RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 TSGA10IPQ3SY00 556 aa17.08■□□□□ 0.32
SMTN-202ENST00000347557 PLA2G4DQ86XP0 818 aa17.08■□□□□ 0.32
SMTN-202ENST00000347557 CTDNEP1O95476 244 aa17.07■□□□□ 0.32
SMTN-202ENST00000347557 TTLL7Q6ZT98 887 aa17.07■□□□□ 0.32
SMTN-202ENST00000347557 DHX37Q8IY37 1157 aaKnown RBP17.07■□□□□ 0.32
SMTN-202ENST00000347557 AOPEPQ8N6M6 819 aa17.07■□□□□ 0.32
SMTN-202ENST00000347557 SYTL4Q96C24 671 aaPredicted RBP17.07■□□□□ 0.32
SMTN-202ENST00000347557 GJB4Q9NTQ9 266 aa17.07■□□□□ 0.32
SMTN-202ENST00000347557 E7EWF7 191 aa17.07■□□□□ 0.32
SMTN-202ENST00000347557 CCDC112Q8NEF3 446 aa17.07■□□□□ 0.32
SMTN-202ENST00000347557 MARF1Q9Y4F3 1742 aaKnown RBP17.07■□□□□ 0.32
SMTN-202ENST00000347557 USP27XA6NNY8 438 aa17.06■□□□□ 0.32
SMTN-202ENST00000347557 PFKFB2O60825 505 aa17.06■□□□□ 0.32
SMTN-202ENST00000347557 MED1Q15648 1581 aaPredicted RBP17.06■□□□□ 0.32
SMTN-202ENST00000347557 STX1AQ16623 288 aa17.06■□□□□ 0.32
SMTN-202ENST00000347557 PUS3Q9BZE2 481 aaKnown RBP17.06■□□□□ 0.32
SMTN-202ENST00000347557 A1BGP04217 495 aa17.06■□□□□ 0.32
SMTN-202ENST00000347557 SKILP12757 684 aa17.06■□□□□ 0.32
SMTN-202ENST00000347557 ZNF396Q96N95 335 aaPredicted RBP17.06■□□□□ 0.32
SMTN-202ENST00000347557 ALDH8A1Q9H2A2 487 aaPredicted RBP17.06■□□□□ 0.32
SMTN-202ENST00000347557 KIF13AQ9H1H9 1805 aa17.06■□□□□ 0.32
SMTN-202ENST00000347557 KDM3BQ7LBC6 1761 aa17.06■□□□□ 0.32
SMTN-202ENST00000347557 CYP27B1O15528 508 aa17.05■□□□□ 0.32
SMTN-202ENST00000347557 HSPD1P10809 573 aaKnown RBP17.05■□□□□ 0.32
SMTN-202ENST00000347557 NCAPD2Q15021 1401 aa17.05■□□□□ 0.32
SMTN-202ENST00000347557 STK38Q15208 465 aa17.05■□□□□ 0.32
SMTN-202ENST00000347557 BRD2P25440 801 aaKnown RBP17.05■□□□□ 0.32
SMTN-202ENST00000347557 SMC2O95347 1197 aa17.04■□□□□ 0.32
SMTN-202ENST00000347557 HMGB1P09429 215 aaKnown RBP17.04■□□□□ 0.32
SMTN-202ENST00000347557 PDIA3P30101 505 aaKnown RBP17.04■□□□□ 0.32
SMTN-202ENST00000347557 ADD1P35611 737 aaKnown RBP17.04■□□□□ 0.32
SMTN-202ENST00000347557 IQCB1Q15051 598 aa17.04■□□□□ 0.32
SMTN-202ENST00000347557 CEP135Q66GS9 1140 aa17.04■□□□□ 0.32
SMTN-202ENST00000347557 A0A1B0GUL7 405 aa17.03■□□□□ 0.32
SMTN-202ENST00000347557 CCDC69A6NI79 296 aa17.03■□□□□ 0.32
SMTN-202ENST00000347557 N4BP2Q86UW6 1770 aaPredicted RBP17.03■□□□□ 0.32
SMTN-202ENST00000347557 M0R2C6 588 aa17.03■□□□□ 0.32
SMTN-202ENST00000347557 CPLX1O14810 134 aa17.03■□□□□ 0.32
SMTN-202ENST00000347557 RBM43Q6ZSC3 357 aaKnown RBP17.03■□□□□ 0.32
SMTN-202ENST00000347557 LRRC8AQ8IWT6 810 aa17.03■□□□□ 0.32
SMTN-202ENST00000347557 RCOR1Q9UKL0 485 aa17.03■□□□□ 0.32
SMTN-202ENST00000347557 ADGRL3Q9HAR2 1447 aa17.03■□□□□ 0.32
SMTN-202ENST00000347557 KDM6AO15550 1401 aaPredicted RBP17.03■□□□□ 0.32
SMTN-202ENST00000347557 CEP57L1Q8IYX8 460 aa17.03■□□□□ 0.32
SMTN-202ENST00000347557 PLBD2Q8NHP8 589 aa17.03■□□□□ 0.32
SMTN-202ENST00000347557 SMARCC2Q8TAQ2 1214 aa17.03■□□□□ 0.32
SMTN-202ENST00000347557 ANO10Q9NW15 660 aa17.03■□□□□ 0.32
SMTN-202ENST00000347557 MAST3O60307 1309 aa17.02■□□□□ 0.32
SMTN-202ENST00000347557 CWC25Q9NXE8 425 aaPredicted RBP17.02■□□□□ 0.32
SMTN-202ENST00000347557 PCDHA7Q9UN72 937 aa17.02■□□□□ 0.32
SMTN-202ENST00000347557 FAM160A1Q05DH4 1040 aa17.02■□□□□ 0.31
SMTN-202ENST00000347557 NCBP1Q09161 790 aaKnown RBP17.02■□□□□ 0.31
SMTN-202ENST00000347557 PTPN14Q15678 1187 aa17.02■□□□□ 0.31
SMTN-202ENST00000347557 NAA16Q6N069 864 aaPredicted RBP17.02■□□□□ 0.31
SMTN-202ENST00000347557 ATG9AQ7Z3C6 839 aa17.02■□□□□ 0.31
SMTN-202ENST00000347557 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.02■□□□□ 0.31
SMTN-202ENST00000347557 DCAF5Q96JK2 942 aa17.02■□□□□ 0.31
SMTN-202ENST00000347557 CLIC4Q9Y696 253 aa17.02■□□□□ 0.31
SMTN-202ENST00000347557 SMTNL1A8MU46 457 aa17.01■□□□□ 0.31
SMTN-202ENST00000347557 RNF113AO15541 343 aaKnown RBP17.01■□□□□ 0.31
SMTN-202ENST00000347557 RXRAP19793 462 aa17.01■□□□□ 0.31
SMTN-202ENST00000347557 SNW1Q13573 536 aaKnown RBP17.01■□□□□ 0.31
SMTN-202ENST00000347557 RABL6Q3YEC7 729 aaPredicted RBP17.01■□□□□ 0.31
SMTN-202ENST00000347557 TTC39AQ5SRH9 613 aa17.01■□□□□ 0.31
SMTN-202ENST00000347557 PI16Q6UXB8 463 aa17.01■□□□□ 0.31
SMTN-202ENST00000347557 OSBP2Q969R2 916 aa17.01■□□□□ 0.31
SMTN-202ENST00000347557 C8orf76Q96K31 380 aa17.01■□□□□ 0.31
SMTN-202ENST00000347557 LLPHQ9BRT6 129 aaKnown RBP17.01■□□□□ 0.31
SMTN-202ENST00000347557 CEP126Q9P2H0 1117 aa17.01■□□□□ 0.31
SMTN-202ENST00000347557 KLF18A0A0U1RQI7 1052 aa17.01■□□□□ 0.31
SMTN-202ENST00000347557 GOLGA8BA8MQT2 603 aa17.01■□□□□ 0.31
SMTN-202ENST00000347557 NBPF26B4DH59 902 aa17.01■□□□□ 0.31
SMTN-202ENST00000347557 ADORA1P30542 326 aa17.01■□□□□ 0.31
SMTN-202ENST00000347557 FOXO4P98177 505 aa17.01■□□□□ 0.31
SMTN-202ENST00000347557 NBPF14Q5TI25 921 aa17.01■□□□□ 0.31
SMTN-202ENST00000347557 NBPF10Q6P3W6 841 aaKnown RBP17.01■□□□□ 0.31
SMTN-202ENST00000347557 NBPF15Q8N660 670 aa17.01■□□□□ 0.31
SMTN-202ENST00000347557 CRYBG1Q9Y4K1 1723 aa17.01■□□□□ 0.31
SMTN-202ENST00000347557 NDUFA8P51970 172 aa17.01■□□□□ 0.31
SMTN-202ENST00000347557 ZMYM1Q5SVZ6 1142 aa17.01■□□□□ 0.31
SMTN-202ENST00000347557 HELLSQ9NRZ9 838 aa17.01■□□□□ 0.31
SMTN-202ENST00000347557 CTAGE5O15320 804 aa17■□□□□ 0.31
SMTN-202ENST00000347557 APPP05067 770 aa17■□□□□ 0.31
SMTN-202ENST00000347557 MARCKSP29966 332 aaPredicted RBP17■□□□□ 0.31
SMTN-202ENST00000347557 STK11IPQ8N1F8 1099 aa17■□□□□ 0.31
SMTN-202ENST00000347557 MRPS27Q92552 414 aaKnown RBP17■□□□□ 0.31
SMTN-202ENST00000347557 ORC3Q9UBD5 711 aaPredicted RBP17■□□□□ 0.31
SMTN-202ENST00000347557 KIF20AO95235 890 aa17■□□□□ 0.31
SMTN-202ENST00000347557 SYNE3Q6ZMZ3 975 aa17■□□□□ 0.31
SMTN-202ENST00000347557 LRP10Q7Z4F1 713 aa17■□□□□ 0.31
SMTN-202ENST00000347557 EXOSC10Q01780 885 aaKnown RBP16.99■□□□□ 0.31
SMTN-202ENST00000347557 ILDR1Q86SU0 546 aaPredicted RBP16.99■□□□□ 0.31
SMTN-202ENST00000347557 TEX2Q8IWB9 1127 aa16.99■□□□□ 0.31
SMTN-202ENST00000347557 DHX40Q8IX18 779 aaKnown RBP16.99■□□□□ 0.31
SMTN-202ENST00000347557 EYA2O00167 538 aa16.99■□□□□ 0.31
SMTN-202ENST00000347557 IL15P40933 162 aaPredicted RBP16.99■□□□□ 0.31
SMTN-202ENST00000347557 GNL2Q13823 731 aaKnown RBP16.99■□□□□ 0.31
SMTN-202ENST00000347557 RALYLQ86SE5 291 aaKnown RBP16.99■□□□□ 0.31
SMTN-202ENST00000347557 SECISBP2LQ93073 1101 aaKnown RBP16.99■□□□□ 0.31
SMTN-202ENST00000347557 DSCC1Q9BVC3 393 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms