RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 IL1RAPL2Q9NP60 686 aa22.33■■□□□ 1.17
CMTM3-201ENST00000361909 NRBP1Q9UHY1 535 aa22.33■■□□□ 1.17
CMTM3-201ENST00000361909 NEURL1BA8MQ27 555 aa22.33■■□□□ 1.16
CMTM3-201ENST00000361909 GRM8O00222 908 aa22.33■■□□□ 1.16
CMTM3-201ENST00000361909 TUBB4AP04350 444 aa22.33■■□□□ 1.16
CMTM3-201ENST00000361909 GJD4Q96KN9 370 aaPredicted RBP22.33■■□□□ 1.16
CMTM3-201ENST00000361909 ST3GAL1Q11201 340 aa22.32■■□□□ 1.16
CMTM3-201ENST00000361909 DHX8Q14562 1220 aaKnown RBP22.32■■□□□ 1.16
CMTM3-201ENST00000361909 ME3Q16798 604 aa22.32■■□□□ 1.16
CMTM3-201ENST00000361909 AFF2P51816 1311 aa22.32■■□□□ 1.16
CMTM3-201ENST00000361909 GOLGA6L19H0YKK7 550 aa22.32■■□□□ 1.16
CMTM3-201ENST00000361909 CTAGE5O15320 804 aa22.32■■□□□ 1.16
CMTM3-201ENST00000361909 MTX1Q13505 466 aa22.32■■□□□ 1.16
CMTM3-201ENST00000361909 CAMK4Q16566 473 aa22.32■■□□□ 1.16
CMTM3-201ENST00000361909 SURF6O75683 361 aaKnown RBP22.31■■□□□ 1.16
CMTM3-201ENST00000361909 SLU7O95391 586 aaKnown RBP22.31■■□□□ 1.16
CMTM3-201ENST00000361909 CWC27Q6UX04 472 aaKnown RBP22.31■■□□□ 1.16
CMTM3-201ENST00000361909 LEO1Q8WVC0 666 aaPredicted RBP22.31■■□□□ 1.16
CMTM3-201ENST00000361909 SLC4A9Q96Q91 983 aa22.31■■□□□ 1.16
CMTM3-201ENST00000361909 MYD88Q99836 296 aa22.31■■□□□ 1.16
CMTM3-201ENST00000361909 ZNF215Q9UL58 517 aaPredicted RBP22.31■■□□□ 1.16
CMTM3-201ENST00000361909 ATRNO75882 1429 aa22.31■■□□□ 1.16
CMTM3-201ENST00000361909 ONECUT3O60422 494 aaPredicted RBP22.31■■□□□ 1.16
CMTM3-201ENST00000361909 GCKRQ14397 625 aa22.31■■□□□ 1.16
CMTM3-201ENST00000361909 CKAP2LQ8IYA6 745 aa22.31■■□□□ 1.16
CMTM3-201ENST00000361909 TRPC5Q9UL62 973 aaPredicted RBP22.31■■□□□ 1.16
CMTM3-201ENST00000361909 NUP188Q5SRE5 1749 aa22.3■■□□□ 1.16
CMTM3-201ENST00000361909 HIP1O00291 1037 aa22.3■■□□□ 1.16
CMTM3-201ENST00000361909 CYP19A1P11511 503 aaPredicted RBP22.3■■□□□ 1.16
CMTM3-201ENST00000361909 CDC37L1Q7L3B6 337 aa22.3■■□□□ 1.16
CMTM3-201ENST00000361909 SMARCC1Q92922 1105 aaPredicted RBP22.3■■□□□ 1.16
CMTM3-201ENST00000361909 ACSBG1Q96GR2 724 aa22.3■■□□□ 1.16
CMTM3-201ENST00000361909 CICQ96RK0 1608 aaPredicted RBP22.3■■□□□ 1.16
CMTM3-201ENST00000361909 GSDMDP57764 484 aa22.29■■□□□ 1.16
CMTM3-201ENST00000361909 DNAJC2Q99543 621 aaKnown RBP22.29■■□□□ 1.16
CMTM3-201ENST00000361909 TJP1Q07157 1748 aa22.29■■□□□ 1.16
CMTM3-201ENST00000361909 BMS1Q14692 1282 aaKnown RBP22.29■■□□□ 1.16
CMTM3-201ENST00000361909 NECTIN1Q15223 517 aa22.29■■□□□ 1.16
CMTM3-201ENST00000361909 PPP1R42Q7Z4L9 355 aa22.29■■□□□ 1.16
CMTM3-201ENST00000361909 GPATCH3Q96I76 525 aa22.29■■□□□ 1.16
CMTM3-201ENST00000361909 CCDC144BQ3MJ40 725 aa22.28■■□□□ 1.16
CMTM3-201ENST00000361909 TTLL7Q6ZT98 887 aa22.28■■□□□ 1.16
CMTM3-201ENST00000361909 CCDC144CPQ8IYA2 1237 aa22.28■■□□□ 1.16
CMTM3-201ENST00000361909 STX1AQ16623 288 aa22.28■■□□□ 1.16
CMTM3-201ENST00000361909 PRPF40BQ6NWY9 871 aaKnown RBP22.28■■□□□ 1.16
CMTM3-201ENST00000361909 FBXO38Q6PIJ6 1188 aa22.28■■□□□ 1.16
CMTM3-201ENST00000361909 LARP6Q9BRS8 491 aaKnown RBP22.28■■□□□ 1.16
CMTM3-201ENST00000361909 DNAJC25Q9H1X3 360 aa22.28■■□□□ 1.16
CMTM3-201ENST00000361909 COL15A1P39059 1388 aa22.28■■□□□ 1.16
CMTM3-201ENST00000361909 AFDNP55196 1824 aaKnown RBP22.27■■□□□ 1.16
CMTM3-201ENST00000361909 MAP4K4O95819 1239 aaPredicted RBP22.27■■□□□ 1.16
CMTM3-201ENST00000361909 ZNF592Q92610 1267 aa22.27■■□□□ 1.16
CMTM3-201ENST00000361909 SNRKQ9NRH2 765 aa22.27■■□□□ 1.16
CMTM3-201ENST00000361909 KCNJ6P48051 423 aa22.26■■□□□ 1.15
CMTM3-201ENST00000361909 NAA30Q147X3 362 aaPredicted RBP22.26■■□□□ 1.15
CMTM3-201ENST00000361909 IQCB1Q15051 598 aa22.26■■□□□ 1.15
CMTM3-201ENST00000361909 ADCK5Q3MIX3 580 aa22.26■■□□□ 1.15
CMTM3-201ENST00000361909 ZNF831Q5JPB2 1677 aa22.26■■□□□ 1.15
CMTM3-201ENST00000361909 SKILP12757 684 aa22.26■■□□□ 1.15
CMTM3-201ENST00000361909 CPA1P15085 419 aa22.26■■□□□ 1.15
CMTM3-201ENST00000361909 KCNJ4P48050 445 aa22.26■■□□□ 1.15
CMTM3-201ENST00000361909 IRX5P78411 483 aaPredicted RBP22.26■■□□□ 1.15
CMTM3-201ENST00000361909 BICD2Q8TD16 824 aa22.26■■□□□ 1.15
CMTM3-201ENST00000361909 TPCN1Q9ULQ1 816 aa22.26■■□□□ 1.15
CMTM3-201ENST00000361909 MYH15Q9Y2K3 1946 aa22.26■■□□□ 1.15
CMTM3-201ENST00000361909 TULP2O00295 520 aa22.25■■□□□ 1.15
CMTM3-201ENST00000361909 SRGAP3O43295 1099 aa22.25■■□□□ 1.15
CMTM3-201ENST00000361909 CCAR2Q8N163 923 aaKnown RBP22.25■■□□□ 1.15
CMTM3-201ENST00000361909 L2HGDHQ9H9P8 463 aa22.25■■□□□ 1.15
CMTM3-201ENST00000361909 A0A0G2JS52 829 aa22.25■■□□□ 1.15
CMTM3-201ENST00000361909 H2AFXP16104 143 aaPredicted RBP22.25■■□□□ 1.15
CMTM3-201ENST00000361909 EVI5LQ96CN4 794 aa22.25■■□□□ 1.15
CMTM3-201ENST00000361909 IMPACTQ9P2X3 320 aa22.25■■□□□ 1.15
CMTM3-201ENST00000361909 LOC102724428A0A0B4J2F2 783 aa22.24■■□□□ 1.15
CMTM3-201ENST00000361909 SIK1P57059 783 aa22.24■■□□□ 1.15
CMTM3-201ENST00000361909 PTH1RQ03431 593 aa22.24■■□□□ 1.15
CMTM3-201ENST00000361909 PALLDQ8WX93 1383 aa22.24■■□□□ 1.15
CMTM3-201ENST00000361909 NR1I2O75469 434 aa22.23■■□□□ 1.15
CMTM3-201ENST00000361909 IL6STP40189 918 aaPredicted RBP22.23■■□□□ 1.15
CMTM3-201ENST00000361909 CCZ1BP86790 482 aa22.23■■□□□ 1.15
CMTM3-201ENST00000361909 CCZ1P86791 482 aaPredicted RBP22.23■■□□□ 1.15
CMTM3-201ENST00000361909 ELF2Q15723 593 aa22.23■■□□□ 1.15
CMTM3-201ENST00000361909 CREB3L3Q68CJ9 461 aa22.23■■□□□ 1.15
CMTM3-201ENST00000361909 KIF6Q6ZMV9 814 aa22.23■■□□□ 1.15
CMTM3-201ENST00000361909 SUCLG2Q96I99 432 aa22.23■■□□□ 1.15
CMTM3-201ENST00000361909 ZSCAN16Q9H4T2 348 aaPredicted RBP22.23■■□□□ 1.15
CMTM3-201ENST00000361909 CFAP45Q9UL16 551 aa22.23■■□□□ 1.15
CMTM3-201ENST00000361909 CHMP3Q9Y3E7 222 aa22.23■■□□□ 1.15
CMTM3-201ENST00000361909 FERMT3Q86UX7 667 aa22.23■■□□□ 1.15
CMTM3-201ENST00000361909 NECAB1Q8N987 351 aa22.23■■□□□ 1.15
CMTM3-201ENST00000361909 CCDC191Q8NCU4 936 aa22.23■■□□□ 1.15
CMTM3-201ENST00000361909 KAZALD1Q96I82 304 aa22.23■■□□□ 1.15
CMTM3-201ENST00000361909 NOL10Q9BSC4 688 aaKnown RBP22.23■■□□□ 1.15
CMTM3-201ENST00000361909 CCDC69A6NI79 296 aa22.22■■□□□ 1.15
CMTM3-201ENST00000361909 KCNQ2O43526 872 aa22.22■■□□□ 1.15
CMTM3-201ENST00000361909 CYP2C19P33261 490 aa22.22■■□□□ 1.15
CMTM3-201ENST00000361909 ERC1Q8IUD2 1116 aa22.22■■□□□ 1.15
CMTM3-201ENST00000361909 ECHDC1Q9NTX5 307 aa22.22■■□□□ 1.15
CMTM3-201ENST00000361909 RBM8AQ9Y5S9 174 aaKnown RBP22.22■■□□□ 1.15
CMTM3-201ENST00000361909 ATP6V1AP38606 617 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms