21.05■□□□□ 0.96
ERCC2-201ENST00000391941 STK11IPQ8N1F8 1099 aa21.05■□□□□ 0.96
ERCC2-201ENST00000391941 ENGASEQ8NFI3 743 aa21.05■□□□□ 0.96
ERCC2-201ENST00000391941 EPC1Q9H2F5 836 aa21.05■□□□□ 0.96
ERCC2-201ENST00000391941 SLFN14P0C7P3 912 aa21.05■□□□□ 0.96
ERCC2-201ENST00000391941 RBM6P78332 1123 aaKnown RBP21.05■□□□□ 0.96
ERCC2-201ENST00000391941 MAPK8IP2Q13387 824 aaPredicted RBP21.05■□□□□ 0.96
ERCC2-201ENST00000391941 FEZ1Q99689 392 aa21.05■□□□□ 0.96
ERCC2-201ENST00000391941 RCOR1Q9UKL0 485 aa21.05■□□□□ 0.96
ERCC2-201ENST00000391941 A0A087WZG4 1122 aa21.04■□□□□ 0.96
ERCC2-201ENST00000391941 GCP02774 474 aa21.04■□□□□ 0.96
ERCC2-201ENST00000391941 ATP5JP18859 108 aa21.04■□□□□ 0.96
ERCC2-201ENST00000391941 LMOD1P29536 600 aaPredicted RBP21.04■□□□□ 0.96
ERCC2-201ENST00000391941 RFX5P48382 616 aaPredicted RBP21.04■□□□□ 0.96
ERCC2-201ENST00000391941 E4F1Q66K89 784 aaPredicted RBP21.04■□□□□ 0.96
ERCC2-201ENST00000391941 FAM177A1Q8N128 213 aaPredicted RBP21.04■□□□□ 0.96
ERCC2-201ENST00000391941 ATP1A3P13637 1013 aa21.04■□□□□ 0.96
ERCC2-201ENST00000391941 ARMCX5Q6P1M9 558 aa21.04■□□□□ 0.96
ERCC2-201ENST00000391941 LMBR1LQ6UX01 489 aa21.04■□□□□ 0.96
ERCC2-201ENST00000391941 SMARCC2Q8TAQ2 1214 aa21.04■□□□□ 0.96
ERCC2-201ENST00000391941 ZSCAN16Q9H4T2 348 aaPredicted RBP21.04■□□□□ 0.96
ERCC2-201ENST00000391941 DENND2AQ9ULE3 1009 aa21.04■□□□□ 0.96
ERCC2-201ENST00000391941 ARHGAP23Q9P227 1491 aa21.04■□□□□ 0.96
ERCC2-201ENST00000391941 SLIT1O75093 1534 aa21.03■□□□□ 0.96
ERCC2-201ENST00000391941 NFAT5O94916 1531 aa21.03■□□□□ 0.96
ERCC2-201ENST00000391941 FDPSP14324 419 aaKnown RBP21.03■□□□□ 0.96
ERCC2-201ENST00000391941 ZNF790Q6PG37 636 aa21.03■□□□□ 0.96
ERCC2-201ENST00000391941 MRFAP1L1Q96HT8 127 aa21.03■□□□□ 0.96
ERCC2-201ENST00000391941 TRERF1Q96PN7 1200 aa21.03■□□□□ 0.96
ERCC2-201ENST00000391941 PFKFB2O60825 505 aa21.03■□□□□ 0.96
ERCC2-201ENST00000391941 RXRAP19793 462 aa21.03■□□□□ 0.96
ERCC2-201ENST00000391941 MARCKSP29966 332 aaPredicted RBP21.03■□□□□ 0.96
ERCC2-201ENST00000391941 FAM160A1Q05DH4 1040 aa21.03■□□□□ 0.96
ERCC2-201ENST00000391941 DHX32Q7L7V1 743 aaKnown RBP21.03■□□□□ 0.96
ERCC2-201ENST00000391941 CDC25BP30305 580 aa21.03■□□□□ 0.96
ERCC2-201ENST00000391941 AIFM3Q96NN9 605 aa21.03■□□□□ 0.96
ERCC2-201ENST00000391941 U3KPZ7 1027 aaPredicted RBP21.03■□□□□ 0.96
ERCC2-201ENST00000391941 E7EWF7 191 aa21.02■□□□□ 0.96
ERCC2-201ENST00000391941 PDIA3P30101 505 aaKnown RBP21.02■□□□□ 0.96
ERCC2-201ENST00000391941 ANKRD13DQ6ZTN6 518 aa21.02■□□□□ 0.96
ERCC2-201ENST00000391941 KIF20AO95235 890 aa21.02■□□□□ 0.95
ERCC2-201ENST00000391941 SF3A1Q15459 793 aaKnown RBP21.02■□□□□ 0.95
ERCC2-201ENST00000391941 LMO7Q8WWI1 1683 aa21.01■□□□□ 0.95
ERCC2-201ENST00000391941 CAVIN2O95810 425 aa21.01■□□□□ 0.95
ERCC2-201ENST00000391941 SARM1Q6SZW1 724 aa21.01■□□□□ 0.95
ERCC2-201ENST00000391941 CEP57L1Q8IYX8 460 aa21.01■□□□□ 0.95
ERCC2-201ENST00000391941 THEMISQ8N1K5 641 aaPredicted RBP21.01■□□□□ 0.95
ERCC2-201ENST00000391941 NKX2-3Q8TAU0 364 aa21.01■□□□□ 0.95
ERCC2-201ENST00000391941 USP54Q70EL1 1684 aa21.01■□□□□ 0.95
ERCC2-201ENST00000391941 ANO10Q9NW15 660 aa21.01■□□□□ 0.95
ERCC2-201ENST00000391941 SYCP1Q15431 976 aa21■□□□□ 0.95
ERCC2-201ENST00000391941 LRRC24Q50LG9 513 aa21■□□□□ 0.95
ERCC2-201ENST00000391941 KCNH5Q8NCM2 988 aa21■□□□□ 0.95
ERCC2-201ENST00000391941 FKBP4Q02790 459 aaKnown RBP eCLIP21■□□□□ 0.95
ERCC2-201ENST00000391941 FMR1NBQ8N0W7 255 aaPredicted RBP21■□□□□ 0.95
ERCC2-201ENST00000391941 HAUS7Q99871 368 aa21■□□□□ 0.95
ERCC2-201ENST00000391941 METTL22Q9BUU2 404 aaPredicted RBP21■□□□□ 0.95
ERCC2-201ENST00000391941 M0R2C6 588 aa20.99■□□□□ 0.95
ERCC2-201ENST00000391941 HSPD1P10809 573 aaKnown RBP20.99■□□□□ 0.95
ERCC2-201ENST00000391941 DDX17Q92841 729 aaKnown RBP20.99■□□□□ 0.95
ERCC2-201ENST00000391941 PPP1R13BQ96KQ4 1090 aa20.99■□□□□ 0.95
ERCC2-201ENST00000391941 KIF28PB7ZC32 967 aa20.99■□□□□ 0.95
ERCC2-201ENST00000391941 DPF2Q92785 391 aa20.99■□□□□ 0.95
ERCC2-201ENST00000391941 NLRP2Q9NX02 1062 aa20.99■□□□□ 0.95
ERCC2-201ENST00000391941 MORC2Q9Y6X9 1032 aaPredicted RBP20.99■□□□□ 0.95
ERCC2-201ENST00000391941 UBE2Q2LH0YL09 131 aa20.99■□□□□ 0.95
ERCC2-201ENST00000391941 STK38Q15208 465 aa20.99■□□□□ 0.95
ERCC2-201ENST00000391941 PI16Q6UXB8 463 aa20.99■□□□□ 0.95
ERCC2-201ENST00000391941 ZNF397Q8NF99 534 aaPredicted RBP20.99■□□□□ 0.95
ERCC2-201ENST00000391941 PAG1Q9NWQ8 432 aa20.99■□□□□ 0.95
ERCC2-201ENST00000391941 FANCGO15287 622 aa20.98■□□□□ 0.95
ERCC2-201ENST00000391941 KBTBD3Q8NAB2 608 aa20.98■□□□□ 0.95
ERCC2-201ENST00000391941 MRPS27Q92552 414 aaKnown RBP20.98■□□□□ 0.95
ERCC2-201ENST00000391941 PUS3Q9BZE2 481 aaKnown RBP20.98■□□□□ 0.95
ERCC2-201ENST00000391941 COPRSQ9NQ92 184 aa20.98■□□□□ 0.95
ERCC2-201ENST00000391941 CARMIL3Q8ND23 1372 aa20.98■□□□□ 0.95
ERCC2-201ENST00000391941 NCAPD2Q15021 1401 aa20.97■□□□□ 0.95
ERCC2-201ENST00000391941 PDE4CQ08493 712 aa20.97■□□□□ 0.95
ERCC2-201ENST00000391941 TERF2Q15554 542 aa20.97■□□□□ 0.95
ERCC2-201ENST00000391941 HOMER1Q86YM7 354 aa20.97■□□□□ 0.95
ERCC2-201ENST00000391941 MAST3O60307 1309 aa20.97■□□□□ 0.95
ERCC2-201ENST00000391941 CTAGE5O15320 804 aa20.97■□□□□ 0.95
ERCC2-201ENST00000391941 SLU7O95391 586 aaKnown RBP20.97■□□□□ 0.95
ERCC2-201ENST00000391941 EXOSC10Q01780 885 aaKnown RBP20.97■□□□□ 0.95
ERCC2-201ENST00000391941 NAA16Q6N069 864 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms