RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 PDE4BQ07343 736 aa19.37■□□□□ 0.69
COL4A3BP-203ENST00000380494 LMNTD2Q8IXW0 634 aa19.37■□□□□ 0.69
COL4A3BP-203ENST00000380494 THEMISQ8N1K5 641 aaPredicted RBP19.37■□□□□ 0.69
COL4A3BP-203ENST00000380494 ACTN2P35609 894 aa19.36■□□□□ 0.69
COL4A3BP-203ENST00000380494 NME9Q86XW9 330 aa19.36■□□□□ 0.69
COL4A3BP-203ENST00000380494 PPP1R9BQ96SB3 815 aa19.36■□□□□ 0.69
COL4A3BP-203ENST00000380494 ELF2Q15723 593 aa19.36■□□□□ 0.69
COL4A3BP-203ENST00000380494 UQCRFS1P1P0C7P4 283 aa19.36■□□□□ 0.69
COL4A3BP-203ENST00000380494 INSRP06213 1382 aa19.36■□□□□ 0.69
COL4A3BP-203ENST00000380494 FERMT2Q96AC1 680 aa19.36■□□□□ 0.69
COL4A3BP-203ENST00000380494 DZIP1Q86YF9 867 aaKnown RBP19.35■□□□□ 0.69
COL4A3BP-203ENST00000380494 CCDC85AQ96PX6 553 aaPredicted RBP19.35■□□□□ 0.69
COL4A3BP-203ENST00000380494 PAIP2Q9BPZ3 127 aaKnown RBP19.35■□□□□ 0.69
COL4A3BP-203ENST00000380494 ZNF652Q9Y2D9 606 aa19.35■□□□□ 0.69
COL4A3BP-203ENST00000380494 FAM69CQ0P6D2 419 aa19.35■□□□□ 0.69
COL4A3BP-203ENST00000380494 RTN1Q16799 776 aa19.35■□□□□ 0.69
COL4A3BP-203ENST00000380494 SLF2Q8IX21 1173 aa19.35■□□□□ 0.69
COL4A3BP-203ENST00000380494 LUC7L2Q9Y383 392 aaKnown RBP19.35■□□□□ 0.69
COL4A3BP-203ENST00000380494 MARCKSP29966 332 aaPredicted RBP19.35■□□□□ 0.69
COL4A3BP-203ENST00000380494 MAP3K9P80192 1104 aa19.35■□□□□ 0.69
COL4A3BP-203ENST00000380494 SARNPP82979 210 aaKnown RBP19.35■□□□□ 0.69
COL4A3BP-203ENST00000380494 ZMYM4Q5VZL5 1548 aa19.35■□□□□ 0.69
COL4A3BP-203ENST00000380494 GOLGA6CA6NDK9 693 aa19.35■□□□□ 0.69
COL4A3BP-203ENST00000380494 GOLGA6DP0CG33 693 aa19.35■□□□□ 0.69
COL4A3BP-203ENST00000380494 RBM28Q9NW13 759 aaKnown RBP19.35■□□□□ 0.69
COL4A3BP-203ENST00000380494 GOLGA6AQ9NYA3 693 aa19.35■□□□□ 0.69
COL4A3BP-203ENST00000380494 ALDH1L1O75891 902 aa19.34■□□□□ 0.69
COL4A3BP-203ENST00000380494 HAND2P61296 217 aa19.34■□□□□ 0.69
COL4A3BP-203ENST00000380494 SEPT6Q14141 434 aa19.34■□□□□ 0.69
COL4A3BP-203ENST00000380494 ZSCAN29Q8IWY8 852 aaPredicted RBP19.34■□□□□ 0.69
COL4A3BP-203ENST00000380494 CREB3L3Q68CJ9 461 aa19.34■□□□□ 0.69
COL4A3BP-203ENST00000380494 ARHGEF11O15085 1522 aa19.34■□□□□ 0.69
COL4A3BP-203ENST00000380494 KIAA0586Q9BVV6 1533 aa19.34■□□□□ 0.69
COL4A3BP-203ENST00000380494 CCDC160A6NGH7 325 aa19.34■□□□□ 0.69
COL4A3BP-203ENST00000380494 NDUFAB1O14561 156 aa19.34■□□□□ 0.69
COL4A3BP-203ENST00000380494 TBCAO75347 108 aaKnown RBP19.34■□□□□ 0.69
COL4A3BP-203ENST00000380494 GIGYF1O75420 1035 aaPredicted RBP19.34■□□□□ 0.69
COL4A3BP-203ENST00000380494 KRT13P13646 458 aa19.34■□□□□ 0.69
COL4A3BP-203ENST00000380494 GBP1P32455 592 aa19.34■□□□□ 0.69
COL4A3BP-203ENST00000380494 PPP1R2P41236 205 aa19.34■□□□□ 0.69
COL4A3BP-203ENST00000380494 RBM5P52756 815 aaKnown RBP eCLIP19.34■□□□□ 0.69
COL4A3BP-203ENST00000380494 CEP85Q6P2H3 762 aa19.34■□□□□ 0.69
COL4A3BP-203ENST00000380494 FMNL3Q8IVF7 1028 aa19.34■□□□□ 0.69
COL4A3BP-203ENST00000380494 KRI1Q8N9T8 703 aaKnown RBP19.34■□□□□ 0.69
COL4A3BP-203ENST00000380494 CHMLP26374 656 aa19.34■□□□□ 0.69
COL4A3BP-203ENST00000380494 OSCARQ8IYS5 282 aa19.34■□□□□ 0.69
COL4A3BP-203ENST00000380494 ERMNQ8TAM6 284 aa19.34■□□□□ 0.69
COL4A3BP-203ENST00000380494 HMGXB3Q12766 1538 aa19.33■□□□□ 0.69
COL4A3BP-203ENST00000380494 CLNS1AP54105 237 aaKnown RBP19.33■□□□□ 0.69
COL4A3BP-203ENST00000380494 NMIQ13287 307 aaPredicted RBP19.33■□□□□ 0.69
COL4A3BP-203ENST00000380494 IFT81Q8WYA0 676 aa19.33■□□□□ 0.69
COL4A3BP-203ENST00000380494 HSP90AA4PQ58FG1 418 aa19.33■□□□□ 0.69
COL4A3BP-203ENST00000380494 CROCCP2Q86T23 111 aa19.33■□□□□ 0.69
COL4A3BP-203ENST00000380494 TRIM75PA6NK02 468 aa19.33■□□□□ 0.68
COL4A3BP-203ENST00000380494 OAS2P29728 719 aaKnown RBP19.33■□□□□ 0.68
COL4A3BP-203ENST00000380494 CYP26C1Q6V0L0 522 aa19.33■□□□□ 0.68
COL4A3BP-203ENST00000380494 NEK11Q8NG66 645 aa19.33■□□□□ 0.68
COL4A3BP-203ENST00000380494 ZBTB16Q05516 673 aa19.32■□□□□ 0.68
COL4A3BP-203ENST00000380494 DHX58Q96C10 678 aa19.32■□□□□ 0.68
COL4A3BP-203ENST00000380494 CWC25Q9NXE8 425 aaPredicted RBP19.32■□□□□ 0.68
COL4A3BP-203ENST00000380494 CCDC122Q5T0U0 273 aa19.32■□□□□ 0.68
COL4A3BP-203ENST00000380494 SPTY2D1Q68D10 685 aaPredicted RBP19.32■□□□□ 0.68
COL4A3BP-203ENST00000380494 CCDC26Q8TAB7 109 aa19.32■□□□□ 0.68
COL4A3BP-203ENST00000380494 BCL2L12Q9HB09 334 aa19.32■□□□□ 0.68
COL4A3BP-203ENST00000380494 PTPDC1A2A3K4 754 aa19.32■□□□□ 0.68
COL4A3BP-203ENST00000380494 USP37Q86T82 979 aa19.32■□□□□ 0.68
COL4A3BP-203ENST00000380494 UTP14CQ5TAP6 766 aaKnown RBP19.32■□□□□ 0.68
COL4A3BP-203ENST00000380494 CEP128Q6ZU80 1094 aa19.32■□□□□ 0.68
COL4A3BP-203ENST00000380494 NOL3O60936 208 aaKnown RBP19.31■□□□□ 0.68
COL4A3BP-203ENST00000380494 CACNA2D3Q8IZS8 1091 aa19.31■□□□□ 0.68
COL4A3BP-203ENST00000380494 JAKMIP2Q96AA8 810 aa19.31■□□□□ 0.68
COL4A3BP-203ENST00000380494 LMBRD1Q9NUN5 540 aa19.31■□□□□ 0.68
COL4A3BP-203ENST00000380494 PI4KAP2A4QPH2 592 aa19.31■□□□□ 0.68
COL4A3BP-203ENST00000380494 SYCP3Q8IZU3 236 aa19.31■□□□□ 0.68
COL4A3BP-203ENST00000380494 PI4KAP1Q8N8J0 262 aa19.31■□□□□ 0.68
COL4A3BP-203ENST00000380494 RTL9Q8NET4 1388 aa19.31■□□□□ 0.68
COL4A3BP-203ENST00000380494 PROSER2Q86WR7 435 aaPredicted RBP19.31■□□□□ 0.68
COL4A3BP-203ENST00000380494 RNF123Q5XPI4 1314 aa19.31■□□□□ 0.68
COL4A3BP-203ENST00000380494 THOC2Q8NI27 1593 aaKnown RBP19.31■□□□□ 0.68
COL4A3BP-203ENST00000380494 BUB1BO60566 1050 aaPredicted RBP19.31■□□□□ 0.68
COL4A3BP-203ENST00000380494 INTS8Q75QN2 995 aaKnown RBP19.31■□□□□ 0.68
COL4A3BP-203ENST00000380494 C16orf71Q8IYS4 520 aaPredicted RBP19.31■□□□□ 0.68
COL4A3BP-203ENST00000380494 NAP1L3Q99457 506 aaPredicted RBP19.31■□□□□ 0.68
COL4A3BP-203ENST00000380494 MMRN2Q9H8L6 949 aa19.31■□□□□ 0.68
COL4A3BP-203ENST00000380494 CBX8Q9HC52 389 aa19.31■□□□□ 0.68
COL4A3BP-203ENST00000380494 AOX1Q06278 1338 aa19.31■□□□□ 0.68
COL4A3BP-203ENST00000380494 MRC2Q9UBG0 1479 aa19.31■□□□□ 0.68
COL4A3BP-203ENST00000380494 CARD6Q9BX69 1037 aa19.31■□□□□ 0.68
COL4A3BP-203ENST00000380494 WDHD1O75717 1129 aaPredicted RBP19.3■□□□□ 0.68
COL4A3BP-203ENST00000380494 CALM1P0DP23 149 aa19.3■□□□□ 0.68
COL4A3BP-203ENST00000380494 CALM2P0DP24 149 aa19.3■□□□□ 0.68
COL4A3BP-203ENST00000380494 CALM3P0DP25 149 aa19.3■□□□□ 0.68
COL4A3BP-203ENST00000380494 ALDH3A1P30838 453 aa19.3■□□□□ 0.68
COL4A3BP-203ENST00000380494 MEX3CQ5U5Q3 659 aaKnown RBP19.3■□□□□ 0.68
COL4A3BP-203ENST00000380494 GPR161Q8N6U8 529 aaKnown RBP19.3■□□□□ 0.68
COL4A3BP-203ENST00000380494 NESP48681 1621 aa19.3■□□□□ 0.68
COL4A3BP-203ENST00000380494 ADGRF5Q8IZF2 1346 aa19.3■□□□□ 0.68
COL4A3BP-203ENST00000380494 SPATS2Q86XZ4 545 aaKnown RBP19.3■□□□□ 0.68
COL4A3BP-203ENST00000380494 ABCA10Q8WWZ4 1543 aa19.3■□□□□ 0.68
COL4A3BP-203ENST00000380494 GNAQP50148 359 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms