RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 RXRAP19793 462 aa11.1□□□□□ -0.63
SS18L1-201ENST00000331758 SSRP1Q08945 709 aaKnown RBP11.1□□□□□ -0.63
SS18L1-201ENST00000331758 PUM3Q15397 648 aaKnown RBP11.1□□□□□ -0.63
SS18L1-201ENST00000331758 ZSCAN23Q3MJ62 389 aa11.1□□□□□ -0.63
SS18L1-201ENST00000331758 ZBTB38Q8NAP3 1195 aaPredicted RBP11.1□□□□□ -0.63
SS18L1-201ENST00000331758 HELLSQ9NRZ9 838 aa11.1□□□□□ -0.63
SS18L1-201ENST00000331758 ESPNB1AK53 854 aa11.09□□□□□ -0.63
SS18L1-201ENST00000331758 TXLNAP40222 546 aa11.09□□□□□ -0.63
SS18L1-201ENST00000331758 ST5P78524 1137 aa11.09□□□□□ -0.63
SS18L1-201ENST00000331758 TRAPPC3LQ5T215 181 aa11.09□□□□□ -0.63
SS18L1-201ENST00000331758 GIGYF2Q6Y7W6 1299 aaKnown RBP11.09□□□□□ -0.63
SS18L1-201ENST00000331758 MTERF4Q7Z6M4 381 aaKnown RBP11.09□□□□□ -0.63
SS18L1-201ENST00000331758 HOMER1Q86YM7 354 aa11.09□□□□□ -0.63
SS18L1-201ENST00000331758 ARHGEF28Q8N1W1 1705 aaKnown RBP11.09□□□□□ -0.63
SS18L1-201ENST00000331758 MBD4O95243 580 aa11.09□□□□□ -0.63
SS18L1-201ENST00000331758 WTAPQ15007 396 aa11.09□□□□□ -0.63
SS18L1-201ENST00000331758 CATIPQ7Z7H3 387 aa11.09□□□□□ -0.63
SS18L1-201ENST00000331758 PDILTQ8N807 584 aa11.09□□□□□ -0.63
SS18L1-201ENST00000331758 TFCP2L1Q9NZI6 479 aa11.09□□□□□ -0.63
SS18L1-201ENST00000331758 MAP3K15Q6ZN16 1313 aa11.09□□□□□ -0.63
SS18L1-201ENST00000331758 MPHOSPH10O00566 681 aaKnown RBP11.09□□□□□ -0.63
SS18L1-201ENST00000331758 GPAA1O43292 621 aa11.09□□□□□ -0.63
SS18L1-201ENST00000331758 PCCAP05165 728 aaPredicted RBP11.09□□□□□ -0.63
SS18L1-201ENST00000331758 EPHA10Q5JZY3 1008 aa11.09□□□□□ -0.63
SS18L1-201ENST00000331758 GIMAP6Q6P9H5 292 aa11.09□□□□□ -0.63
SS18L1-201ENST00000331758 FSIP1Q8NA03 581 aa11.09□□□□□ -0.63
SS18L1-201ENST00000331758 SASH1O94885 1247 aa11.09□□□□□ -0.63
SS18L1-201ENST00000331758 LDHCP07864 332 aa11.09□□□□□ -0.63
SS18L1-201ENST00000331758 RPS6KB1P23443 525 aa11.09□□□□□ -0.63
SS18L1-201ENST00000331758 CTSWP56202 376 aa11.09□□□□□ -0.63
SS18L1-201ENST00000331758 FAM173BQ6P4H8 233 aa11.09□□□□□ -0.63
SS18L1-201ENST00000331758 APPBP2Q92624 585 aa11.09□□□□□ -0.63
SS18L1-201ENST00000331758 CRNKL1Q9BZJ0 848 aaKnown RBP11.09□□□□□ -0.63
SS18L1-201ENST00000331758 TNS3Q68CZ2 1445 aa11.08□□□□□ -0.64
SS18L1-201ENST00000331758 BAG3O95817 575 aa11.08□□□□□ -0.64
SS18L1-201ENST00000331758 CEP57L1Q8IYX8 460 aa11.08□□□□□ -0.64
SS18L1-201ENST00000331758 PKNOX2Q96KN3 472 aa11.08□□□□□ -0.64
SS18L1-201ENST00000331758 GREM2Q9H772 168 aa11.08□□□□□ -0.64
SS18L1-201ENST00000331758 ZNF287Q9HBT7 754 aa11.08□□□□□ -0.64
SS18L1-201ENST00000331758 USP25Q9UHP3 1055 aa11.08□□□□□ -0.64
SS18L1-201ENST00000331758 STX8Q9UNK0 236 aa11.08□□□□□ -0.64
SS18L1-201ENST00000331758 F8W031 263 aaPredicted RBP11.08□□□□□ -0.64
SS18L1-201ENST00000331758 RRP9O43818 475 aaKnown RBP11.08□□□□□ -0.64
SS18L1-201ENST00000331758 POLA2Q14181 598 aa11.08□□□□□ -0.64
SS18L1-201ENST00000331758 RASEFQ8IZ41 740 aa11.08□□□□□ -0.64
SS18L1-201ENST00000331758 HMGB2P26583 209 aaKnown RBP11.08□□□□□ -0.64
SS18L1-201ENST00000331758 SPTY2D1Q68D10 685 aaPredicted RBP11.08□□□□□ -0.64
SS18L1-201ENST00000331758 FILIP1Q7Z7B0 1213 aa11.08□□□□□ -0.64
SS18L1-201ENST00000331758 LPIN2Q92539 896 aa11.08□□□□□ -0.64
SS18L1-201ENST00000331758 XRCC6P12956 609 aaKnown RBP eCLIP11.07□□□□□ -0.64
SS18L1-201ENST00000331758 PTPN12Q05209 780 aaKnown RBP11.07□□□□□ -0.64
SS18L1-201ENST00000331758 TCEAL9Q9UHQ7 104 aa11.07□□□□□ -0.64
SS18L1-201ENST00000331758 MAGEB6P1A0A0J9YX57 407 aa11.07□□□□□ -0.64
SS18L1-201ENST00000331758 PTPDC1A2A3K4 754 aa11.07□□□□□ -0.64
SS18L1-201ENST00000331758 CRKLP46109 303 aaKnown RBP11.07□□□□□ -0.64
SS18L1-201ENST00000331758 PDE4BQ07343 736 aa11.07□□□□□ -0.64
SS18L1-201ENST00000331758 CRACR2BQ8N4Y2 399 aaPredicted RBP11.07□□□□□ -0.64
SS18L1-201ENST00000331758 ESR2Q92731 530 aa11.07□□□□□ -0.64
SS18L1-201ENST00000331758 ALG1Q9BT22 464 aa11.07□□□□□ -0.64
SS18L1-201ENST00000331758 NCOA5Q9HCD5 579 aaKnown RBP11.07□□□□□ -0.64
SS18L1-201ENST00000331758 SERPINC1P01008 464 aa11.07□□□□□ -0.64
SS18L1-201ENST00000331758 PKP1Q13835 747 aa11.07□□□□□ -0.64
SS18L1-201ENST00000331758 CCAR2Q8N163 923 aaKnown RBP11.07□□□□□ -0.64
SS18L1-201ENST00000331758 ZKSCAN3Q9BRR0 538 aa11.07□□□□□ -0.64
SS18L1-201ENST00000331758 KRT23Q9C075 422 aa11.07□□□□□ -0.64
SS18L1-201ENST00000331758 ZSCAN16Q9H4T2 348 aaPredicted RBP11.07□□□□□ -0.64
SS18L1-201ENST00000331758 CNBD1Q8NA66 436 aa11.07□□□□□ -0.64
SS18L1-201ENST00000331758 ARMT1Q9H993 441 aa11.07□□□□□ -0.64
SS18L1-201ENST00000331758 B4E1Z4 1266 aa11.06□□□□□ -0.64
SS18L1-201ENST00000331758 NCAPD2Q15021 1401 aa11.06□□□□□ -0.64
SS18L1-201ENST00000331758 ADORA1P30542 326 aa11.06□□□□□ -0.64
SS18L1-201ENST00000331758 CDK5RAP3Q96JB5 506 aa11.06□□□□□ -0.64
SS18L1-201ENST00000331758 BIN1O00499 593 aa11.06□□□□□ -0.64
SS18L1-201ENST00000331758 CNNM2Q9H8M5 875 aa11.06□□□□□ -0.64
SS18L1-201ENST00000331758 DDX19AQ9NUU7 478 aaKnown RBP11.06□□□□□ -0.64
SS18L1-201ENST00000331758 CEP170BQ9Y4F5 1589 aaPredicted RBP11.06□□□□□ -0.64
SS18L1-201ENST00000331758 MAP2P11137 1827 aaKnown RBP11.06□□□□□ -0.64
SS18L1-201ENST00000331758 NLRP5P59047 1200 aa11.05□□□□□ -0.64
SS18L1-201ENST00000331758 CCAR1Q8IX12 1150 aaKnown RBP11.05□□□□□ -0.64
SS18L1-201ENST00000331758 HAUS7Q99871 368 aa11.05□□□□□ -0.64
SS18L1-201ENST00000331758 VAT1LQ9HCJ6 419 aa11.05□□□□□ -0.64
SS18L1-201ENST00000331758 IL6STP40189 918 aaPredicted RBP11.05□□□□□ -0.64
SS18L1-201ENST00000331758 TTLL5Q6EMB2 1281 aa11.05□□□□□ -0.64
SS18L1-201ENST00000331758 CHAMP1Q96JM3 812 aa11.05□□□□□ -0.64
SS18L1-201ENST00000331758 DACT1Q9NYF0 836 aa11.05□□□□□ -0.64
SS18L1-201ENST00000331758 PODXL2Q9NZ53 605 aa11.05□□□□□ -0.64
SS18L1-201ENST00000331758 WWC3Q9ULE0 1092 aa11.05□□□□□ -0.64
SS18L1-201ENST00000331758 RTN1Q16799 776 aa11.05□□□□□ -0.64
SS18L1-201ENST00000331758 ADCK5Q3MIX3 580 aa11.05□□□□□ -0.64
SS18L1-201ENST00000331758 SLF2Q8IX21 1173 aa11.05□□□□□ -0.64
SS18L1-201ENST00000331758 RRAGDQ9NQL2 400 aaPredicted RBP11.05□□□□□ -0.64
SS18L1-201ENST00000331758 ZNF532Q9HCE3 1301 aa11.05□□□□□ -0.64
SS18L1-201ENST00000331758 IFIT1BQ5T764 474 aaKnown RBP11.05□□□□□ -0.64
SS18L1-201ENST00000331758 PI4K2BQ8TCG2 481 aa11.05□□□□□ -0.64
SS18L1-201ENST00000331758 LSG1Q9H089 658 aaKnown RBP11.05□□□□□ -0.64
SS18L1-201ENST00000331758 MCM9Q9NXL9 1143 aa11.05□□□□□ -0.64
SS18L1-201ENST00000331758 TMOD2Q9NZR1 351 aa11.05□□□□□ -0.64
SS18L1-201ENST00000331758 ADCY9O60503 1353 aa11.05□□□□□ -0.64
SS18L1-201ENST00000331758 NRKQ7Z2Y5 1582 aa11.05□□□□□ -0.64
SS18L1-201ENST00000331758 KAT14Q9H8E8 782 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms