RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 LRRC24Q50LG9 513 aa18.83■□□□□ 0.6
SCARB1-202ENST00000339570 AIFM3Q96NN9 605 aa18.83■□□□□ 0.6
SCARB1-202ENST00000339570 ZSCAN16Q9H4T2 348 aaPredicted RBP18.83■□□□□ 0.6
SCARB1-202ENST00000339570 E7EWF7 191 aa18.82■□□□□ 0.6
SCARB1-202ENST00000339570 AMOTQ4VCS5 1084 aa18.82■□□□□ 0.6
SCARB1-202ENST00000339570 FBXO38Q6PIJ6 1188 aa18.82■□□□□ 0.6
SCARB1-202ENST00000339570 CHMP4AQ9BY43 222 aa18.82■□□□□ 0.6
SCARB1-202ENST00000339570 PAXBP1Q9Y5B6 917 aa18.82■□□□□ 0.6
SCARB1-202ENST00000339570 DIP2AQ14689 1571 aa18.82■□□□□ 0.6
SCARB1-202ENST00000339570 NWD1Q149M9 1564 aa18.82■□□□□ 0.6
SCARB1-202ENST00000339570 ATP5JP18859 108 aa18.82■□□□□ 0.6
SCARB1-202ENST00000339570 ADD1P35611 737 aaKnown RBP18.82■□□□□ 0.6
SCARB1-202ENST00000339570 SNW1Q13573 536 aaKnown RBP18.82■□□□□ 0.6
SCARB1-202ENST00000339570 PAG1Q9NWQ8 432 aa18.82■□□□□ 0.6
SCARB1-202ENST00000339570 OGFRQ9NZT2 677 aa18.82■□□□□ 0.6
SCARB1-202ENST00000339570 CPLX1O14810 134 aa18.82■□□□□ 0.6
SCARB1-202ENST00000339570 PI16Q6UXB8 463 aa18.82■□□□□ 0.6
SCARB1-202ENST00000339570 GNL2Q13823 731 aaKnown RBP18.81■□□□□ 0.6
SCARB1-202ENST00000339570 EPC1Q9H2F5 836 aa18.81■□□□□ 0.6
SCARB1-202ENST00000339570 FAM160A1Q05DH4 1040 aa18.81■□□□□ 0.6
SCARB1-202ENST00000339570 SPECC1Q5M775 1068 aa18.81■□□□□ 0.6
SCARB1-202ENST00000339570 KIF18AQ8NI77 898 aa18.81■□□□□ 0.6
SCARB1-202ENST00000339570 ZNF396Q96N95 335 aaPredicted RBP18.81■□□□□ 0.6
SCARB1-202ENST00000339570 METTL22Q9BUU2 404 aaPredicted RBP18.81■□□□□ 0.6
SCARB1-202ENST00000339570 PUS3Q9BZE2 481 aaKnown RBP18.81■□□□□ 0.6
SCARB1-202ENST00000339570 GTPBP4Q9BZE4 634 aaKnown RBP18.81■□□□□ 0.6
SCARB1-202ENST00000339570 IFIT1P09914 478 aaKnown RBP18.8■□□□□ 0.6
SCARB1-202ENST00000339570 ATP1A3P13637 1013 aa18.8■□□□□ 0.6
SCARB1-202ENST00000339570 ATP2B1P20020 1258 aa18.8■□□□□ 0.6
SCARB1-202ENST00000339570 DENND2AQ9ULE3 1009 aa18.8■□□□□ 0.6
SCARB1-202ENST00000339570 CCZ1BP86790 482 aa18.8■□□□□ 0.6
SCARB1-202ENST00000339570 CCZ1P86791 482 aaPredicted RBP18.8■□□□□ 0.6
SCARB1-202ENST00000339570 CCDC82Q8N4S0 544 aa18.8■□□□□ 0.6
SCARB1-202ENST00000339570 GOLGA8BA8MQT2 603 aa18.8■□□□□ 0.6
SCARB1-202ENST00000339570 PDIA3P30101 505 aaKnown RBP18.8■□□□□ 0.6
SCARB1-202ENST00000339570 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.8■□□□□ 0.6
SCARB1-202ENST00000339570 CCAR2Q8N163 923 aaKnown RBP18.8■□□□□ 0.6
SCARB1-202ENST00000339570 MRPS27Q92552 414 aaKnown RBP18.8■□□□□ 0.6
SCARB1-202ENST00000339570 C8orf76Q96K31 380 aa18.8■□□□□ 0.6
SCARB1-202ENST00000339570 KLF18A0A0U1RQI7 1052 aa18.79■□□□□ 0.6
SCARB1-202ENST00000339570 HSPD1P10809 573 aaKnown RBP18.79■□□□□ 0.6
SCARB1-202ENST00000339570 ILDR1Q86SU0 546 aaPredicted RBP18.79■□□□□ 0.6
SCARB1-202ENST00000339570 APPP05067 770 aa18.79■□□□□ 0.6
SCARB1-202ENST00000339570 UTP14CQ5TAP6 766 aaKnown RBP18.79■□□□□ 0.6
SCARB1-202ENST00000339570 PFKFB2O60825 505 aa18.79■□□□□ 0.6
SCARB1-202ENST00000339570 SYNE3Q6ZMZ3 975 aa18.79■□□□□ 0.6
SCARB1-202ENST00000339570 KBTBD3Q8NAB2 608 aa18.79■□□□□ 0.6
SCARB1-202ENST00000339570 KCNH5Q8NCM2 988 aa18.79■□□□□ 0.6
SCARB1-202ENST00000339570 ORC3Q9UBD5 711 aaPredicted RBP18.79■□□□□ 0.6
SCARB1-202ENST00000339570 DNAI1Q9UI46 699 aa18.79■□□□□ 0.6
SCARB1-202ENST00000339570 POLR3GO15318 223 aaPredicted RBP18.78■□□□□ 0.6
SCARB1-202ENST00000339570 RBM43Q6ZSC3 357 aaKnown RBP18.78■□□□□ 0.6
SCARB1-202ENST00000339570 PDILTQ8N807 584 aa18.78■□□□□ 0.6
SCARB1-202ENST00000339570 RCOR1Q9UKL0 485 aa18.78■□□□□ 0.6
SCARB1-202ENST00000339570 M0R2C6 588 aa18.78■□□□□ 0.6
SCARB1-202ENST00000339570 SFPQP23246 707 aaKnown RBP eCLIP18.78■□□□□ 0.62e-6■■□□□ 12.9
SCARB1-202ENST00000339570 PODXL2Q9NZ53 605 aa18.78■□□□□ 0.6
SCARB1-202ENST00000339570 NALCNQ8IZF0 1738 aa18.78■□□□□ 0.6
SCARB1-202ENST00000339570 TTLL7Q6ZT98 887 aa18.77■□□□□ 0.6
SCARB1-202ENST00000339570 SLC3A2P08195 630 aaKnown RBP18.77■□□□□ 0.6
SCARB1-202ENST00000339570 HAUS7Q99871 368 aa18.77■□□□□ 0.6
SCARB1-202ENST00000339570 SERPINC1P01008 464 aa18.77■□□□□ 0.59
SCARB1-202ENST00000339570 NAT10Q9H0A0 1025 aaKnown RBP18.77■□□□□ 0.59
SCARB1-202ENST00000339570 AGLP35573 1532 aa18.76■□□□□ 0.59
SCARB1-202ENST00000339570 MYL10Q9BUA6 226 aa18.76■□□□□ 0.59
SCARB1-202ENST00000339570 DDX41Q9UJV9 622 aaKnown RBP18.76■□□□□ 0.59
SCARB1-202ENST00000339570 FDPSP14324 419 aaKnown RBP18.76■□□□□ 0.59
SCARB1-202ENST00000339570 CFAP100Q494V2 611 aa18.76■□□□□ 0.59
SCARB1-202ENST00000339570 MRFAP1L1Q96HT8 127 aa18.76■□□□□ 0.59
SCARB1-202ENST00000339570 ZSWIM4Q9H7M6 989 aa18.76■□□□□ 0.59
SCARB1-202ENST00000339570 UBE2Q2LH0YL09 131 aa18.76■□□□□ 0.59
SCARB1-202ENST00000339570 URI1O94763 535 aaPredicted RBP18.76■□□□□ 0.59
SCARB1-202ENST00000339570 ADORA1P30542 326 aa18.76■□□□□ 0.59
SCARB1-202ENST00000339570 RFX5P48382 616 aaPredicted RBP18.76■□□□□ 0.59
SCARB1-202ENST00000339570 USPL1Q5W0Q7 1092 aa18.76■□□□□ 0.59
SCARB1-202ENST00000339570 NBPF11Q86T75 865 aa18.76■□□□□ 0.59
SCARB1-202ENST00000339570 OSBP2Q969R2 916 aa18.76■□□□□ 0.59
SCARB1-202ENST00000339570 FEZ1Q99689 392 aa18.76■□□□□ 0.59
SCARB1-202ENST00000339570 MAST3O60307 1309 aa18.75■□□□□ 0.59
SCARB1-202ENST00000339570 SLU7O95391 586 aaKnown RBP18.75■□□□□ 0.59
SCARB1-202ENST00000339570 A1BGP04217 495 aa18.75■□□□□ 0.59
SCARB1-202ENST00000339570 ARMCX5Q6P1M9 558 aa18.75■□□□□ 0.59
SCARB1-202ENST00000339570 ARHGEF25Q86VW2 580 aa18.75■□□□□ 0.59
SCARB1-202ENST00000339570 PHKBQ93100 1093 aa18.75■□□□□ 0.59
SCARB1-202ENST00000339570 COPRSQ9NQ92 184 aa18.75■□□□□ 0.59
SCARB1-202ENST00000339570 CLIC6Q96NY7 704 aa18.75■□□□□ 0.59
SCARB1-202ENST00000339570 SLC52A2Q9HAB3 445 aa18.75■□□□□ 0.59
SCARB1-202ENST00000339570 CACNA1FO60840 1977 aa18.75■□□□□ 0.59
SCARB1-202ENST00000339570 CARMIL3Q8ND23 1372 aa18.75■□□□□ 0.59
SCARB1-202ENST00000339570 E4F1Q66K89 784 aaPredicted RBP18.74■□□□□ 0.59
SCARB1-202ENST00000339570 ZNF397Q8NF99 534 aaPredicted RBP18.74■□□□□ 0.59
SCARB1-202ENST00000339570 SMARCC2Q8TAQ2 1214 aa18.74■□□□□ 0.59
SCARB1-202ENST00000339570 INCENPQ9NQS7 918 aa18.74■□□□□ 0.59
SCARB1-202ENST00000339570 A0A1B0GUL7 405 aa18.74■□□□□ 0.59
SCARB1-202ENST00000339570 KIF28PB7ZC32 967 aa18.74■□□□□ 0.59
SCARB1-202ENST00000339570 SPTLC2O15270 562 aa18.74■□□□□ 0.59
SCARB1-202ENST00000339570 CTAGE5O15320 804 aa18.74■□□□□ 0.59
SCARB1-202ENST00000339570 PRC1O43663 620 aa18.74■□□□□ 0.59
SCARB1-202ENST00000339570 ZNF202O95125 648 aa18.74■□□□□ 0.59
SCARB1-202ENST00000339570 ARHGAP29Q52LW3 1261 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms