RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 NASPP49321 788 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-205ENST00000368213 GTF2IP78347 998 aa12.37□□□□□ -0.43
PTPRK-205ENST00000368213 BRINP3Q76B58 766 aa12.37□□□□□ -0.43
PTPRK-205ENST00000368213 BACH1O14867 736 aa12.37□□□□□ -0.43
PTPRK-205ENST00000368213 TCERG1LQ5VWI1 586 aa12.37□□□□□ -0.43
PTPRK-205ENST00000368213 CCDC174Q6PII3 467 aa12.37□□□□□ -0.43
PTPRK-205ENST00000368213 BRF1Q92994 677 aa12.37□□□□□ -0.43
PTPRK-205ENST00000368213 CRKLP46109 303 aaKnown RBP12.37□□□□□ -0.43
PTPRK-205ENST00000368213 CERS3Q8IU89 383 aa12.37□□□□□ -0.43
PTPRK-205ENST00000368213 TTC16Q8NEE8 873 aa12.37□□□□□ -0.43
PTPRK-205ENST00000368213 RBM6P78332 1123 aaKnown RBP12.37□□□□□ -0.43
PTPRK-205ENST00000368213 KDM5CP41229 1560 aa12.37□□□□□ -0.43
PTPRK-205ENST00000368213 CACNA2D4Q7Z3S7 1137 aa12.36□□□□□ -0.43
PTPRK-205ENST00000368213 PLCD3Q8N3E9 789 aa12.36□□□□□ -0.43
PTPRK-205ENST00000368213 CNNM3Q8NE01 707 aa12.36□□□□□ -0.43
PTPRK-205ENST00000368213 TCHPQ9BT92 498 aa12.36□□□□□ -0.43
PTPRK-205ENST00000368213 LRRC2Q9BYS8 371 aa12.36□□□□□ -0.43
PTPRK-205ENST00000368213 ERLIN2O94905 339 aa12.36□□□□□ -0.43
PTPRK-205ENST00000368213 PARP1P09874 1014 aaKnown RBP12.36□□□□□ -0.43
PTPRK-205ENST00000368213 SCAND2PQ9GZW5 306 aaPredicted RBP12.36□□□□□ -0.43
PTPRK-205ENST00000368213 NMIQ13287 307 aaPredicted RBP12.36□□□□□ -0.43
PTPRK-205ENST00000368213 MROH5Q6ZUA9 1318 aa12.36□□□□□ -0.43
PTPRK-205ENST00000368213 SPC24Q8NBT2 197 aa12.36□□□□□ -0.43
PTPRK-205ENST00000368213 WDR17Q8IZU2 1322 aa12.36□□□□□ -0.43
PTPRK-205ENST00000368213 PDE1AP54750 535 aa12.36□□□□□ -0.43
PTPRK-205ENST00000368213 LPIN2Q92539 896 aa12.36□□□□□ -0.43
PTPRK-205ENST00000368213 RBM27Q9P2N5 1060 aaKnown RBP12.36□□□□□ -0.43
PTPRK-205ENST00000368213 SAMD9LQ8IVG5 1584 aa12.36□□□□□ -0.43
PTPRK-205ENST00000368213 TIMM10P62072 90 aa12.35□□□□□ -0.43
PTPRK-205ENST00000368213 PYM1Q9BRP8 204 aaKnown RBP12.35□□□□□ -0.43
PTPRK-205ENST00000368213 ACBD3Q9H3P7 528 aa12.35□□□□□ -0.43
PTPRK-205ENST00000368213 PUF60Q9UHX1 559 aaKnown RBP12.35□□□□□ -0.43
PTPRK-205ENST00000368213 ZBTB21Q9ULJ3 1066 aa12.35□□□□□ -0.43
PTPRK-205ENST00000368213 TTF2Q9UNY4 1162 aaKnown RBP12.35□□□□□ -0.43
PTPRK-205ENST00000368213 THRAP3Q9Y2W1 955 aaKnown RBP12.35□□□□□ -0.43
PTPRK-205ENST00000368213 RBM8AQ9Y5S9 174 aaKnown RBP12.35□□□□□ -0.43
PTPRK-205ENST00000368213 TTC41PQ6P2S7 1318 aa12.35□□□□□ -0.43
PTPRK-205ENST00000368213 DOK7Q18PE1 504 aa12.35□□□□□ -0.43
PTPRK-205ENST00000368213 VPS36Q86VN1 386 aa12.35□□□□□ -0.43
PTPRK-205ENST00000368213 XAGE2Q96GT9 111 aa12.35□□□□□ -0.43
PTPRK-205ENST00000368213 PRC1O43663 620 aa12.35□□□□□ -0.43
PTPRK-205ENST00000368213 ZBED4O75132 1171 aa12.35□□□□□ -0.43
PTPRK-205ENST00000368213 ATP2B4P23634 1241 aa12.35□□□□□ -0.43
PTPRK-205ENST00000368213 CCDC40Q4G0X9 1142 aa12.35□□□□□ -0.43
PTPRK-205ENST00000368213 GPCPD1Q9NPB8 672 aa12.35□□□□□ -0.43
PTPRK-205ENST00000368213 AATFQ9NY61 560 aaKnown RBP eCLIP12.35□□□□□ -0.43
PTPRK-205ENST00000368213 G2E3Q7L622 706 aa12.35□□□□□ -0.43
PTPRK-205ENST00000368213 TEKT1Q969V4 418 aa12.35□□□□□ -0.43
PTPRK-205ENST00000368213 CCDC97Q96F63 343 aaPredicted RBP12.35□□□□□ -0.43
PTPRK-205ENST00000368213 ERVK-7P63135 1459 aa12.35□□□□□ -0.43
PTPRK-205ENST00000368213 USP8P40818 1118 aa12.35□□□□□ -0.43
PTPRK-205ENST00000368213 CAMK4Q16566 473 aa12.35□□□□□ -0.43
PTPRK-205ENST00000368213 SKIDA1Q1XH10 827 aa12.35□□□□□ -0.43
PTPRK-205ENST00000368213 ARHGEF5Q12774 1597 aa12.34□□□□□ -0.43
PTPRK-205ENST00000368213 TBC1D9Q6ZT07 1266 aa12.34□□□□□ -0.43
PTPRK-205ENST00000368213 VSIG10Q8N0Z9 540 aa12.34□□□□□ -0.43
PTPRK-205ENST00000368213 ALG1Q9BT22 464 aa12.34□□□□□ -0.43
PTPRK-205ENST00000368213 NEFHP12036 1026 aa12.34□□□□□ -0.43
PTPRK-205ENST00000368213 OTUD7BQ6GQQ9 843 aa12.34□□□□□ -0.43
PTPRK-205ENST00000368213 AS3MTQ9HBK9 375 aa12.34□□□□□ -0.43
PTPRK-205ENST00000368213 SERPINB2P05120 415 aa12.34□□□□□ -0.43
PTPRK-205ENST00000368213 MFSD14BQ5SR56 506 aa12.34□□□□□ -0.43
PTPRK-205ENST00000368213 DCAF15Q66K64 600 aa12.34□□□□□ -0.43
PTPRK-205ENST00000368213 PANK2Q9BZ23 570 aa12.34□□□□□ -0.43
PTPRK-205ENST00000368213 ARGLU1Q9NWB6 273 aaPredicted RBP12.34□□□□□ -0.43
PTPRK-205ENST00000368213 GJB2P29033 226 aa12.34□□□□□ -0.43
PTPRK-205ENST00000368213 ARHGEF6Q15052 776 aa12.34□□□□□ -0.43
PTPRK-205ENST00000368213 DALRD3Q5D0E6 543 aaKnown RBP12.34□□□□□ -0.43
PTPRK-205ENST00000368213 BMP2KLQ5H9B9 411 aa12.34□□□□□ -0.43
PTPRK-205ENST00000368213 ASAP1Q9ULH1 1129 aa12.34□□□□□ -0.43
PTPRK-205ENST00000368213 ENOX2Q16206 610 aaKnown RBP12.33□□□□□ -0.43
PTPRK-205ENST00000368213 PARD3Q8TEW0 1356 aa12.33□□□□□ -0.44
PTPRK-205ENST00000368213 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.33□□□□□ -0.44
PTPRK-205ENST00000368213 PPEF1O14829 653 aaPredicted RBP12.33□□□□□ -0.44
PTPRK-205ENST00000368213 PHACTR2O75167 634 aa12.33□□□□□ -0.44
PTPRK-205ENST00000368213 RBM25P49756 843 aaKnown RBP12.33□□□□□ -0.44
PTPRK-205ENST00000368213 KCNQ4P56696 695 aa12.33□□□□□ -0.44
PTPRK-205ENST00000368213 EIF4A1P60842 406 aaKnown RBP12.33□□□□□ -0.44
PTPRK-205ENST00000368213 MAP3K11Q16584 847 aa12.33□□□□□ -0.44
PTPRK-205ENST00000368213 CFAP100Q494V2 611 aa12.33□□□□□ -0.44
PTPRK-205ENST00000368213 JAKMIP3Q5VZ66 844 aa12.33□□□□□ -0.44
PTPRK-205ENST00000368213 KIAA1328Q86T90 577 aa12.33□□□□□ -0.44
PTPRK-205ENST00000368213 BACH2Q9BYV9 841 aa12.33□□□□□ -0.44
PTPRK-205ENST00000368213 ARMT1Q9H993 441 aa12.33□□□□□ -0.44
PTPRK-205ENST00000368213 USP40Q9NVE5 1235 aa12.33□□□□□ -0.44
PTPRK-205ENST00000368213 SLC5A4Q9NY91 659 aa12.33□□□□□ -0.44
PTPRK-205ENST00000368213 CTSWP56202 376 aa12.33□□□□□ -0.44
PTPRK-205ENST00000368213 GCKRQ14397 625 aa12.33□□□□□ -0.44
PTPRK-205ENST00000368213 TAF12Q16514 161 aa12.33□□□□□ -0.44
PTPRK-205ENST00000368213 ARHGEF25Q86VW2 580 aa12.33□□□□□ -0.44
PTPRK-205ENST00000368213 GOPCQ9HD26 462 aa12.33□□□□□ -0.44
PTPRK-205ENST00000368213 USP37Q86T82 979 aa12.33□□□□□ -0.44
PTPRK-205ENST00000368213 TAF4BQ92750 862 aa12.33□□□□□ -0.44
PTPRK-205ENST00000368213 PKD2L1Q9P0L9 805 aa12.33□□□□□ -0.44
PTPRK-205ENST00000368213 ROBO2Q9HCK4 1378 aa12.33□□□□□ -0.44
PTPRK-205ENST00000368213 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.33□□□□□ -0.44
PTPRK-205ENST00000368213 PTPDC1A2A3K4 754 aa12.32□□□□□ -0.44
PTPRK-205ENST00000368213 PATL2C9JE40 543 aaKnown RBP12.32□□□□□ -0.44
PTPRK-205ENST00000368213 SDSP20132 328 aa12.32□□□□□ -0.44
PTPRK-205ENST00000368213 CALML3P27482 149 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms