RNA–Protein interactions for RNA: ENST00000377115.4

FOXA2-201, Transcript of forkhead box A2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXA2, Length 2,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-201ENST00000377115 XPO4Q9C0E2 1151 aaKnown RBP26.88■■□□□ 1.89
FOXA2-201ENST00000377115 L2HGDHQ9H9P8 463 aa26.88■■□□□ 1.89
FOXA2-201ENST00000377115 SMC2O95347 1197 aa26.88■■□□□ 1.89
FOXA2-201ENST00000377115 DHX32Q7L7V1 743 aaKnown RBP26.88■■□□□ 1.89
FOXA2-201ENST00000377115 TMC6Q7Z403 805 aa26.88■■□□□ 1.89
FOXA2-201ENST00000377115 ERICH4A6NGS2 130 aa26.87■■□□□ 1.89
FOXA2-201ENST00000377115 NEURL1BA8MQ27 555 aa26.87■■□□□ 1.89
FOXA2-201ENST00000377115 MRPS27Q92552 414 aaKnown RBP26.87■■□□□ 1.89
FOXA2-201ENST00000377115 A0A0G2JLW4 131 aa26.87■■□□□ 1.89
FOXA2-201ENST00000377115 DBNDD2Q9BQY9 259 aa26.87■■□□□ 1.89
FOXA2-201ENST00000377115 IFNKQ9P0W0 207 aa26.87■■□□□ 1.89
FOXA2-201ENST00000377115 IMPACTQ9P2X3 320 aa26.87■■□□□ 1.89
FOXA2-201ENST00000377115 CCDC9Q9Y3X0 531 aaKnown RBP26.87■■□□□ 1.89
FOXA2-201ENST00000377115 ZBTB22O15209 634 aa26.86■■□□□ 1.89
FOXA2-201ENST00000377115 H2AFXP16104 143 aaPredicted RBP26.86■■□□□ 1.89
FOXA2-201ENST00000377115 CEBPAP49715 358 aaPredicted RBP26.86■■□□□ 1.89
FOXA2-201ENST00000377115 SALL1Q9NSC2 1324 aa26.86■■□□□ 1.89
FOXA2-201ENST00000377115 NDUFA8P51970 172 aa26.86■■□□□ 1.89
FOXA2-201ENST00000377115 GCKRQ14397 625 aa26.86■■□□□ 1.89
FOXA2-201ENST00000377115 MYL6BP14649 208 aa26.85■■□□□ 1.89
FOXA2-201ENST00000377115 NFAT5O94916 1531 aa26.85■■□□□ 1.89
FOXA2-201ENST00000377115 ATL3Q6DD88 541 aa26.85■■□□□ 1.89
FOXA2-201ENST00000377115 MYD88Q99836 296 aa26.85■■□□□ 1.89
FOXA2-201ENST00000377115 PTPN12Q05209 780 aaKnown RBP26.84■■□□□ 1.89
FOXA2-201ENST00000377115 CCDC93Q567U6 631 aa26.84■■□□□ 1.89
FOXA2-201ENST00000377115 CHST3Q7LGC8 479 aa26.84■■□□□ 1.89
FOXA2-201ENST00000377115 COPRSQ9NQ92 184 aa26.84■■□□□ 1.89
FOXA2-201ENST00000377115 ABCC6O95255 1503 aa26.84■■□□□ 1.89
FOXA2-201ENST00000377115 HMGB1P09429 215 aaKnown RBP26.84■■□□□ 1.89
FOXA2-201ENST00000377115 CCDC150Q8NCX0 1101 aa26.84■■□□□ 1.89
FOXA2-201ENST00000377115 FMNL2Q96PY5 1086 aa26.84■■□□□ 1.89
FOXA2-201ENST00000377115 CCDC66A2RUB6 948 aa26.83■■□□□ 1.89
FOXA2-201ENST00000377115 SFPQP23246 707 aaKnown RBP eCLIP26.83■■□□□ 1.89
FOXA2-201ENST00000377115 RFX5P48382 616 aaPredicted RBP26.83■■□□□ 1.89
FOXA2-201ENST00000377115 CLCN6P51797 869 aa26.83■■□□□ 1.89
FOXA2-201ENST00000377115 HAUS7Q99871 368 aa26.83■■□□□ 1.89
FOXA2-201ENST00000377115 KIAA1468Q9P260 1216 aa26.83■■□□□ 1.89
FOXA2-201ENST00000377115 RFX7Q2KHR2 1363 aa26.83■■□□□ 1.89
FOXA2-201ENST00000377115 BIN1O00499 593 aa26.82■■□□□ 1.88
FOXA2-201ENST00000377115 KCNA6P17658 529 aa26.82■■□□□ 1.88
FOXA2-201ENST00000377115 EXOSC10Q01780 885 aaKnown RBP26.82■■□□□ 1.88
FOXA2-201ENST00000377115 NEXNQ0ZGT2 675 aa26.82■■□□□ 1.88
FOXA2-201ENST00000377115 AMOTQ4VCS5 1084 aa26.82■■□□□ 1.88
FOXA2-201ENST00000377115 NEDD4P46934 1319 aa26.82■■□□□ 1.88
FOXA2-201ENST00000377115 FHOD1Q9Y613 1164 aa26.82■■□□□ 1.88
FOXA2-201ENST00000377115 CARMIL3Q8ND23 1372 aa26.82■■□□□ 1.88
FOXA2-201ENST00000377115 PSDA5PKW4 1024 aaPredicted RBP26.81■■□□□ 1.88
FOXA2-201ENST00000377115 ADALQ6DHV7 355 aa26.81■■□□□ 1.88
FOXA2-201ENST00000377115 OTUD7BQ6GQQ9 843 aa26.81■■□□□ 1.88
FOXA2-201ENST00000377115 PDIA3P30101 505 aaKnown RBP26.81■■□□□ 1.88
FOXA2-201ENST00000377115 BMS1Q14692 1282 aaKnown RBP26.81■■□□□ 1.88
FOXA2-201ENST00000377115 AGXT2Q9BYV1 514 aa26.81■■□□□ 1.88
FOXA2-201ENST00000377115 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.81■■□□□ 1.88
FOXA2-201ENST00000377115 ZRSR1Q15695 479 aaKnown RBP26.8■■□□□ 1.88
FOXA2-201ENST00000377115 GORABQ5T7V8 394 aa26.8■■□□□ 1.88
FOXA2-201ENST00000377115 XAGE3Q8WTP9 111 aa26.8■■□□□ 1.88
FOXA2-201ENST00000377115 CLIC4Q9Y696 253 aa26.8■■□□□ 1.88
FOXA2-201ENST00000377115 SH3TC1Q8TE82 1336 aa26.8■■□□□ 1.88
FOXA2-201ENST00000377115 FDPSP14324 419 aaKnown RBP26.8■■□□□ 1.88
FOXA2-201ENST00000377115 PLPPR3Q6T4P5 718 aa26.8■■□□□ 1.88
FOXA2-201ENST00000377115 RTEL1Q9NZ71 1219 aa26.8■■□□□ 1.88
FOXA2-201ENST00000377115 ARHGAP29Q52LW3 1261 aa26.79■■□□□ 1.88
FOXA2-201ENST00000377115 KBTBD3Q8NAB2 608 aa26.79■■□□□ 1.88
FOXA2-201ENST00000377115 LINC00301Q8NCQ3 95 aa26.79■■□□□ 1.88
FOXA2-201ENST00000377115 E7EWF7 191 aa26.79■■□□□ 1.88
FOXA2-201ENST00000377115 BPIFA3Q9BQP9 254 aa26.79■■□□□ 1.88
FOXA2-201ENST00000377115 NOL10Q9BSC4 688 aaKnown RBP26.79■■□□□ 1.88
FOXA2-201ENST00000377115 TMEM51Q9NW97 253 aa26.79■■□□□ 1.88
FOXA2-201ENST00000377115 SLC39A6Q13433 755 aa26.78■■□□□ 1.88
FOXA2-201ENST00000377115 PHF8Q9UPP1 1060 aa26.78■■□□□ 1.88
FOXA2-201ENST00000377115 A0A1W2PQ27 194 aa26.78■■□□□ 1.88
FOXA2-201ENST00000377115 A0A1W2PQ64 194 aa26.78■■□□□ 1.88
FOXA2-201ENST00000377115 A0A1W2PQD8 194 aa26.78■■□□□ 1.88
FOXA2-201ENST00000377115 NCAPHQ15003 741 aa26.78■■□□□ 1.88
FOXA2-201ENST00000377115 STK38Q15208 465 aa26.78■■□□□ 1.88
FOXA2-201ENST00000377115 SF3A1Q15459 793 aaKnown RBP26.78■■□□□ 1.88
FOXA2-201ENST00000377115 COPS6Q7L5N1 327 aa26.78■■□□□ 1.88
FOXA2-201ENST00000377115 POLR3DP05423 398 aaPredicted RBP26.77■■□□□ 1.88
FOXA2-201ENST00000377115 HOMER1Q86YM7 354 aa26.77■■□□□ 1.88
FOXA2-201ENST00000377115 METTL22Q9BUU2 404 aaPredicted RBP26.77■■□□□ 1.88
FOXA2-201ENST00000377115 PNMA6AP0CW24 399 aaPredicted RBP26.77■■□□□ 1.88
FOXA2-201ENST00000377115 OVOS2A0A0G2JMS6 1433 aa26.76■■□□□ 1.87
FOXA2-201ENST00000377115 GOLIM4O00461 696 aa26.76■■□□□ 1.87
FOXA2-201ENST00000377115 BBXQ8WY36 941 aaPredicted RBP26.76■■□□□ 1.87
FOXA2-201ENST00000377115 DNAI1Q9UI46 699 aa26.76■■□□□ 1.87
FOXA2-201ENST00000377115 LMOD1P29536 600 aaPredicted RBP26.76■■□□□ 1.87
FOXA2-201ENST00000377115 GPHNQ9NQX3 736 aaPredicted RBP26.76■■□□□ 1.87
FOXA2-201ENST00000377115 SLC3A2P08195 630 aaKnown RBP26.75■■□□□ 1.87
FOXA2-201ENST00000377115 PLA2G4AP47712 749 aa26.75■■□□□ 1.87
FOXA2-201ENST00000377115 KCNJ6P48051 423 aa26.75■■□□□ 1.87
FOXA2-201ENST00000377115 PIP4K2AP48426 406 aaPredicted RBP26.75■■□□□ 1.87
FOXA2-201ENST00000377115 ISM2Q6H9L7 571 aa26.75■■□□□ 1.87
FOXA2-201ENST00000377115 UBE3BQ7Z3V4 1068 aa26.75■■□□□ 1.87
FOXA2-201ENST00000377115 GTF2E1P29083 439 aaPredicted RBP26.75■■□□□ 1.87
FOXA2-201ENST00000377115 ZNF274Q96GC6 653 aaPredicted RBP26.75■■□□□ 1.87
FOXA2-201ENST00000377115 TIGD1Q96MW7 591 aa26.75■■□□□ 1.87
FOXA2-201ENST00000377115 DSCC1Q9BVC3 393 aa26.75■■□□□ 1.87
FOXA2-201ENST00000377115 ATP1A3P13637 1013 aa26.74■■□□□ 1.87
FOXA2-201ENST00000377115 NLRP12P59046 1061 aa26.74■■□□□ 1.87
FOXA2-201ENST00000377115 ETF1P62495 437 aaKnown RBP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms