RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 GOLGA1Q92805 767 aa18.2■□□□□ 0.5
RTN3-205ENST00000356000 SALL3Q9BXA9 1300 aa18.2■□□□□ 0.5
RTN3-205ENST00000356000 MRFAP1Q9Y605 127 aa18.2■□□□□ 0.5
RTN3-205ENST00000356000 LARGE1O95461 756 aa18.19■□□□□ 0.5
RTN3-205ENST00000356000 USP5P45974 858 aa18.19■□□□□ 0.5
RTN3-205ENST00000356000 TEX11Q8IYF3 940 aa18.19■□□□□ 0.5
RTN3-205ENST00000356000 SPATA32Q96LK8 384 aa18.19■□□□□ 0.5
RTN3-205ENST00000356000 LARP6Q9BRS8 491 aaKnown RBP18.19■□□□□ 0.5
RTN3-205ENST00000356000 UTP14AQ9BVJ6 771 aaKnown RBP18.19■□□□□ 0.5
RTN3-205ENST00000356000 SLC12A5Q9H2X9 1139 aa18.19■□□□□ 0.5
RTN3-205ENST00000356000 VEZTQ9HBM0 779 aa18.19■□□□□ 0.5
RTN3-205ENST00000356000 ADGRL3Q9HAR2 1447 aa18.19■□□□□ 0.5
RTN3-205ENST00000356000 NEBLO76041 1014 aa18.19■□□□□ 0.5
RTN3-205ENST00000356000 FMNL3Q8IVF7 1028 aa18.19■□□□□ 0.5
RTN3-205ENST00000356000 CCDC83Q8IWF9 413 aa18.19■□□□□ 0.5
RTN3-205ENST00000356000 DDX11Q96FC9 970 aa18.19■□□□□ 0.5
RTN3-205ENST00000356000 BORCS6Q96GS4 357 aa18.19■□□□□ 0.5
RTN3-205ENST00000356000 NEXMIFQ5QGS0 1516 aa18.19■□□□□ 0.5
RTN3-205ENST00000356000 GCFC2P16383 781 aaKnown RBP18.19■□□□□ 0.5
RTN3-205ENST00000356000 PRPF38AQ8NAV1 312 aaKnown RBP18.19■□□□□ 0.5
RTN3-205ENST00000356000 ITFG2Q969R8 447 aa18.19■□□□□ 0.5
RTN3-205ENST00000356000 L1RE1Q9UN81 338 aa18.19■□□□□ 0.5
RTN3-205ENST00000356000 SNX14Q9Y5W7 946 aa18.19■□□□□ 0.5
RTN3-205ENST00000356000 COL3A1P02461 1466 aaPredicted RBP18.18■□□□□ 0.5
RTN3-205ENST00000356000 NSD2O96028 1365 aa18.18■□□□□ 0.5
RTN3-205ENST00000356000 LEO1Q8WVC0 666 aaPredicted RBP18.18■□□□□ 0.5
RTN3-205ENST00000356000 TULP1O00294 542 aaPredicted RBP18.18■□□□□ 0.5
RTN3-205ENST00000356000 TTC19Q6DKK2 380 aaPredicted RBP18.18■□□□□ 0.5
RTN3-205ENST00000356000 POTEDQ86YR6 584 aa18.18■□□□□ 0.5
RTN3-205ENST00000356000 PAX7P23759 505 aa18.17■□□□□ 0.5
RTN3-205ENST00000356000 FAM173BQ6P4H8 233 aa18.17■□□□□ 0.5
RTN3-205ENST00000356000 NBPF5PQ86XG9 351 aaPredicted RBP18.17■□□□□ 0.5
RTN3-205ENST00000356000 CTCFLQ8NI51 663 aaPredicted RBP18.17■□□□□ 0.5
RTN3-205ENST00000356000 IFIT2P09913 472 aaKnown RBP18.17■□□□□ 0.5
RTN3-205ENST00000356000 PGBD1Q96JS3 809 aa18.17■□□□□ 0.5
RTN3-205ENST00000356000 RAB21Q9UL25 225 aa18.17■□□□□ 0.5
RTN3-205ENST00000356000 KIAA0232Q92628 1395 aa18.16■□□□□ 0.5
RTN3-205ENST00000356000 TTC36A6NLP5 189 aa18.16■□□□□ 0.5
RTN3-205ENST00000356000 CTAGE5O15320 804 aa18.16■□□□□ 0.5
RTN3-205ENST00000356000 HSP90B2PQ58FF3 399 aa18.16■□□□□ 0.5
RTN3-205ENST00000356000 TMC6Q7Z403 805 aa18.16■□□□□ 0.5
RTN3-205ENST00000356000 C14orf37Q86TY3 774 aa18.16■□□□□ 0.5
RTN3-205ENST00000356000 CABS1Q96KC9 395 aa18.16■□□□□ 0.5
RTN3-205ENST00000356000 CDC37L1Q7L3B6 337 aa18.16■□□□□ 0.5
RTN3-205ENST00000356000 BICD2Q8TD16 824 aa18.16■□□□□ 0.5
RTN3-205ENST00000356000 ZSCAN31Q96LW9 406 aaPredicted RBP18.16■□□□□ 0.5
RTN3-205ENST00000356000 CLIC6Q96NY7 704 aa18.16■□□□□ 0.5
RTN3-205ENST00000356000 FAM204AQ9H8W3 233 aa18.16■□□□□ 0.5
RTN3-205ENST00000356000 SH2B1Q9NRF2 756 aaPredicted RBP18.16■□□□□ 0.5
RTN3-205ENST00000356000 HYPKQ9NX55 129 aa18.16■□□□□ 0.5
RTN3-205ENST00000356000 FAM169AQ9Y6X4 670 aa18.16■□□□□ 0.5
RTN3-205ENST00000356000 CRYMQ14894 314 aa18.15■□□□□ 0.5
RTN3-205ENST00000356000 N4BP2L2Q92802 583 aaPredicted RBP18.15■□□□□ 0.5
RTN3-205ENST00000356000 SLC24A3Q9HC58 644 aa18.15■□□□□ 0.5
RTN3-205ENST00000356000 TERF2IPQ9NYB0 399 aa18.15■□□□□ 0.5
RTN3-205ENST00000356000 MST1RQ04912 1400 aa18.15■□□□□ 0.5
RTN3-205ENST00000356000 PREPLQ4J6C6 727 aaPredicted RBP18.15■□□□□ 0.5
RTN3-205ENST00000356000 LARP1BQ659C4 914 aaKnown RBP18.15■□□□□ 0.5
RTN3-205ENST00000356000 FERMT3Q86UX7 667 aa18.15■□□□□ 0.5
RTN3-205ENST00000356000 RILPL2Q969X0 211 aa18.15■□□□□ 0.5
RTN3-205ENST00000356000 IL25Q9H293 177 aa18.15■□□□□ 0.5
RTN3-205ENST00000356000 TSHZ3Q63HK5 1081 aa18.14■□□□□ 0.49
RTN3-205ENST00000356000 TATDN2Q93075 761 aa18.14■□□□□ 0.49
RTN3-205ENST00000356000 ANO10Q9NW15 660 aa18.14■□□□□ 0.49
RTN3-205ENST00000356000 AMOTL2Q9Y2J4 779 aa18.14■□□□□ 0.49
RTN3-205ENST00000356000 PTPRUQ92729 1446 aa18.14■□□□□ 0.49
RTN3-205ENST00000356000 TMCO5BA8MYB1 307 aa18.14■□□□□ 0.49
RTN3-205ENST00000356000 POTEB2H3BUK9 544 aa18.14■□□□□ 0.49
RTN3-205ENST00000356000 ERLIN1O75477 346 aa18.14■□□□□ 0.49
RTN3-205ENST00000356000 TBC1D8BQ0IIM8 1120 aa18.14■□□□□ 0.49
RTN3-205ENST00000356000 ST3GAL1Q11201 340 aa18.14■□□□□ 0.49
RTN3-205ENST00000356000 FCHSD1Q86WN1 690 aa18.14■□□□□ 0.49
RTN3-205ENST00000356000 ZKSCAN4Q969J2 545 aaPredicted RBP18.14■□□□□ 0.49
RTN3-205ENST00000356000 TFIP11Q9UBB9 837 aaKnown RBP18.14■□□□□ 0.49
RTN3-205ENST00000356000 VWA3AA6NCI4 1184 aa18.13■□□□□ 0.49
RTN3-205ENST00000356000 CHUKO15111 745 aa18.13■□□□□ 0.49
RTN3-205ENST00000356000 NF2P35240 595 aa18.13■□□□□ 0.49
RTN3-205ENST00000356000 AOPEPQ8N6M6 819 aa18.13■□□□□ 0.49
RTN3-205ENST00000356000 ANKZF1Q9H8Y5 726 aa18.13■□□□□ 0.49
RTN3-205ENST00000356000 MPHOSPH10O00566 681 aaKnown RBP18.13■□□□□ 0.49
RTN3-205ENST00000356000 MRPL12P52815 198 aaKnown RBP18.13■□□□□ 0.49
RTN3-205ENST00000356000 MSANTD4Q8NCY6 345 aa18.13■□□□□ 0.49
RTN3-205ENST00000356000 TRIM6Q9C030 488 aaPredicted RBP18.13■□□□□ 0.49
RTN3-205ENST00000356000 XPO4Q9C0E2 1151 aaKnown RBP18.13■□□□□ 0.49
RTN3-205ENST00000356000 ACBD3Q9H3P7 528 aa18.13■□□□□ 0.49
RTN3-205ENST00000356000 DTNBO60941 627 aa18.12■□□□□ 0.49
RTN3-205ENST00000356000 GRIK3Q13003 919 aa18.12■□□□□ 0.49
RTN3-205ENST00000356000 RASEFQ8IZ41 740 aa18.12■□□□□ 0.49
RTN3-205ENST00000356000 AFAP1L1Q8TED9 768 aa18.12■□□□□ 0.49
RTN3-205ENST00000356000 CCDC102AQ96A19 550 aa18.12■□□□□ 0.49
RTN3-205ENST00000356000 EBAG9O00559 213 aa18.12■□□□□ 0.49
RTN3-205ENST00000356000 ZSCAN12O43309 604 aa18.12■□□□□ 0.49
RTN3-205ENST00000356000 HMMRO75330 724 aa18.12■□□□□ 0.49
RTN3-205ENST00000356000 CHGAP10645 457 aaKnown RBP18.12■□□□□ 0.49
RTN3-205ENST00000356000 INPP5BP32019 993 aa18.12■□□□□ 0.49
RTN3-205ENST00000356000 TWISTNBQ3B726 338 aaPredicted RBP18.12■□□□□ 0.49
RTN3-205ENST00000356000 POTEAQ6S8J7 498 aa18.12■□□□□ 0.49
RTN3-205ENST00000356000 CEP57L1Q8IYX8 460 aa18.12■□□□□ 0.49
RTN3-205ENST00000356000 NBPF3Q9H094 633 aa18.12■□□□□ 0.49
RTN3-205ENST00000356000 ELL2O00472 640 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms