RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 ZSWIM6Q9HCJ5 1215 aa19.29■□□□□ 0.68
VARS-215ENST00000375663 TCEAL9Q9UHQ7 104 aa19.29■□□□□ 0.68
VARS-215ENST00000375663 MYO6Q9UM54 1294 aa19.29■□□□□ 0.68
VARS-215ENST00000375663 NDUFB9Q9Y6M9 179 aa19.29■□□□□ 0.68
VARS-215ENST00000375663 TPCN1Q9ULQ1 816 aa19.29■□□□□ 0.68
VARS-215ENST00000375663 PLEKHG3A1L390 1219 aa19.28■□□□□ 0.68
VARS-215ENST00000375663 EIF4A1P60842 406 aaKnown RBP19.28■□□□□ 0.68
VARS-215ENST00000375663 IKQ13123 557 aaPredicted RBP19.28■□□□□ 0.68
VARS-215ENST00000375663 SAMD1Q6SPF0 538 aaPredicted RBP19.28■□□□□ 0.68
VARS-215ENST00000375663 CCDC43Q96MW1 224 aaKnown RBP19.28■□□□□ 0.68
VARS-215ENST00000375663 WTAPQ15007 396 aa19.28■□□□□ 0.68
VARS-215ENST00000375663 BMP2KQ9NSY1 1161 aaPredicted RBP19.28■□□□□ 0.68
VARS-215ENST00000375663 CLASP1Q7Z460 1538 aa19.28■□□□□ 0.68
VARS-215ENST00000375663 MYL5Q02045 173 aa19.28■□□□□ 0.68
VARS-215ENST00000375663 FKBP15Q5T1M5 1219 aa19.28■□□□□ 0.68
VARS-215ENST00000375663 GCP02774 474 aa19.27■□□□□ 0.68
VARS-215ENST00000375663 EDC3Q96F86 508 aaKnown RBP19.27■□□□□ 0.68
VARS-215ENST00000375663 PTCH1Q13635 1447 aa19.27■□□□□ 0.68
VARS-215ENST00000375663 ARHGEF10O15013 1369 aa19.27■□□□□ 0.68
VARS-215ENST00000375663 KIF20AO95235 890 aa19.27■□□□□ 0.68
VARS-215ENST00000375663 SMARCC1Q92922 1105 aaPredicted RBP19.27■□□□□ 0.68
VARS-215ENST00000375663 AATKQ6ZMQ8 1374 aa19.27■□□□□ 0.68
VARS-215ENST00000375663 ATP2B2Q01814 1243 aa19.27■□□□□ 0.68
VARS-215ENST00000375663 OTUD7BQ6GQQ9 843 aa19.27■□□□□ 0.68
VARS-215ENST00000375663 LSG1Q9H089 658 aaKnown RBP19.27■□□□□ 0.68
VARS-215ENST00000375663 RNF216Q9NWF9 866 aaPredicted RBP19.27■□□□□ 0.68
VARS-215ENST00000375663 IQGAP3Q86VI3 1631 aa19.27■□□□□ 0.67
VARS-215ENST00000375663 NR1I2O75469 434 aa19.27■□□□□ 0.67
VARS-215ENST00000375663 CCDC175P0C221 793 aa19.26■□□□□ 0.67
VARS-215ENST00000375663 RTN1Q16799 776 aa19.26■□□□□ 0.67
VARS-215ENST00000375663 GTF3C6Q969F1 213 aa19.26■□□□□ 0.67
VARS-215ENST00000375663 HELLSQ9NRZ9 838 aa19.26■□□□□ 0.67
VARS-215ENST00000375663 CCDC194A0A1B0GVG4 234 aa19.26■□□□□ 0.67
VARS-215ENST00000375663 RXRAP19793 462 aa19.26■□□□□ 0.67
VARS-215ENST00000375663 ELF2Q15723 593 aa19.26■□□□□ 0.67
VARS-215ENST00000375663 ADCK5Q3MIX3 580 aa19.26■□□□□ 0.67
VARS-215ENST00000375663 EAF2Q96CJ1 260 aaPredicted RBP19.26■□□□□ 0.67
VARS-215ENST00000375663 PYCARDQ9ULZ3 195 aa19.26■□□□□ 0.67
VARS-215ENST00000375663 KARSQ15046 597 aaKnown RBP19.25■□□□□ 0.67
VARS-215ENST00000375663 CAVIN4Q5BKX8 364 aa19.25■□□□□ 0.67
VARS-215ENST00000375663 A0A0D9SFI3 127 aa19.25■□□□□ 0.67
VARS-215ENST00000375663 UQCRFS1P1P0C7P4 283 aa19.25■□□□□ 0.67
VARS-215ENST00000375663 USO1O60763 962 aaKnown RBP19.25■□□□□ 0.67
VARS-215ENST00000375663 KCNA6P17658 529 aa19.25■□□□□ 0.67
VARS-215ENST00000375663 ODF2Q5BJF6 829 aa19.25■□□□□ 0.67
VARS-215ENST00000375663 NAA16Q6N069 864 aaPredicted RBP19.25■□□□□ 0.67
VARS-215ENST00000375663 KIF2CQ99661 725 aa19.25■□□□□ 0.67
VARS-215ENST00000375663 PAFAH1B1P43034 410 aa19.24■□□□□ 0.67
VARS-215ENST00000375663 KBTBD3Q8NAB2 608 aa19.24■□□□□ 0.67
VARS-215ENST00000375663 GOLGA1Q92805 767 aa19.24■□□□□ 0.67
VARS-215ENST00000375663 CTAGE15A4D2H0 777 aa19.24■□□□□ 0.67
VARS-215ENST00000375663 ERLIN2O94905 339 aa19.24■□□□□ 0.67
VARS-215ENST00000375663 CTAGE8P0CG41 777 aa19.24■□□□□ 0.67
VARS-215ENST00000375663 UBA7P41226 1012 aa19.24■□□□□ 0.67
VARS-215ENST00000375663 MTIF2P46199 727 aaKnown RBP19.24■□□□□ 0.67
VARS-215ENST00000375663 CTAGE6Q86UF2 777 aa19.24■□□□□ 0.67
VARS-215ENST00000375663 CTAGE4Q8IX94 777 aa19.24■□□□□ 0.67
VARS-215ENST00000375663 TAF4BQ92750 862 aa19.24■□□□□ 0.67
VARS-215ENST00000375663 CTAGE1Q96RT6 745 aa19.24■□□□□ 0.67
VARS-215ENST00000375663 METTL22Q9BUU2 404 aaPredicted RBP19.24■□□□□ 0.67
VARS-215ENST00000375663 KRT23Q9C075 422 aa19.24■□□□□ 0.67
VARS-215ENST00000375663 ZNF790Q6PG37 636 aa19.24■□□□□ 0.67
VARS-215ENST00000375663 CACNA2D4Q7Z3S7 1137 aa19.24■□□□□ 0.67
VARS-215ENST00000375663 SHTN1A0MZ66 631 aa19.23■□□□□ 0.67
VARS-215ENST00000375663 USP8P40818 1118 aa19.23■□□□□ 0.67
VARS-215ENST00000375663 ANO1Q5XXA6 986 aa19.23■□□□□ 0.67
VARS-215ENST00000375663 MKNK2Q9HBH9 465 aa19.23■□□□□ 0.67
VARS-215ENST00000375663 LZTFL1Q9NQ48 299 aa19.23■□□□□ 0.67
VARS-215ENST00000375663 ELP1O95163 1332 aa19.23■□□□□ 0.67
VARS-215ENST00000375663 BEND3Q5T5X7 828 aa19.23■□□□□ 0.67
VARS-215ENST00000375663 DHX58Q96C10 678 aa19.23■□□□□ 0.67
VARS-215ENST00000375663 STX17P56962 302 aa19.23■□□□□ 0.67
VARS-215ENST00000375663 RRAGBQ5VZM2 374 aa19.23■□□□□ 0.67
VARS-215ENST00000375663 TMTC2Q8N394 836 aa19.23■□□□□ 0.67
VARS-215ENST00000375663 TBX22Q9Y458 520 aa19.23■□□□□ 0.67
VARS-215ENST00000375663 KCNQ3O43525 872 aa19.22■□□□□ 0.67
VARS-215ENST00000375663 DNA2P51530 1060 aa19.22■□□□□ 0.67
VARS-215ENST00000375663 EVCP57679 992 aa19.22■□□□□ 0.67
VARS-215ENST00000375663 FANCCQ00597 558 aa19.22■□□□□ 0.67
VARS-215ENST00000375663 BICDL1Q6ZP65 573 aa19.22■□□□□ 0.67
VARS-215ENST00000375663 CNNM2Q9H8M5 875 aa19.22■□□□□ 0.67
VARS-215ENST00000375663 NBPF6Q5VWK0 638 aa19.22■□□□□ 0.67
VARS-215ENST00000375663 NBPF4Q96M43 638 aa19.22■□□□□ 0.67
VARS-215ENST00000375663 ADCY10Q96PN6 1610 aa19.22■□□□□ 0.67
VARS-215ENST00000375663 TRIM75PA6NK02 468 aa19.22■□□□□ 0.67
VARS-215ENST00000375663 SPAG1Q07617 926 aa19.22■□□□□ 0.67
VARS-215ENST00000375663 GCKRQ14397 625 aa19.22■□□□□ 0.67
VARS-215ENST00000375663 ZFP91Q96JP5 570 aaPredicted RBP19.22■□□□□ 0.67
VARS-215ENST00000375663 TEX13AQ9BXU3 409 aaPredicted RBP19.22■□□□□ 0.67
VARS-215ENST00000375663 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.22■□□□□ 0.673e-7■□□□□ 9.6
VARS-215ENST00000375663 A0A1B0GUL7 405 aa19.21■□□□□ 0.67
VARS-215ENST00000375663 CLEC17AQ6ZS10 378 aa19.21■□□□□ 0.67
VARS-215ENST00000375663 BAG1Q99933 345 aaPredicted RBP19.21■□□□□ 0.67
VARS-215ENST00000375663 ZNF202O95125 648 aa19.21■□□□□ 0.67
VARS-215ENST00000375663 CTR9Q6PD62 1173 aa19.21■□□□□ 0.67
VARS-215ENST00000375663 PYM1Q9BRP8 204 aaKnown RBP19.21■□□□□ 0.67
VARS-215ENST00000375663 KIF1BO60333 1816 aa19.21■□□□□ 0.67
VARS-215ENST00000375663 BMP15O95972 392 aa19.21■□□□□ 0.67
VARS-215ENST00000375663 GABPB1Q06547 395 aaPredicted RBP19.21■□□□□ 0.67
VARS-215ENST00000375663 JADE2Q9NQC1 790 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms