RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 PGBD1Q96JS3 809 aa11.89□□□□□ -0.51
HIF1A-202ENST00000337138 CBX8Q9HC52 389 aa11.89□□□□□ -0.51
HIF1A-202ENST00000337138 SH2B1Q9NRF2 756 aaPredicted RBP11.89□□□□□ -0.51
HIF1A-202ENST00000337138 COL4A1P02462 1669 aa11.89□□□□□ -0.51
HIF1A-202ENST00000337138 ME1P48163 572 aa11.89□□□□□ -0.51
HIF1A-202ENST00000337138 NEURL1BA8MQ27 555 aa11.89□□□□□ -0.51
HIF1A-202ENST00000337138 BIN1O00499 593 aa11.89□□□□□ -0.51
HIF1A-202ENST00000337138 PDCP20941 246 aa11.89□□□□□ -0.51
HIF1A-202ENST00000337138 PLA2G4DQ86XP0 818 aa11.89□□□□□ -0.51
HIF1A-202ENST00000337138 FAM200AQ8TCP9 573 aa11.89□□□□□ -0.51
HIF1A-202ENST00000337138 PTPN12Q05209 780 aaKnown RBP11.88□□□□□ -0.51
HIF1A-202ENST00000337138 ARID5BQ14865 1188 aa11.88□□□□□ -0.51
HIF1A-202ENST00000337138 GORABQ5T7V8 394 aa11.88□□□□□ -0.51
HIF1A-202ENST00000337138 CCDC112Q8NEF3 446 aa11.88□□□□□ -0.51
HIF1A-202ENST00000337138 LINS1Q8NG48 757 aa11.88□□□□□ -0.51
HIF1A-202ENST00000337138 SDF4Q9BRK5 362 aa11.88□□□□□ -0.51
HIF1A-202ENST00000337138 NCOA5Q9HCD5 579 aaKnown RBP11.88□□□□□ -0.51
HIF1A-202ENST00000337138 STRCQ7RTU9 1775 aa11.88□□□□□ -0.51
HIF1A-202ENST00000337138 DDX58O95786 925 aaKnown RBP11.88□□□□□ -0.51
HIF1A-202ENST00000337138 GCP02774 474 aa11.88□□□□□ -0.51
HIF1A-202ENST00000337138 Q6ZUG5 572 aa11.88□□□□□ -0.51
HIF1A-202ENST00000337138 STOX1Q6ZVD7 989 aa11.88□□□□□ -0.51
HIF1A-202ENST00000337138 UBE3BQ7Z3V4 1068 aa11.88□□□□□ -0.51
HIF1A-202ENST00000337138 COPRSQ9NQ92 184 aa11.88□□□□□ -0.51
HIF1A-202ENST00000337138 DDX21Q9NR30 783 aaKnown RBP eCLIP11.88□□□□□ -0.51
HIF1A-202ENST00000337138 GRM8O00222 908 aa11.88□□□□□ -0.51
HIF1A-202ENST00000337138 ROBO1Q9Y6N7 1651 aa11.87□□□□□ -0.51
HIF1A-202ENST00000337138 CCDC66A2RUB6 948 aa11.87□□□□□ -0.51
HIF1A-202ENST00000337138 PRIMPOLQ96LW4 560 aa11.87□□□□□ -0.51
HIF1A-202ENST00000337138 EVCP57679 992 aa11.87□□□□□ -0.51
HIF1A-202ENST00000337138 ATP2B3Q16720 1220 aa11.87□□□□□ -0.51
HIF1A-202ENST00000337138 HSP90AB3PQ58FF7 597 aa11.87□□□□□ -0.51
HIF1A-202ENST00000337138 OTUD7BQ6GQQ9 843 aa11.87□□□□□ -0.51
HIF1A-202ENST00000337138 COPS6Q7L5N1 327 aa11.87□□□□□ -0.51
HIF1A-202ENST00000337138 ERC1Q8IUD2 1116 aa11.87□□□□□ -0.51
HIF1A-202ENST00000337138 DCCP43146 1447 aa11.87□□□□□ -0.51
HIF1A-202ENST00000337138 RPS6KB1P23443 525 aa11.87□□□□□ -0.51
HIF1A-202ENST00000337138 HAND2P61296 217 aa11.87□□□□□ -0.51
HIF1A-202ENST00000337138 RESTQ13127 1097 aa11.87□□□□□ -0.51
HIF1A-202ENST00000337138 XAGE3Q8WTP9 111 aa11.87□□□□□ -0.51
HIF1A-202ENST00000337138 DBNLQ9UJU6 430 aaKnown RBP11.87□□□□□ -0.51
HIF1A-202ENST00000337138 NRDCO43847 1150 aa11.86□□□□□ -0.51
HIF1A-202ENST00000337138 ATF3P18847 181 aa11.86□□□□□ -0.51
HIF1A-202ENST00000337138 FOXO4P98177 505 aa11.86□□□□□ -0.51
HIF1A-202ENST00000337138 SNW1Q13573 536 aaKnown RBP11.86□□□□□ -0.51
HIF1A-202ENST00000337138 AMOTQ4VCS5 1084 aa11.86□□□□□ -0.51
HIF1A-202ENST00000337138 CCAR2Q8N163 923 aaKnown RBP11.86□□□□□ -0.51
HIF1A-202ENST00000337138 USP16Q9Y5T5 823 aa11.86□□□□□ -0.51
HIF1A-202ENST00000337138 EXOSC10Q01780 885 aaKnown RBP11.86□□□□□ -0.51
HIF1A-202ENST00000337138 CCDC73Q6ZRK6 1079 aa11.86□□□□□ -0.51
HIF1A-202ENST00000337138 LEO1Q8WVC0 666 aaPredicted RBP11.86□□□□□ -0.51
HIF1A-202ENST00000337138 ANKRD7Q92527 254 aa11.86□□□□□ -0.51
HIF1A-202ENST00000337138 POLR3DP05423 398 aaPredicted RBP11.86□□□□□ -0.51
HIF1A-202ENST00000337138 APOBRQ0VD83 1088 aa11.86□□□□□ -0.51
HIF1A-202ENST00000337138 ATG9AQ7Z3C6 839 aa11.86□□□□□ -0.51
HIF1A-202ENST00000337138 KCNH5Q8NCM2 988 aa11.86□□□□□ -0.51
HIF1A-202ENST00000337138 SCAND2PQ9GZW5 306 aaPredicted RBP11.86□□□□□ -0.51
HIF1A-202ENST00000337138 KCND1Q9NSA2 647 aa11.86□□□□□ -0.51
HIF1A-202ENST00000337138 GOLIM4O00461 696 aa11.85□□□□□ -0.51
HIF1A-202ENST00000337138 TFCP2Q12800 502 aa11.85□□□□□ -0.51
HIF1A-202ENST00000337138 GCKRQ14397 625 aa11.85□□□□□ -0.51
HIF1A-202ENST00000337138 NEK1Q96PY6 1258 aa11.85□□□□□ -0.51
HIF1A-202ENST00000337138 ORAI2Q96SN7 254 aa11.85□□□□□ -0.51
HIF1A-202ENST00000337138 SMC2O95347 1197 aa11.85□□□□□ -0.51
HIF1A-202ENST00000337138 A0A0G2JLW4 131 aa11.85□□□□□ -0.51
HIF1A-202ENST00000337138 KINO60870 393 aaKnown RBP11.85□□□□□ -0.51
HIF1A-202ENST00000337138 FKBP4Q02790 459 aaKnown RBP eCLIP11.85□□□□□ -0.51
HIF1A-202ENST00000337138 GNL2Q13823 731 aaKnown RBP11.85□□□□□ -0.51
HIF1A-202ENST00000337138 IQCB1Q15051 598 aa11.85□□□□□ -0.51
HIF1A-202ENST00000337138 WASHC4Q2M389 1173 aa11.85□□□□□ -0.51
HIF1A-202ENST00000337138 FAM177A1Q8N128 213 aaPredicted RBP11.85□□□□□ -0.51
HIF1A-202ENST00000337138 ENGASEQ8NFI3 743 aa11.85□□□□□ -0.51
HIF1A-202ENST00000337138 NKX2-3Q8TAU0 364 aa11.85□□□□□ -0.51
HIF1A-202ENST00000337138 FAM53CQ9NYF3 392 aa11.85□□□□□ -0.51
HIF1A-202ENST00000337138 CPDO75976 1380 aa11.85□□□□□ -0.51
HIF1A-202ENST00000337138 CARMIL3Q8ND23 1372 aa11.84□□□□□ -0.51
HIF1A-202ENST00000337138 ATP5JP18859 108 aa11.84□□□□□ -0.51
HIF1A-202ENST00000337138 HSP90AA4PQ58FG1 418 aa11.84□□□□□ -0.51
HIF1A-202ENST00000337138 CCAR1Q8IX12 1150 aaKnown RBP11.84□□□□□ -0.51
HIF1A-202ENST00000337138 DBNDD2Q9BQY9 259 aa11.84□□□□□ -0.51
HIF1A-202ENST00000337138 KIAA1551Q9HCM1 1747 aa11.84□□□□□ -0.51
HIF1A-202ENST00000337138 NPHP3Q7Z494 1330 aa11.84□□□□□ -0.51
HIF1A-202ENST00000337138 NFATC2IPQ8NCF5 419 aa11.84□□□□□ -0.51
HIF1A-202ENST00000337138 TIMM10P62072 90 aa11.84□□□□□ -0.51
HIF1A-202ENST00000337138 PTPN21Q16825 1174 aa11.84□□□□□ -0.51
HIF1A-202ENST00000337138 TTC5Q8N0Z6 440 aa11.84□□□□□ -0.51
HIF1A-202ENST00000337138 TMX1Q9H3N1 280 aa11.84□□□□□ -0.51
HIF1A-202ENST00000337138 SLC52A2Q9HAB3 445 aa11.84□□□□□ -0.51
HIF1A-202ENST00000337138 SH3TC1Q8TE82 1336 aa11.83□□□□□ -0.51
HIF1A-202ENST00000337138 ANKRD1Q15327 319 aa11.83□□□□□ -0.52
HIF1A-202ENST00000337138 ZNF790Q6PG37 636 aa11.83□□□□□ -0.52
HIF1A-202ENST00000337138 HOMER1Q86YM7 354 aa11.83□□□□□ -0.52
HIF1A-202ENST00000337138 GTPBP4Q9BZE4 634 aaKnown RBP11.83□□□□□ -0.52
HIF1A-202ENST00000337138 A0A087WZG4 1122 aa11.83□□□□□ -0.52
HIF1A-202ENST00000337138 PHKG2P15735 406 aa11.83□□□□□ -0.52
HIF1A-202ENST00000337138 DMTNQ08495 405 aa11.83□□□□□ -0.52
HIF1A-202ENST00000337138 TICAM2Q86XR7 235 aa11.83□□□□□ -0.52
HIF1A-202ENST00000337138 ANKRD24Q8TF21 1146 aa11.83□□□□□ -0.52
HIF1A-202ENST00000337138 RAPGEF4Q8WZA2 1011 aa11.83□□□□□ -0.52
HIF1A-202ENST00000337138 GTF3C6Q969F1 213 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms