RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 TXNRD3Q86VQ6 643 aa14.25□□□□□ -0.13
MRPL55-203ENST00000336520 ANKRD44Q8N8A2 993 aa14.25□□□□□ -0.13
MRPL55-203ENST00000336520 AGBL3Q8NEM8 1001 aa14.25□□□□□ -0.13
MRPL55-203ENST00000336520 ZC3H15Q8WU90 426 aaKnown RBP14.25□□□□□ -0.13
MRPL55-203ENST00000336520 SNAP23O00161 211 aa14.24□□□□□ -0.13
MRPL55-203ENST00000336520 TRAF5O00463 557 aa14.24□□□□□ -0.13
MRPL55-203ENST00000336520 IPO8O15397 1037 aaKnown RBP14.24□□□□□ -0.13
MRPL55-203ENST00000336520 UBTFL1P0CB47 393 aaPredicted RBP14.24□□□□□ -0.13
MRPL55-203ENST00000336520 KIF4BQ2VIQ3 1234 aa14.24□□□□□ -0.13
MRPL55-203ENST00000336520 FRAT1Q92837 279 aaPredicted RBP14.24□□□□□ -0.13
MRPL55-203ENST00000336520 MKRN1Q9UHC7 482 aaKnown RBP14.24□□□□□ -0.13
MRPL55-203ENST00000336520 ZBED9Q6R2W3 1325 aa14.23□□□□□ -0.13
MRPL55-203ENST00000336520 PSME4Q14997 1843 aa14.23□□□□□ -0.13
MRPL55-203ENST00000336520 USP17L8P0C7I0 530 aa14.23□□□□□ -0.13
MRPL55-203ENST00000336520 ZNF804AQ7Z570 1209 aa14.23□□□□□ -0.13
MRPL55-203ENST00000336520 ARHGAP45Q92619 1136 aa14.23□□□□□ -0.13
MRPL55-203ENST00000336520 GLIS2Q9BZE0 524 aaPredicted RBP14.23□□□□□ -0.13
MRPL55-203ENST00000336520 PUS3Q9BZE2 481 aaKnown RBP14.23□□□□□ -0.13
MRPL55-203ENST00000336520 ABT1Q9ULW3 272 aaKnown RBP14.23□□□□□ -0.13
MRPL55-203ENST00000336520 A0A1B0GUL6 1792 aa14.23□□□□□ -0.13
MRPL55-203ENST00000336520 ZNF609O15014 1411 aa14.23□□□□□ -0.13
MRPL55-203ENST00000336520 EGFRP00533 1210 aa14.22□□□□□ -0.13
MRPL55-203ENST00000336520 FMR1Q06787 632 aaKnown RBP eCLIP14.22□□□□□ -0.13
MRPL55-203ENST00000336520 DACT2Q5SW24 774 aa14.22□□□□□ -0.13
MRPL55-203ENST00000336520 STRIP1Q5VSL9 837 aa14.22□□□□□ -0.13
MRPL55-203ENST00000336520 PGAP2Q9UHJ9 254 aa14.22□□□□□ -0.13
MRPL55-203ENST00000336520 HDAC5Q9UQL6 1122 aa14.22□□□□□ -0.13
MRPL55-203ENST00000336520 MROH5Q6ZUA9 1318 aa14.21□□□□□ -0.13
MRPL55-203ENST00000336520 MYO3BQ8WXR4 1341 aa14.21□□□□□ -0.13
MRPL55-203ENST00000336520 BCAR3O75815 825 aa14.21□□□□□ -0.13
MRPL55-203ENST00000336520 ZNF280AP59817 542 aaPredicted RBP14.21□□□□□ -0.13
MRPL55-203ENST00000336520 GTF2IP78347 998 aa14.21□□□□□ -0.13
MRPL55-203ENST00000336520 METTL24Q5JXM2 366 aa14.21□□□□□ -0.13
MRPL55-203ENST00000336520 TTLL5Q6EMB2 1281 aa14.21□□□□□ -0.13
MRPL55-203ENST00000336520 C15orf52Q6ZUT6 534 aaKnown RBP14.21□□□□□ -0.13
MRPL55-203ENST00000336520 CDC37L1Q7L3B6 337 aa14.21□□□□□ -0.13
MRPL55-203ENST00000336520 OGFOD1Q8N543 542 aa14.21□□□□□ -0.13
MRPL55-203ENST00000336520 JMYQ8N9B5 988 aa14.21□□□□□ -0.13
MRPL55-203ENST00000336520 DCPSQ96C86 337 aaKnown RBP14.21□□□□□ -0.13
MRPL55-203ENST00000336520 GMLQ99445 158 aa14.21□□□□□ -0.13
MRPL55-203ENST00000336520 MXD3Q9BW11 206 aa14.21□□□□□ -0.13
MRPL55-203ENST00000336520 CD209Q9NNX6 404 aa14.21□□□□□ -0.13
MRPL55-203ENST00000336520 RIPOR2Q9Y4F9 1068 aa14.21□□□□□ -0.13
MRPL55-203ENST00000336520 CNTNAP1P78357 1384 aa14.21□□□□□ -0.14
MRPL55-203ENST00000336520 TRIM27P14373 513 aa14.2□□□□□ -0.14
MRPL55-203ENST00000336520 UBE4AQ14139 1066 aa14.2□□□□□ -0.14
MRPL55-203ENST00000336520 INTS3Q68E01 1043 aaKnown RBP14.2□□□□□ -0.14
MRPL55-203ENST00000336520 ATF7IPQ6VMQ6 1270 aa14.2□□□□□ -0.14
MRPL55-203ENST00000336520 KRT26Q7Z3Y9 468 aa14.2□□□□□ -0.14
MRPL55-203ENST00000336520 USP48Q86UV5 1035 aa14.2□□□□□ -0.14
MRPL55-203ENST00000336520 KLHDC4Q8TBB5 520 aa14.2□□□□□ -0.14
MRPL55-203ENST00000336520 ZNF408Q9H9D4 720 aa14.2□□□□□ -0.14
MRPL55-203ENST00000336520 MYOZ2Q9NPC6 264 aa14.2□□□□□ -0.14
MRPL55-203ENST00000336520 GGA3Q9NZ52 723 aa14.2□□□□□ -0.14
MRPL55-203ENST00000336520 LRRFIP2Q9Y608 721 aaKnown RBP14.2□□□□□ -0.14
MRPL55-203ENST00000336520 IRS2Q9Y4H2 1338 aa14.19□□□□□ -0.14
MRPL55-203ENST00000336520 CELF2O95319 508 aaKnown RBP14.19□□□□□ -0.14
MRPL55-203ENST00000336520 LRRC24Q50LG9 513 aa14.19□□□□□ -0.14
MRPL55-203ENST00000336520 CLUAP1Q96AJ1 413 aa14.19□□□□□ -0.14
MRPL55-203ENST00000336520 MEIS3Q99687 375 aa14.19□□□□□ -0.14
MRPL55-203ENST00000336520 TRPM7Q96QT4 1865 aa14.18□□□□□ -0.14
MRPL55-203ENST00000336520 GNAI3P08754 354 aa14.18□□□□□ -0.14
MRPL55-203ENST00000336520 SCARF1Q14162 830 aa14.18□□□□□ -0.14
MRPL55-203ENST00000336520 ZKSCAN2Q63HK3 967 aa14.18□□□□□ -0.14
MRPL55-203ENST00000336520 PAXIP1Q6ZW49 1069 aaPredicted RBP14.18□□□□□ -0.14
MRPL55-203ENST00000336520 KIAA0825Q8IV33 1275 aa14.18□□□□□ -0.14
MRPL55-203ENST00000336520 SULF1Q8IWU6 871 aa14.18□□□□□ -0.14
MRPL55-203ENST00000336520 HDAC9Q9UKV0 1011 aa14.18□□□□□ -0.14
MRPL55-203ENST00000336520 ASTN2O75129 1339 aaPredicted RBP14.17□□□□□ -0.14
MRPL55-203ENST00000336520 RASSF10A6NK89 507 aa14.17□□□□□ -0.14
MRPL55-203ENST00000336520 ADM5C9JUS6 153 aa14.17□□□□□ -0.14
MRPL55-203ENST00000336520 EYA2O00167 538 aa14.17□□□□□ -0.14
MRPL55-203ENST00000336520 IL1R1P14778 569 aa14.17□□□□□ -0.14
MRPL55-203ENST00000336520 HIBADHP31937 336 aaKnown RBP14.17□□□□□ -0.14
MRPL55-203ENST00000336520 GYG1P46976 350 aa14.17□□□□□ -0.14
MRPL55-203ENST00000336520 DEFB115Q30KQ5 88 aa14.17□□□□□ -0.14
MRPL55-203ENST00000336520 ANGEL2Q5VTE6 544 aaKnown RBP14.17□□□□□ -0.14
MRPL55-203ENST00000336520 CST9Q5W186 159 aa14.17□□□□□ -0.14
MRPL55-203ENST00000336520 VPS37DQ86XT2 251 aa14.17□□□□□ -0.14
MRPL55-203ENST00000336520 TNNQ9UQP3 1299 aa14.17□□□□□ -0.14
MRPL55-203ENST00000336520 JAG2Q9Y219 1238 aa14.17□□□□□ -0.14
MRPL55-203ENST00000336520 ZNF646O15015 1829 aaPredicted RBP14.16□□□□□ -0.14
MRPL55-203ENST00000336520 PDE8BO95263 885 aa14.16□□□□□ -0.14
MRPL55-203ENST00000336520 RFX5P48382 616 aaPredicted RBP14.16□□□□□ -0.14
MRPL55-203ENST00000336520 VEGFBP49765 207 aa14.16□□□□□ -0.14
MRPL55-203ENST00000336520 PTPN12Q05209 780 aaKnown RBP14.16□□□□□ -0.14
MRPL55-203ENST00000336520 SIL1Q9H173 461 aa14.16□□□□□ -0.14
MRPL55-203ENST00000336520 SASH1O94885 1247 aa14.15□□□□□ -0.14
MRPL55-203ENST00000336520 MMP14P50281 582 aa14.15□□□□□ -0.14
MRPL55-203ENST00000336520 GRM1Q13255 1194 aa14.15□□□□□ -0.14
MRPL55-203ENST00000336520 PUM3Q15397 648 aaKnown RBP14.15□□□□□ -0.14
MRPL55-203ENST00000336520 CAVIN4Q5BKX8 364 aa14.15□□□□□ -0.14
MRPL55-203ENST00000336520 DLK2Q6UY11 383 aa14.15□□□□□ -0.14
MRPL55-203ENST00000336520 FTSJ3Q8IY81 847 aaKnown RBP14.15□□□□□ -0.14
MRPL55-203ENST00000336520 VGLL2Q8N8G2 317 aa14.15□□□□□ -0.14
MRPL55-203ENST00000336520 FAM84BQ96KN1 310 aaPredicted RBP14.15□□□□□ -0.14
MRPL55-203ENST00000336520 TLL2Q9Y6L7 1015 aa14.15□□□□□ -0.14
MRPL55-203ENST00000336520 F8W031 263 aaPredicted RBP14.14□□□□□ -0.15
MRPL55-203ENST00000336520 FRAT2O75474 233 aaPredicted RBP14.14□□□□□ -0.15
MRPL55-203ENST00000336520 IFIT1P09914 478 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms