RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 ERO1AQ96HE7 468 aa11.12□□□□□ -0.63
SPEN-201ENST00000375759 ESYT1Q9BSJ8 1104 aa11.12□□□□□ -0.63
SPEN-201ENST00000375759 CRNKL1Q9BZJ0 848 aaKnown RBP11.12□□□□□ -0.63
SPEN-201ENST00000375759 ASXL1Q8IXJ9 1541 aa11.12□□□□□ -0.63
SPEN-201ENST00000375759 ZNF569Q5MCW4 686 aa11.12□□□□□ -0.63
SPEN-201ENST00000375759 INTS4Q96HW7 963 aaKnown RBP11.12□□□□□ -0.63
SPEN-201ENST00000375759 IGHDP01880 384 aa11.12□□□□□ -0.63
SPEN-201ENST00000375759 KRBA2Q6ZNG9 492 aa11.12□□□□□ -0.63
SPEN-201ENST00000375759 NPHP3Q7Z494 1330 aa11.12□□□□□ -0.63
SPEN-201ENST00000375759 MMRN2Q9H8L6 949 aa11.12□□□□□ -0.63
SPEN-201ENST00000375759 ASIC1P78348 528 aa11.12□□□□□ -0.63
SPEN-201ENST00000375759 CCDC26Q8TAB7 109 aa11.12□□□□□ -0.63
SPEN-201ENST00000375759 MTUS1Q9ULD2 1270 aa11.12□□□□□ -0.63
SPEN-201ENST00000375759 CALML3P27482 149 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 INTS8Q75QN2 995 aaKnown RBP11.11□□□□□ -0.63
SPEN-201ENST00000375759 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.11□□□□□ -0.63
SPEN-201ENST00000375759 IFT81Q8WYA0 676 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 GBP1P32455 592 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 ARL1P40616 181 aaPredicted RBP11.11□□□□□ -0.63
SPEN-201ENST00000375759 PHF23Q9BUL5 403 aaPredicted RBP11.11□□□□□ -0.63
SPEN-201ENST00000375759 IMPG2Q9BZV3 1241 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 LZTFL1Q9NQ48 299 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 MAP3K1Q13233 1512 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 PRG4Q92954 1404 aaPredicted RBP11.11□□□□□ -0.63
SPEN-201ENST00000375759 ITSN2Q9NZM3 1697 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 GSTO1P78417 241 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 BRF1Q92994 677 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 TPD52P55327 224 aaPredicted RBP11.11□□□□□ -0.63
SPEN-201ENST00000375759 MCMDC2Q4G0Z9 681 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 MIPOL1Q8TD10 442 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 HSP90AA4PQ58FG1 418 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 LUC7L2Q9Y383 392 aaKnown RBP11.11□□□□□ -0.63
SPEN-201ENST00000375759 SCAF11Q99590 1463 aaKnown RBP11.11□□□□□ -0.63
SPEN-201ENST00000375759 CFAP157Q5JU67 520 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 LMNTD2Q8IXW0 634 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 NECAB1Q8N987 351 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 NKIRAS1Q9NYS0 192 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 UQCRFS1P1P0C7P4 283 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 PPM1FP49593 454 aaPredicted RBP11.11□□□□□ -0.63
SPEN-201ENST00000375759 ANKLE2Q86XL3 938 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 SMC1BQ8NDV3 1235 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 SEC62Q99442 399 aaKnown RBP11.11□□□□□ -0.63
SPEN-201ENST00000375759 VAT1LQ9HCJ6 419 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 RHOXF2BP0C7M4 288 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 PPP1R7Q15435 360 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 RHOXF2Q9BQY4 288 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 ODF2LQ9ULJ1 636 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 MRPS9P82933 396 aaKnown RBP11.11□□□□□ -0.63
SPEN-201ENST00000375759 Q6ZUG5 572 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 BRAPQ7Z569 592 aa11.11□□□□□ -0.63
SPEN-201ENST00000375759 GPR161Q8N6U8 529 aaKnown RBP11.11□□□□□ -0.63
SPEN-201ENST00000375759 NDC80O14777 642 aa11.1□□□□□ -0.63
SPEN-201ENST00000375759 GMNNO75496 209 aa11.1□□□□□ -0.63
SPEN-201ENST00000375759 CALCOCO2Q13137 446 aa11.1□□□□□ -0.63
SPEN-201ENST00000375759 TEX13AQ9BXU3 409 aaPredicted RBP11.1□□□□□ -0.63
SPEN-201ENST00000375759 VCX3BQ9H321 246 aa11.1□□□□□ -0.63
SPEN-201ENST00000375759 PPP2R3AQ06190 1150 aa11.1□□□□□ -0.63
SPEN-201ENST00000375759 SMC5Q8IY18 1101 aa11.1□□□□□ -0.63
SPEN-201ENST00000375759 EIF2AK4Q9P2K8 1649 aaKnown RBP11.1□□□□□ -0.63
SPEN-201ENST00000375759 MARCKSP29966 332 aaPredicted RBP11.1□□□□□ -0.63
SPEN-201ENST00000375759 NUTM2AQ8IVF1 878 aaPredicted RBP11.1□□□□□ -0.63
SPEN-201ENST00000375759 TRIM75PA6NK02 468 aa11.1□□□□□ -0.63
SPEN-201ENST00000375759 MSANTD4Q8NCY6 345 aa11.1□□□□□ -0.63
SPEN-201ENST00000375759 KCNK9Q9NPC2 374 aa11.1□□□□□ -0.63
SPEN-201ENST00000375759 MRVI1Q9Y6F6 885 aa11.1□□□□□ -0.63
SPEN-201ENST00000375759 PHACTR2O75167 634 aa11.1□□□□□ -0.63
SPEN-201ENST00000375759 SYT10Q6XYQ8 523 aa11.1□□□□□ -0.63
SPEN-201ENST00000375759 BAG1Q99933 345 aaPredicted RBP11.1□□□□□ -0.63
SPEN-201ENST00000375759 UBLCP1Q8WVY7 318 aaPredicted RBP11.1□□□□□ -0.63
SPEN-201ENST00000375759 CLGNO14967 610 aa11.1□□□□□ -0.63
SPEN-201ENST00000375759 TSPY3P0CV98 308 aa11.1□□□□□ -0.63
SPEN-201ENST00000375759 TSPY8P0CW00 308 aa11.1□□□□□ -0.63
SPEN-201ENST00000375759 LDHAL6AQ6ZMR3 332 aa11.1□□□□□ -0.63
SPEN-201ENST00000375759 IFNKQ9P0W0 207 aa11.1□□□□□ -0.63
SPEN-201ENST00000375759 POGZQ7Z3K3 1410 aa11.1□□□□□ -0.63
SPEN-201ENST00000375759 EEF2P13639 858 aaKnown RBP11.1□□□□□ -0.63
SPEN-201ENST00000375759 ATP6V0A2Q9Y487 856 aa11.1□□□□□ -0.63
SPEN-201ENST00000375759 RBM8AQ9Y5S9 174 aaKnown RBP11.1□□□□□ -0.63
SPEN-201ENST00000375759 ERCC6LQ2NKX8 1250 aa11.09□□□□□ -0.63
SPEN-201ENST00000375759 CHMP4BP1P59074 171 aa11.09□□□□□ -0.63
SPEN-201ENST00000375759 TRIM14Q14142 442 aa11.09□□□□□ -0.63
SPEN-201ENST00000375759 IQGAP2Q13576 1575 aa11.09□□□□□ -0.63
SPEN-201ENST00000375759 AKR1B15C9JRZ8 316 aaPredicted RBP11.09□□□□□ -0.63
SPEN-201ENST00000375759 PDE1AP54750 535 aa11.09□□□□□ -0.63
SPEN-201ENST00000375759 ARID5AQ03989 594 aa11.09□□□□□ -0.63
SPEN-201ENST00000375759 ZGPATQ8N5A5 531 aaKnown RBP11.09□□□□□ -0.63
SPEN-201ENST00000375759 RTL9Q8NET4 1388 aa11.09□□□□□ -0.63
SPEN-201ENST00000375759 ARHGAP25P42331 645 aa11.09□□□□□ -0.63
SPEN-201ENST00000375759 UBE3BQ7Z3V4 1068 aa11.09□□□□□ -0.63
SPEN-201ENST00000375759 TSHZ3Q63HK5 1081 aa11.09□□□□□ -0.63
SPEN-201ENST00000375759 CABP5Q9NP86 173 aa11.09□□□□□ -0.63
SPEN-201ENST00000375759 STX8Q9UNK0 236 aa11.09□□□□□ -0.63
SPEN-201ENST00000375759 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.09□□□□□ -0.638e-7■■□□□ 13.5
SPEN-201ENST00000375759 EVCP57679 992 aa11.09□□□□□ -0.63
SPEN-201ENST00000375759 RHPN1Q8TCX5 695 aa11.09□□□□□ -0.63
SPEN-201ENST00000375759 GTF3C6Q969F1 213 aa11.09□□□□□ -0.63
SPEN-201ENST00000375759 HDAC9Q9UKV0 1011 aa11.09□□□□□ -0.63
SPEN-201ENST00000375759 PCK1P35558 622 aa11.09□□□□□ -0.63
SPEN-201ENST00000375759 GABPB1Q06547 395 aaPredicted RBP11.09□□□□□ -0.63
SPEN-201ENST00000375759 FYB2Q5VWT5 728 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms