RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 A2MP01023 1474 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 ERLIN2O94905 339 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 IL13P35225 146 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 SP4Q02446 784 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 SUCLG2Q96I99 432 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 GDAP1L1Q96MZ0 367 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 CTAGE5O15320 804 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 IFFO1Q0D2I5 559 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 MAATS1Q7Z4T9 603 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 GPATCH11Q8N954 259 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 ZNF652Q9Y2D9 606 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 GOLGA6L10A0A0M3HER8 536 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 GSTTP1A0A1W2PQM5 241 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 SLC27A2O14975 620 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 YEATS4O95619 227 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 STAT6P42226 847 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 PTH1RQ03431 593 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 RAD51AP2Q09MP3 1159 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 ZBTB21Q9ULJ3 1066 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 PRAMEF22A3QJZ6 481 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 VWA3AA6NCI4 1184 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 TSPY3P0CV98 308 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 TSPY8P0CW00 308 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 GJC1P36383 396 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 PTPROQ16827 1216 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 TICAM2Q86XR7 235 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 KSR1Q8IVT5 923 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 ARMT1Q9H993 441 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 UHRF1BP1Q6BDS2 1440 aa5.72□□□□□ -1.49
LTN1-202ENST00000389194 CCDC171Q6TFL3 1326 aa5.71□□□□□ -1.49
LTN1-202ENST00000389194 A0A1B0GUL7 405 aa5.71□□□□□ -1.49
LTN1-202ENST00000389194 TMEM110-MUSTN1A8MSY1 372 aa5.71□□□□□ -1.49
LTN1-202ENST00000389194 AKR1B10O60218 316 aa5.71□□□□□ -1.49
LTN1-202ENST00000389194 CTDSPL2Q05D32 466 aa5.71□□□□□ -1.49
LTN1-202ENST00000389194 LRMPQ12912 555 aa5.71□□□□□ -1.49
LTN1-202ENST00000389194 CTR9Q6PD62 1173 aa5.71□□□□□ -1.49
LTN1-202ENST00000389194 TRMT44Q8IYL2 757 aaKnown RBP5.71□□□□□ -1.49
LTN1-202ENST00000389194 LUC7LQ9NQ29 371 aaKnown RBP5.71□□□□□ -1.49
LTN1-202ENST00000389194 DYNC1I1O14576 645 aa5.71□□□□□ -1.49
LTN1-202ENST00000389194 TCP11L1Q9NUJ3 509 aa5.71□□□□□ -1.49
LTN1-202ENST00000389194 NSFL1CQ9UNZ2 370 aaKnown RBP5.71□□□□□ -1.49
LTN1-202ENST00000389194 IRS4O14654 1257 aaPredicted RBP5.71□□□□□ -1.5
LTN1-202ENST00000389194 AKAP4Q5JQC9 854 aa5.71□□□□□ -1.5
LTN1-202ENST00000389194 LINS1Q8NG48 757 aa5.71□□□□□ -1.5
LTN1-202ENST00000389194 MCM9Q9NXL9 1143 aa5.71□□□□□ -1.5
LTN1-202ENST00000389194 KCNJ14Q9UNX9 436 aa5.71□□□□□ -1.5
LTN1-202ENST00000389194 DENND4BO75064 1496 aaPredicted RBP5.71□□□□□ -1.5
LTN1-202ENST00000389194 HGSO14964 777 aaPredicted RBP5.71□□□□□ -1.5
LTN1-202ENST00000389194 MBD4O95243 580 aa5.71□□□□□ -1.5
LTN1-202ENST00000389194 RBM26Q5T8P6 1007 aaKnown RBP5.71□□□□□ -1.5
LTN1-202ENST00000389194 DZIP3Q86Y13 1208 aaKnown RBP5.71□□□□□ -1.5
LTN1-202ENST00000389194 C8orf37Q96NL8 207 aa5.71□□□□□ -1.5
LTN1-202ENST00000389194 VPS16Q9H269 839 aa5.71□□□□□ -1.5
LTN1-202ENST00000389194 LMBRD1Q9NUN5 540 aa5.71□□□□□ -1.5
LTN1-202ENST00000389194 KDM6BO15054 1643 aa5.71□□□□□ -1.5
LTN1-202ENST00000389194 RIOK3O14730 519 aaKnown RBP5.71□□□□□ -1.5
LTN1-202ENST00000389194 NAA16Q6N069 864 aaPredicted RBP5.71□□□□□ -1.5
LTN1-202ENST00000389194 SMARCC1Q92922 1105 aaPredicted RBP5.71□□□□□ -1.5
LTN1-202ENST00000389194 ZSCAN16Q9H4T2 348 aaPredicted RBP5.71□□□□□ -1.5
LTN1-202ENST00000389194 HMG20BQ9P0W2 317 aa5.71□□□□□ -1.5
LTN1-202ENST00000389194 RSPH14Q9UHP6 348 aa5.71□□□□□ -1.5
LTN1-202ENST00000389194 ABCC1P33527 1531 aa5.71□□□□□ -1.5
LTN1-202ENST00000389194 RNMTO43148 476 aaKnown RBP5.71□□□□□ -1.5
LTN1-202ENST00000389194 RFC4P35249 363 aa5.71□□□□□ -1.5
LTN1-202ENST00000389194 ASIC1P78348 528 aa5.71□□□□□ -1.5
LTN1-202ENST00000389194 ZNF569Q5MCW4 686 aa5.71□□□□□ -1.5
LTN1-202ENST00000389194 SCLT1Q96NL6 688 aa5.71□□□□□ -1.5
LTN1-202ENST00000389194 FEZ1Q99689 392 aa5.71□□□□□ -1.5
LTN1-202ENST00000389194 RNF41Q9H4P4 317 aaPredicted RBP5.71□□□□□ -1.5
LTN1-202ENST00000389194 TFCP2L1Q9NZI6 479 aa5.71□□□□□ -1.5
LTN1-202ENST00000389194 MYO6Q9UM54 1294 aa5.71□□□□□ -1.5
LTN1-202ENST00000389194 FNBP4Q8N3X1 1017 aaPredicted RBP5.7□□□□□ -1.5
LTN1-202ENST00000389194 PSMD1Q99460 953 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 ASXL2Q76L83 1435 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 RIMS2Q9UQ26 1411 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 NSD2O96028 1365 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 ME3Q16798 604 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 SYCP3Q8IZU3 236 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 NPATQ14207 1427 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 KCNQ4P56696 695 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 GSDMDP57764 484 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 GOLGA8FQ08AF8 430 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 GOLGA8DPQ0D2H9 430 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 SLFNL1Q499Z3 407 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 DHX32Q7L7V1 743 aaKnown RBP5.7□□□□□ -1.5
LTN1-202ENST00000389194 PPP1R9BQ96SB3 815 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 RNF113AO15541 343 aaKnown RBP5.7□□□□□ -1.5
LTN1-202ENST00000389194 CALM1P0DP23 149 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 CALM2P0DP24 149 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 CALM3P0DP25 149 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 PAFAH1B1P43034 410 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 DPH6Q7L8W6 267 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 TSG101Q99816 390 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 CBX8Q9HC52 389 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 TNNI2P48788 182 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 NAPAP54920 295 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 PDE4BQ07343 736 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 CALML4Q96GE6 196 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 EXOC1Q9NV70 894 aa5.7□□□□□ -1.5
LTN1-202ENST00000389194 POLR2DO15514 142 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms