RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 PHACTR2O75167 634 aa17.76■□□□□ 0.43
LMNA-201ENST00000347559 ERC1Q8IUD2 1116 aa17.76■□□□□ 0.43
LMNA-201ENST00000347559 GPATCH11Q8N954 259 aa17.76■□□□□ 0.43
LMNA-201ENST00000347559 ALKQ9UM73 1620 aa17.75■□□□□ 0.43
LMNA-201ENST00000347559 NPHP4O75161 1426 aaPredicted RBP17.75■□□□□ 0.43
LMNA-201ENST00000347559 A0A1B0GUL7 405 aa17.75■□□□□ 0.43
LMNA-201ENST00000347559 KCNJ6P48051 423 aa17.75■□□□□ 0.43
LMNA-201ENST00000347559 CTR9Q6PD62 1173 aa17.75■□□□□ 0.43
LMNA-201ENST00000347559 EAF2Q96CJ1 260 aaPredicted RBP17.75■□□□□ 0.43
LMNA-201ENST00000347559 JRKLQ9Y4A0 524 aa17.75■□□□□ 0.43
LMNA-201ENST00000347559 VWA3AA6NCI4 1184 aa17.75■□□□□ 0.43
LMNA-201ENST00000347559 GNAT3A8MTJ3 354 aa17.75■□□□□ 0.43
LMNA-201ENST00000347559 ZSCAN12O43309 604 aa17.75■□□□□ 0.43
LMNA-201ENST00000347559 STK38Q15208 465 aa17.75■□□□□ 0.43
LMNA-201ENST00000347559 CCDC129Q6ZRS4 1044 aa17.75■□□□□ 0.43
LMNA-201ENST00000347559 PACS2Q86VP3 889 aa17.75■□□□□ 0.43
LMNA-201ENST00000347559 CHPF2Q9P2E5 772 aa17.75■□□□□ 0.43
LMNA-201ENST00000347559 PPP2R2CQ9Y2T4 447 aa17.75■□□□□ 0.43
LMNA-201ENST00000347559 NDUFB9Q9Y6M9 179 aa17.75■□□□□ 0.43
LMNA-201ENST00000347559 CHGBP05060 677 aa17.74■□□□□ 0.43
LMNA-201ENST00000347559 BEND3Q5T5X7 828 aa17.74■□□□□ 0.43
LMNA-201ENST00000347559 PLEKHA4Q9H4M7 779 aa17.74■□□□□ 0.43
LMNA-201ENST00000347559 MYO5BQ9ULV0 1848 aa17.74■□□□□ 0.43
LMNA-201ENST00000347559 POLR3DP05423 398 aaPredicted RBP17.74■□□□□ 0.43
LMNA-201ENST00000347559 TOP1P11387 765 aaKnown RBP17.74■□□□□ 0.43
LMNA-201ENST00000347559 APOBRQ0VD83 1088 aa17.74■□□□□ 0.43
LMNA-201ENST00000347559 KARSQ15046 597 aaKnown RBP17.74■□□□□ 0.43
LMNA-201ENST00000347559 OTUD7BQ6GQQ9 843 aa17.74■□□□□ 0.43
LMNA-201ENST00000347559 EYA1Q99502 592 aa17.74■□□□□ 0.43
LMNA-201ENST00000347559 N4BP1O75113 896 aaKnown RBP17.74■□□□□ 0.43
LMNA-201ENST00000347559 DHX58Q96C10 678 aa17.74■□□□□ 0.43
LMNA-201ENST00000347559 HMG20BQ9P0W2 317 aa17.74■□□□□ 0.43
LMNA-201ENST00000347559 TMEM232C9JQI7 657 aa17.73■□□□□ 0.43
LMNA-201ENST00000347559 AMPHP49418 695 aa17.73■□□□□ 0.43
LMNA-201ENST00000347559 SART3Q15020 963 aaKnown RBP17.73■□□□□ 0.43
LMNA-201ENST00000347559 WWC2Q6AWC2 1192 aa17.73■□□□□ 0.43
LMNA-201ENST00000347559 NSUN7Q8NE18 718 aaKnown RBP17.73■□□□□ 0.43
LMNA-201ENST00000347559 IL17REQ8NFR9 667 aa17.73■□□□□ 0.43
LMNA-201ENST00000347559 GOLGA1Q92805 767 aa17.73■□□□□ 0.43
LMNA-201ENST00000347559 PUF60Q9UHX1 559 aaKnown RBP17.73■□□□□ 0.43
LMNA-201ENST00000347559 PSME1Q06323 249 aa17.73■□□□□ 0.43
LMNA-201ENST00000347559 NCAPHQ15003 741 aa17.73■□□□□ 0.43
LMNA-201ENST00000347559 MPHOSPH8Q99549 860 aa17.73■□□□□ 0.43
LMNA-201ENST00000347559 TAF5LO75529 589 aa17.72■□□□□ 0.43
LMNA-201ENST00000347559 G3BP1Q13283 466 aaKnown RBP eCLIP17.72■□□□□ 0.437e-9■■■□□ 16
LMNA-201ENST00000347559 CCDC12Q8WUD4 166 aaPredicted RBP17.72■□□□□ 0.43
LMNA-201ENST00000347559 XRN1Q8IZH2 1706 aaKnown RBP17.72■□□□□ 0.43
LMNA-201ENST00000347559 IVLP07476 585 aa17.72■□□□□ 0.43
LMNA-201ENST00000347559 MAP3K9P80192 1104 aa17.72■□□□□ 0.43
LMNA-201ENST00000347559 KRT32Q14532 448 aa17.72■□□□□ 0.43
LMNA-201ENST00000347559 NAA16Q6N069 864 aaPredicted RBP17.72■□□□□ 0.43
LMNA-201ENST00000347559 RABGGTAQ92696 567 aa17.72■□□□□ 0.43
LMNA-201ENST00000347559 LTV1Q96GA3 475 aaPredicted RBP17.72■□□□□ 0.43
LMNA-201ENST00000347559 ALDH8A1Q9H2A2 487 aaPredicted RBP17.72■□□□□ 0.43
LMNA-201ENST00000347559 SUGCTQ9HAC7 445 aa17.72■□□□□ 0.43
LMNA-201ENST00000347559 FAN1Q9Y2M0 1017 aa17.72■□□□□ 0.43
LMNA-201ENST00000347559 EIF3CLB5ME19 914 aaKnown RBP17.72■□□□□ 0.43
LMNA-201ENST00000347559 E2F4Q16254 413 aa17.72■□□□□ 0.43
LMNA-201ENST00000347559 SLC26A8Q96RN1 970 aa17.72■□□□□ 0.43
LMNA-201ENST00000347559 EIF3CQ99613 913 aaKnown RBP17.72■□□□□ 0.43
LMNA-201ENST00000347559 DESI2Q9BSY9 194 aa17.72■□□□□ 0.43
LMNA-201ENST00000347559 MRFAP1Q9Y605 127 aa17.72■□□□□ 0.43
LMNA-201ENST00000347559 RIMS1Q86UR5 1692 aaKnown RBP17.71■□□□□ 0.43
LMNA-201ENST00000347559 NLRP12P59046 1061 aa17.71■□□□□ 0.43
LMNA-201ENST00000347559 CCDC102AQ96A19 550 aa17.71■□□□□ 0.43
LMNA-201ENST00000347559 YY1AP1Q9H869 796 aa17.71■□□□□ 0.43
LMNA-201ENST00000347559 PSD3Q9NYI0 1048 aa17.71■□□□□ 0.43
LMNA-201ENST00000347559 CCDC9Q9Y3X0 531 aaKnown RBP17.71■□□□□ 0.43
LMNA-201ENST00000347559 CLIC4Q9Y696 253 aa17.71■□□□□ 0.43
LMNA-201ENST00000347559 PLEKHG2Q9H7P9 1386 aa17.71■□□□□ 0.43
LMNA-201ENST00000347559 CTDNEP1O95476 244 aa17.71■□□□□ 0.43
LMNA-201ENST00000347559 TEFQ10587 303 aa17.71■□□□□ 0.43
LMNA-201ENST00000347559 DHX8Q14562 1220 aaKnown RBP17.71■□□□□ 0.43
LMNA-201ENST00000347559 RSRC2Q7L4I2 434 aaKnown RBP17.71■□□□□ 0.43
LMNA-201ENST00000347559 GEMIN8Q9NWZ8 242 aaKnown RBP17.71■□□□□ 0.43
LMNA-201ENST00000347559 TXLNAP40222 546 aa17.7■□□□□ 0.42
LMNA-201ENST00000347559 ADALQ6DHV7 355 aa17.7■□□□□ 0.42
LMNA-201ENST00000347559 CHST3Q7LGC8 479 aa17.7■□□□□ 0.42
LMNA-201ENST00000347559 TEX2Q8IWB9 1127 aa17.7■□□□□ 0.42
LMNA-201ENST00000347559 IRX2Q9BZI1 471 aaPredicted RBP17.7■□□□□ 0.42
LMNA-201ENST00000347559 SASH1O94885 1247 aa17.7■□□□□ 0.42
LMNA-201ENST00000347559 CYP21A2P08686 494 aa17.7■□□□□ 0.42
LMNA-201ENST00000347559 MAGEA9P43362 315 aa17.7■□□□□ 0.42
LMNA-201ENST00000347559 ILDR1Q86SU0 546 aaPredicted RBP17.7■□□□□ 0.42
LMNA-201ENST00000347559 SMARCC2Q8TAQ2 1214 aa17.7■□□□□ 0.42
LMNA-201ENST00000347559 KLHDC4Q8TBB5 520 aa17.7■□□□□ 0.42
LMNA-201ENST00000347559 SECISBP2LQ93073 1101 aaKnown RBP17.7■□□□□ 0.42
LMNA-201ENST00000347559 PRR36Q9H6K5 1346 aa17.7■□□□□ 0.42
LMNA-201ENST00000347559 ZNF202O95125 648 aa17.7■□□□□ 0.42
LMNA-201ENST00000347559 CWF19L2Q2TBE0 894 aaKnown RBP17.7■□□□□ 0.42
LMNA-201ENST00000347559 TOGARAM2Q6ZUX3 1019 aa17.7■□□□□ 0.42
LMNA-201ENST00000347559 MTX1Q13505 466 aa17.69■□□□□ 0.42
LMNA-201ENST00000347559 JAKMIP3Q5VZ66 844 aa17.69■□□□□ 0.42
LMNA-201ENST00000347559 CCDC151A5D8V7 595 aa17.69■□□□□ 0.42
LMNA-201ENST00000347559 ACEP12821 1306 aa17.69■□□□□ 0.42
LMNA-201ENST00000347559 ADKP55263 362 aaKnown RBP17.69■□□□□ 0.42
LMNA-201ENST00000347559 NBPF6Q5VWK0 638 aa17.69■□□□□ 0.42
LMNA-201ENST00000347559 NBPF4Q96M43 638 aa17.69■□□□□ 0.42
LMNA-201ENST00000347559 BAG1Q99933 345 aaPredicted RBP17.69■□□□□ 0.42
LMNA-201ENST00000347559 ARHGAP6O43182 974 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms