RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 MACROD2A1Z1Q3 448 aa22.48■■□□□ 1.19
LMO4-202ENST00000370544 TMCO5BA8MYB1 307 aa22.48■■□□□ 1.19
LMO4-202ENST00000370544 UBASH3AP57075 661 aa22.48■■□□□ 1.19
LMO4-202ENST00000370544 CCDC171Q6TFL3 1326 aa22.48■■□□□ 1.19
LMO4-202ENST00000370544 IL13P35225 146 aa22.47■■□□□ 1.19
LMO4-202ENST00000370544 DACT1Q9NYF0 836 aa22.47■■□□□ 1.19
LMO4-202ENST00000370544 SBNO2Q9Y2G9 1366 aa22.47■■□□□ 1.19
LMO4-202ENST00000370544 APOBRQ0VD83 1088 aa22.47■■□□□ 1.19
LMO4-202ENST00000370544 CHST3Q7LGC8 479 aa22.47■■□□□ 1.19
LMO4-202ENST00000370544 GSTTP1A0A1W2PQM5 241 aa22.47■■□□□ 1.19
LMO4-202ENST00000370544 ATP7AQ04656 1500 aa22.47■■□□□ 1.19
LMO4-202ENST00000370544 IFFO1Q0D2I5 559 aa22.47■■□□□ 1.19
LMO4-202ENST00000370544 DYDC1Q8WWB3 177 aa22.47■■□□□ 1.19
LMO4-202ENST00000370544 RUFY3Q7L099 469 aa22.46■■□□□ 1.19
LMO4-202ENST00000370544 CTAGE1Q96RT6 745 aa22.46■■□□□ 1.19
LMO4-202ENST00000370544 ANKRD2Q9GZV1 360 aa22.46■■□□□ 1.19
LMO4-202ENST00000370544 ERICH4A6NGS2 130 aa22.46■■□□□ 1.19
LMO4-202ENST00000370544 OGFOD1Q8N543 542 aa22.46■■□□□ 1.19
LMO4-202ENST00000370544 POTEB2H3BUK9 544 aa22.46■■□□□ 1.19
LMO4-202ENST00000370544 ZBTB7BO15156 539 aaPredicted RBP22.46■■□□□ 1.19
LMO4-202ENST00000370544 G2E3Q7L622 706 aa22.46■■□□□ 1.19
LMO4-202ENST00000370544 MPHOSPH6Q99547 160 aaKnown RBP22.46■■□□□ 1.19
LMO4-202ENST00000370544 FAM200AQ8TCP9 573 aa22.46■■□□□ 1.19
LMO4-202ENST00000370544 NAA15Q9BXJ9 866 aaKnown RBP22.46■■□□□ 1.19
LMO4-202ENST00000370544 MCM9Q9NXL9 1143 aa22.46■■□□□ 1.19
LMO4-202ENST00000370544 HSPA2P54652 639 aa22.45■■□□□ 1.19
LMO4-202ENST00000370544 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.45■■□□□ 1.19
LMO4-202ENST00000370544 BABAM1Q9NWV8 329 aa22.45■■□□□ 1.18
LMO4-202ENST00000370544 C6orf50Q9HD87 102 aa22.45■■□□□ 1.18
LMO4-202ENST00000370544 SPTLC2O15270 562 aa22.45■■□□□ 1.18
LMO4-202ENST00000370544 MYCNP04198 464 aaPredicted RBP22.45■■□□□ 1.18
LMO4-202ENST00000370544 PLCG2P16885 1265 aa22.45■■□□□ 1.18
LMO4-202ENST00000370544 NOP2P46087 812 aaKnown RBP22.45■■□□□ 1.18
LMO4-202ENST00000370544 DHX32Q7L7V1 743 aaKnown RBP22.45■■□□□ 1.18
LMO4-202ENST00000370544 TRIM75PA6NK02 468 aa22.44■■□□□ 1.18
LMO4-202ENST00000370544 RTL1A6NKG5 1358 aa22.44■■□□□ 1.18
LMO4-202ENST00000370544 PAXIP1Q6ZW49 1069 aaPredicted RBP22.44■■□□□ 1.18
LMO4-202ENST00000370544 BICD1Q96G01 975 aa22.44■■□□□ 1.18
LMO4-202ENST00000370544 KIF21AQ7Z4S6 1674 aa22.44■■□□□ 1.18
LMO4-202ENST00000370544 FERMT2Q96AC1 680 aa22.44■■□□□ 1.18
LMO4-202ENST00000370544 NPC1L1Q9UHC9 1359 aa22.44■■□□□ 1.18
LMO4-202ENST00000370544 NSFL1CQ9UNZ2 370 aaKnown RBP22.44■■□□□ 1.18
LMO4-202ENST00000370544 ZNF790Q6PG37 636 aa22.44■■□□□ 1.18
LMO4-202ENST00000370544 ADGRL2O95490 1459 aa22.43■■□□□ 1.18
LMO4-202ENST00000370544 DISP1Q96F81 1524 aa22.43■■□□□ 1.18
LMO4-202ENST00000370544 CEP135Q66GS9 1140 aa22.43■■□□□ 1.18
LMO4-202ENST00000370544 CCDC174Q6PII3 467 aa22.43■■□□□ 1.18
LMO4-202ENST00000370544 BTG4Q9NY30 223 aa22.43■■□□□ 1.18
LMO4-202ENST00000370544 SHTN1A0MZ66 631 aa22.43■■□□□ 1.18
LMO4-202ENST00000370544 PTPDC1A2A3K4 754 aa22.43■■□□□ 1.18
LMO4-202ENST00000370544 PLBD2Q8NHP8 589 aa22.43■■□□□ 1.18
LMO4-202ENST00000370544 ZC3H12CQ9C0D7 883 aaKnown RBP22.43■■□□□ 1.18
LMO4-202ENST00000370544 MMRN2Q9H8L6 949 aa22.43■■□□□ 1.18
LMO4-202ENST00000370544 CTNNA2P26232 953 aa22.43■■□□□ 1.18
LMO4-202ENST00000370544 CALML3P27482 149 aa22.43■■□□□ 1.18
LMO4-202ENST00000370544 KRT2P35908 639 aa22.43■■□□□ 1.18
LMO4-202ENST00000370544 SMARCC2Q8TAQ2 1214 aa22.43■■□□□ 1.18
LMO4-202ENST00000370544 RRP36Q96EU6 259 aaKnown RBP22.43■■□□□ 1.18
LMO4-202ENST00000370544 HELLSQ9NRZ9 838 aa22.43■■□□□ 1.18
LMO4-202ENST00000370544 EHBP1Q8NDI1 1231 aa22.43■■□□□ 1.18
LMO4-202ENST00000370544 GNG11P61952 73 aa22.42■■□□□ 1.18
LMO4-202ENST00000370544 SPAG1Q07617 926 aa22.42■■□□□ 1.18
LMO4-202ENST00000370544 USP26Q9BXU7 913 aa22.42■■□□□ 1.18
LMO4-202ENST00000370544 CCDC91Q7Z6B0 441 aa22.42■■□□□ 1.18
LMO4-202ENST00000370544 AOPEPQ8N6M6 819 aa22.42■■□□□ 1.18
LMO4-202ENST00000370544 DNAJC25Q9H1X3 360 aa22.42■■□□□ 1.18
LMO4-202ENST00000370544 ATP10AO60312 1499 aa22.42■■□□□ 1.18
LMO4-202ENST00000370544 ASIC1P78348 528 aa22.42■■□□□ 1.18
LMO4-202ENST00000370544 PRPF4BQ13523 1007 aaKnown RBP22.42■■□□□ 1.18
LMO4-202ENST00000370544 DHX58Q96C10 678 aa22.42■■□□□ 1.18
LMO4-202ENST00000370544 AKR1B10O60218 316 aa22.41■■□□□ 1.18
LMO4-202ENST00000370544 LDHBP07195 334 aaKnown RBP22.41■■□□□ 1.18
LMO4-202ENST00000370544 METTL22Q9BUU2 404 aaPredicted RBP22.41■■□□□ 1.18
LMO4-202ENST00000370544 TAOK3Q9H2K8 898 aa22.41■■□□□ 1.18
LMO4-202ENST00000370544 JADE2Q9NQC1 790 aa22.41■■□□□ 1.18
LMO4-202ENST00000370544 HSP90AA4PQ58FG1 418 aa22.41■■□□□ 1.18
LMO4-202ENST00000370544 PARP3Q9Y6F1 533 aa22.41■■□□□ 1.18
LMO4-202ENST00000370544 HLTFQ14527 1009 aaKnown RBP eCLIP22.41■■□□□ 1.18
LMO4-202ENST00000370544 TFCP2L1Q9NZI6 479 aa22.41■■□□□ 1.18
LMO4-202ENST00000370544 RAB3GAP1Q15042 981 aa22.41■■□□□ 1.18
LMO4-202ENST00000370544 PSMA7O14818 248 aa22.4■■□□□ 1.18
LMO4-202ENST00000370544 CCDC172P0C7W6 258 aa22.4■■□□□ 1.18
LMO4-202ENST00000370544 PUF60Q9UHX1 559 aaKnown RBP22.4■■□□□ 1.18
LMO4-202ENST00000370544 GCOM1H8Y6P7 765 aaPredicted RBP22.4■■□□□ 1.18
LMO4-202ENST00000370544 MYZAPP0CAP1 466 aa22.4■■□□□ 1.18
LMO4-202ENST00000370544 INTS4Q96HW7 963 aaKnown RBP22.4■■□□□ 1.18
LMO4-202ENST00000370544 HOXB7P09629 217 aa22.4■■□□□ 1.18
LMO4-202ENST00000370544 MAP2K1Q02750 393 aaPredicted RBP22.4■■□□□ 1.18
LMO4-202ENST00000370544 HOOK3Q86VS8 718 aa22.4■■□□□ 1.18
LMO4-202ENST00000370544 PLCD4Q9BRC7 762 aa22.39■■□□□ 1.18
LMO4-202ENST00000370544 IFI16Q16666 785 aaKnown RBP22.39■■□□□ 1.17
LMO4-202ENST00000370544 FAM89AQ96GI7 184 aa22.39■■□□□ 1.17
LMO4-202ENST00000370544 PAXBP1Q9Y5B6 917 aa22.39■■□□□ 1.17
LMO4-202ENST00000370544 EYA2O00167 538 aa22.39■■□□□ 1.17
LMO4-202ENST00000370544 CBX1P83916 185 aa22.39■■□□□ 1.17
LMO4-202ENST00000370544 SPAG5Q96R06 1193 aa22.39■■□□□ 1.17
LMO4-202ENST00000370544 BCCIPQ9P287 314 aaKnown RBP eCLIP22.39■■□□□ 1.17
LMO4-202ENST00000370544 TBC1D5Q92609 795 aa22.38■■□□□ 1.17
LMO4-202ENST00000370544 ZMYM4Q5VZL5 1548 aa22.38■■□□□ 1.17
LMO4-202ENST00000370544 MBD4O95243 580 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms