RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 RIMBP2O15034 1052 aa12.93□□□□□ -0.34
COL5A1-202ENST00000371820 ATP2B4P23634 1241 aa12.93□□□□□ -0.34
COL5A1-202ENST00000371820 MAP2K2P36507 400 aa12.93□□□□□ -0.34
COL5A1-202ENST00000371820 FAM161AQ3B820 660 aa12.93□□□□□ -0.34
COL5A1-202ENST00000371820 BEND3Q5T5X7 828 aa12.93□□□□□ -0.34
COL5A1-202ENST00000371820 CDC37L1Q7L3B6 337 aa12.93□□□□□ -0.34
COL5A1-202ENST00000371820 GREM2Q9H772 168 aa12.93□□□□□ -0.34
COL5A1-202ENST00000371820 BSDC1Q9NW68 430 aaPredicted RBP12.93□□□□□ -0.34
COL5A1-202ENST00000371820 C9orf78Q9NZ63 289 aaPredicted RBP12.93□□□□□ -0.34
COL5A1-202ENST00000371820 ZBTB12Q9Y330 459 aaPredicted RBP12.93□□□□□ -0.34
COL5A1-202ENST00000371820 SCN9AQ15858 1988 aa12.92□□□□□ -0.34
COL5A1-202ENST00000371820 GRM8O00222 908 aa12.92□□□□□ -0.34
COL5A1-202ENST00000371820 ECE2O60344 883 aa12.92□□□□□ -0.34
COL5A1-202ENST00000371820 AOC2O75106 756 aa12.92□□□□□ -0.34
COL5A1-202ENST00000371820 RPS12P25398 132 aaKnown RBP12.92□□□□□ -0.34
COL5A1-202ENST00000371820 CASP7P55210 303 aa12.92□□□□□ -0.34
COL5A1-202ENST00000371820 ALDH1L2Q3SY69 923 aa12.92□□□□□ -0.34
COL5A1-202ENST00000371820 SLC4A10Q6U841 1118 aa12.92□□□□□ -0.34
COL5A1-202ENST00000371820 MPHOSPH8Q99549 860 aa12.92□□□□□ -0.34
COL5A1-202ENST00000371820 BEGAINQ9BUH8 593 aa12.92□□□□□ -0.34
COL5A1-202ENST00000371820 SRCIN1Q9C0H9 1055 aa12.92□□□□□ -0.34
COL5A1-202ENST00000371820 ZNF408Q9H9D4 720 aa12.92□□□□□ -0.34
COL5A1-202ENST00000371820 ZNF609O15014 1411 aa12.91□□□□□ -0.34
COL5A1-202ENST00000371820 SPEF2Q9C093 1822 aa12.91□□□□□ -0.34
COL5A1-202ENST00000371820 ANKRD18BA2A2Z9 1011 aa12.91□□□□□ -0.34
COL5A1-202ENST00000371820 CSF1RP07333 972 aa12.91□□□□□ -0.34
COL5A1-202ENST00000371820 ITGA6P23229 1130 aa12.91□□□□□ -0.34
COL5A1-202ENST00000371820 SAMD7Q7Z3H4 446 aa12.91□□□□□ -0.34
COL5A1-202ENST00000371820 ANKRD2Q9GZV1 360 aa12.91□□□□□ -0.34
COL5A1-202ENST00000371820 PSME4Q14997 1843 aa12.9□□□□□ -0.34
COL5A1-202ENST00000371820 EGFRP00533 1210 aa12.9□□□□□ -0.34
COL5A1-202ENST00000371820 IFIT5Q13325 482 aaKnown RBP12.9□□□□□ -0.34
COL5A1-202ENST00000371820 DOK7Q18PE1 504 aa12.9□□□□□ -0.34
COL5A1-202ENST00000371820 TBC1D10BQ4KMP7 808 aaPredicted RBP12.9□□□□□ -0.34
COL5A1-202ENST00000371820 MRPL50Q8N5N7 158 aaKnown RBP12.9□□□□□ -0.34
COL5A1-202ENST00000371820 KCNQ5Q9NR82 932 aa12.9□□□□□ -0.34
COL5A1-202ENST00000371820 MINPP1Q9UNW1 487 aa12.9□□□□□ -0.34
COL5A1-202ENST00000371820 LEMD3Q9Y2U8 911 aa12.9□□□□□ -0.34
COL5A1-202ENST00000371820 CHMP3Q9Y3E7 222 aa12.9□□□□□ -0.34
COL5A1-202ENST00000371820 MED23Q9ULK4 1368 aa12.9□□□□□ -0.34
COL5A1-202ENST00000371820 CCT4P50991 539 aaKnown RBP12.89□□□□□ -0.35
COL5A1-202ENST00000371820 BRPF1P55201 1214 aaPredicted RBP12.89□□□□□ -0.35
COL5A1-202ENST00000371820 PODNQ7Z5L7 613 aa12.89□□□□□ -0.35
COL5A1-202ENST00000371820 USP48Q86UV5 1035 aa12.89□□□□□ -0.35
COL5A1-202ENST00000371820 ABHD8Q96I13 439 aa12.89□□□□□ -0.35
COL5A1-202ENST00000371820 CA12O43570 354 aa12.88□□□□□ -0.35
COL5A1-202ENST00000371820 PLIN1O60240 522 aa12.88□□□□□ -0.35
COL5A1-202ENST00000371820 VIL1P09327 827 aaKnown RBP12.88□□□□□ -0.35
COL5A1-202ENST00000371820 DEKP35659 375 aaKnown RBP12.88□□□□□ -0.35
COL5A1-202ENST00000371820 CCDC57Q2TAC2 916 aa12.88□□□□□ -0.35
COL5A1-202ENST00000371820 KIF4BQ2VIQ3 1234 aa12.88□□□□□ -0.35
COL5A1-202ENST00000371820 TAF7LQ5H9L4 462 aa12.88□□□□□ -0.35
COL5A1-202ENST00000371820 DLK2Q6UY11 383 aa12.88□□□□□ -0.35
COL5A1-202ENST00000371820 KRT26Q7Z3Y9 468 aa12.88□□□□□ -0.35
COL5A1-202ENST00000371820 SSH1Q8WYL5 1049 aa12.88□□□□□ -0.35
COL5A1-202ENST00000371820 SMC4Q9NTJ3 1288 aa12.88□□□□□ -0.35
COL5A1-202ENST00000371820 TSKSQ9UJT2 592 aa12.88□□□□□ -0.35
COL5A1-202ENST00000371820 ADM5C9JUS6 153 aa12.87□□□□□ -0.35
COL5A1-202ENST00000371820 KCNJ4P48050 445 aa12.87□□□□□ -0.35
COL5A1-202ENST00000371820 HUNKP57058 714 aa12.87□□□□□ -0.35
COL5A1-202ENST00000371820 FOXO4P98177 505 aa12.87□□□□□ -0.35
COL5A1-202ENST00000371820 NOGQ13253 232 aa12.87□□□□□ -0.35
COL5A1-202ENST00000371820 POLR2AP24928 1970 aaKnown RBP12.87□□□□□ -0.35
COL5A1-202ENST00000371820 RBM26Q5T8P6 1007 aaKnown RBP12.86□□□□□ -0.35
COL5A1-202ENST00000371820 LMBR1LQ6UX01 489 aa12.86□□□□□ -0.35
COL5A1-202ENST00000371820 AGBL3Q8NEM8 1001 aa12.86□□□□□ -0.35
COL5A1-202ENST00000371820 DCPSQ96C86 337 aaKnown RBP12.86□□□□□ -0.35
COL5A1-202ENST00000371820 COA1Q9GZY4 146 aa12.86□□□□□ -0.35
COL5A1-202ENST00000371820 GBA2Q9HCG7 927 aaPredicted RBP12.86□□□□□ -0.35
COL5A1-202ENST00000371820 GGA3Q9NZ52 723 aa12.86□□□□□ -0.35
COL5A1-202ENST00000371820 ZNF804BA4D1E1 1349 aa12.86□□□□□ -0.35
COL5A1-202ENST00000371820 UTYO14607 1347 aa12.86□□□□□ -0.35
COL5A1-202ENST00000371820 USP17L3A6NCW0 530 aa12.85□□□□□ -0.35
COL5A1-202ENST00000371820 USP17L4A6NCW7 530 aa12.85□□□□□ -0.35
COL5A1-202ENST00000371820 ZNF280AP59817 542 aaPredicted RBP12.85□□□□□ -0.35
COL5A1-202ENST00000371820 CHRNDQ07001 517 aa12.85□□□□□ -0.35
COL5A1-202ENST00000371820 RSBN1LQ6PCB5 846 aaPredicted RBP12.85□□□□□ -0.35
COL5A1-202ENST00000371820 USP17L1Q7RTZ2 530 aa12.85□□□□□ -0.35
COL5A1-202ENST00000371820 CHMP4BQ9H444 224 aaKnown RBP12.85□□□□□ -0.35
COL5A1-202ENST00000371820 CNNM1Q9NRU3 951 aa12.85□□□□□ -0.35
COL5A1-202ENST00000371820 ZNF646O15015 1829 aaPredicted RBP12.85□□□□□ -0.35
COL5A1-202ENST00000371820 MYO3BQ8WXR4 1341 aa12.85□□□□□ -0.35
COL5A1-202ENST00000371820 FAM155AB1AL88 458 aaPredicted RBP12.84□□□□□ -0.35
COL5A1-202ENST00000371820 MMP14P50281 582 aa12.84□□□□□ -0.35
COL5A1-202ENST00000371820 RGMBQ6NW40 437 aa12.84□□□□□ -0.35
COL5A1-202ENST00000371820 LDHAL6AQ6ZMR3 332 aa12.84□□□□□ -0.35
COL5A1-202ENST00000371820 SULF1Q8IWU6 871 aa12.84□□□□□ -0.35
COL5A1-202ENST00000371820 C2orf69Q8N8R5 385 aa12.84□□□□□ -0.35
COL5A1-202ENST00000371820 ZIC5Q96T25 663 aa12.84□□□□□ -0.35
COL5A1-202ENST00000371820 GMLQ99445 158 aa12.84□□□□□ -0.35
COL5A1-202ENST00000371820 API5Q9BZZ5 524 aaKnown RBP12.84□□□□□ -0.35
COL5A1-202ENST00000371820 HDAC5Q9UQL6 1122 aa12.84□□□□□ -0.35
COL5A1-202ENST00000371820 ASTN2O75129 1339 aaPredicted RBP12.84□□□□□ -0.35
COL5A1-202ENST00000371820 KIF16BQ96L93 1317 aa12.84□□□□□ -0.35
COL5A1-202ENST00000371820 EIF5BO60841 1220 aaKnown RBP12.83□□□□□ -0.36
COL5A1-202ENST00000371820 NBPF7P0C2Y1 421 aaPredicted RBP12.83□□□□□ -0.36
COL5A1-202ENST00000371820 SUCLG2Q96I99 432 aa12.83□□□□□ -0.36
COL5A1-202ENST00000371820 BCL11AQ9H165 835 aa12.83□□□□□ -0.36
COL5A1-202ENST00000371820 RWDD1Q9H446 243 aaPredicted RBP12.83□□□□□ -0.36
COL5A1-202ENST00000371820 A0A1B0GUL6 1792 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms