RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 TAF1P21675 1872 aa11.57□□□□□ -0.56
C11orf54-201ENST00000331239 A0A1B0GUL7 405 aa11.57□□□□□ -0.56
C11orf54-201ENST00000331239 NFKBIBQ15653 356 aa11.57□□□□□ -0.56
C11orf54-201ENST00000331239 CCDC158Q5M9N0 1113 aa11.57□□□□□ -0.56
C11orf54-201ENST00000331239 GNL3LQ9NVN8 582 aaKnown RBP11.57□□□□□ -0.56
C11orf54-201ENST00000331239 KCNA3P22001 575 aa11.56□□□□□ -0.56
C11orf54-201ENST00000331239 EYA3Q99504 573 aa11.56□□□□□ -0.56
C11orf54-201ENST00000331239 MED23Q9ULK4 1368 aa11.56□□□□□ -0.56
C11orf54-201ENST00000331239 ZNF804BA4D1E1 1349 aa11.56□□□□□ -0.56
C11orf54-201ENST00000331239 SEC24BO95487 1268 aa11.56□□□□□ -0.56
C11orf54-201ENST00000331239 PRPF40BQ6NWY9 871 aaKnown RBP11.56□□□□□ -0.56
C11orf54-201ENST00000331239 CCDC24Q8N4L8 307 aa11.56□□□□□ -0.56
C11orf54-201ENST00000331239 ZNF622Q969S3 477 aaKnown RBP eCLIP11.56□□□□□ -0.56
C11orf54-201ENST00000331239 GGA1Q9UJY5 639 aa11.56□□□□□ -0.56
C11orf54-201ENST00000331239 SLX4Q8IY92 1834 aa11.56□□□□□ -0.56
C11orf54-201ENST00000331239 RFX7Q2KHR2 1363 aa11.56□□□□□ -0.56
C11orf54-201ENST00000331239 DPEP1P16444 411 aa11.55□□□□□ -0.56
C11orf54-201ENST00000331239 CAVIN4Q5BKX8 364 aa11.55□□□□□ -0.56
C11orf54-201ENST00000331239 XAGE2Q96GT9 111 aa11.55□□□□□ -0.56
C11orf54-201ENST00000331239 PSMD1Q99460 953 aa11.55□□□□□ -0.56
C11orf54-201ENST00000331239 UPF2Q9HAU5 1272 aaKnown RBP11.55□□□□□ -0.56
C11orf54-201ENST00000331239 IL1RAPL2Q9NP60 686 aa11.55□□□□□ -0.56
C11orf54-201ENST00000331239 ARID4AP29374 1257 aaPredicted RBP11.55□□□□□ -0.56
C11orf54-201ENST00000331239 LRRFIP1Q32MZ4 808 aaKnown RBP11.55□□□□□ -0.56
C11orf54-201ENST00000331239 DALRD3Q5D0E6 543 aaKnown RBP11.55□□□□□ -0.56
C11orf54-201ENST00000331239 TTC22Q5TAA0 569 aa11.55□□□□□ -0.56
C11orf54-201ENST00000331239 FBXO33Q7Z6M2 555 aa11.55□□□□□ -0.56
C11orf54-201ENST00000331239 MPNDQ8N594 471 aa11.55□□□□□ -0.56
C11orf54-201ENST00000331239 SNED1Q8TER0 1413 aa11.55□□□□□ -0.56
C11orf54-201ENST00000331239 LTBP3Q9NS15 1303 aa11.54□□□□□ -0.56
C11orf54-201ENST00000331239 IRS2Q9Y4H2 1338 aa11.54□□□□□ -0.56
C11orf54-201ENST00000331239 SMARCA5O60264 1052 aaPredicted RBP11.54□□□□□ -0.56
C11orf54-201ENST00000331239 KCNJ4P48050 445 aa11.54□□□□□ -0.56
C11orf54-201ENST00000331239 BECN1Q14457 450 aa11.54□□□□□ -0.56
C11orf54-201ENST00000331239 CCDC93Q567U6 631 aa11.54□□□□□ -0.56
C11orf54-201ENST00000331239 ANKIB1Q9P2G1 1089 aa11.54□□□□□ -0.56
C11orf54-201ENST00000331239 DBNLQ9UJU6 430 aaKnown RBP11.54□□□□□ -0.56
C11orf54-201ENST00000331239 COL4A1P02462 1669 aa11.54□□□□□ -0.56
C11orf54-201ENST00000331239 GORABQ5T7V8 394 aa11.54□□□□□ -0.56
C11orf54-201ENST00000331239 ZNF804AQ7Z570 1209 aa11.53□□□□□ -0.56
C11orf54-201ENST00000331239 PI4K2BQ8TCG2 481 aa11.53□□□□□ -0.56
C11orf54-201ENST00000331239 HAUS7Q99871 368 aa11.53□□□□□ -0.56
C11orf54-201ENST00000331239 APBB1O00213 710 aa11.53□□□□□ -0.56
C11orf54-201ENST00000331239 HIP1O00291 1037 aa11.53□□□□□ -0.56
C11orf54-201ENST00000331239 CHRNA5P30532 468 aa11.53□□□□□ -0.56
C11orf54-201ENST00000331239 GPSM2P81274 684 aa11.53□□□□□ -0.56
C11orf54-201ENST00000331239 TTF1Q15361 905 aaPredicted RBP11.53□□□□□ -0.56
C11orf54-201ENST00000331239 DPP8Q6V1X1 898 aaPredicted RBP11.53□□□□□ -0.56
C11orf54-201ENST00000331239 TBC1D16Q8TBP0 767 aa11.53□□□□□ -0.56
C11orf54-201ENST00000331239 NEUROD6Q96NK8 337 aa11.53□□□□□ -0.56
C11orf54-201ENST00000331239 CACNA1SQ13698 1873 aa11.53□□□□□ -0.56
C11orf54-201ENST00000331239 FER1L6Q2WGJ9 1857 aa11.52□□□□□ -0.56
C11orf54-201ENST00000331239 MMP14P50281 582 aa11.52□□□□□ -0.56
C11orf54-201ENST00000331239 EVI5LQ96CN4 794 aa11.52□□□□□ -0.56
C11orf54-201ENST00000331239 TBC1D32Q96NH3 1257 aa11.52□□□□□ -0.56
C11orf54-201ENST00000331239 DBNDD2Q9BQY9 259 aa11.52□□□□□ -0.56
C11orf54-201ENST00000331239 DENND2AQ9ULE3 1009 aa11.52□□□□□ -0.56
C11orf54-201ENST00000331239 TIMM10P62072 90 aa11.52□□□□□ -0.57
C11orf54-201ENST00000331239 TTC39AQ5SRH9 613 aa11.52□□□□□ -0.57
C11orf54-201ENST00000331239 C16orf71Q8IYS4 520 aaPredicted RBP11.52□□□□□ -0.57
C11orf54-201ENST00000331239 COA1Q9GZY4 146 aa11.52□□□□□ -0.57
C11orf54-201ENST00000331239 CCDC8Q9H0W5 538 aaPredicted RBP11.52□□□□□ -0.57
C11orf54-201ENST00000331239 AKAP11Q9UKA4 1901 aa11.52□□□□□ -0.57
C11orf54-201ENST00000331239 A0A0G2JLW4 131 aa11.51□□□□□ -0.57
C11orf54-201ENST00000331239 IL1R1P14778 569 aa11.51□□□□□ -0.57
C11orf54-201ENST00000331239 HIBADHP31937 336 aaKnown RBP11.51□□□□□ -0.57
C11orf54-201ENST00000331239 FKBP1AP62942 108 aaKnown RBP11.51□□□□□ -0.57
C11orf54-201ENST00000331239 CCDC102BQ68D86 513 aa11.51□□□□□ -0.57
C11orf54-201ENST00000331239 CNTROBQ8N137 903 aa11.51□□□□□ -0.57
C11orf54-201ENST00000331239 ZGPATQ8N5A5 531 aaKnown RBP11.51□□□□□ -0.57
C11orf54-201ENST00000331239 NSFL1CQ9UNZ2 370 aaKnown RBP11.51□□□□□ -0.57
C11orf54-201ENST00000331239 SALL1Q9NSC2 1324 aa11.51□□□□□ -0.57
C11orf54-201ENST00000331239 AK9Q5TCS8 1911 aa11.51□□□□□ -0.57
C11orf54-201ENST00000331239 UFL1O94874 794 aa11.51□□□□□ -0.57
C11orf54-201ENST00000331239 FAM84BQ96KN1 310 aaPredicted RBP11.51□□□□□ -0.57
C11orf54-201ENST00000331239 SUGT1Q9Y2Z0 365 aa11.51□□□□□ -0.57
C11orf54-201ENST00000331239 EPB41L2O43491 1005 aaKnown RBP11.5□□□□□ -0.57
C11orf54-201ENST00000331239 TAF5LO75529 589 aa11.5□□□□□ -0.57
C11orf54-201ENST00000331239 FKBP4Q02790 459 aaKnown RBP eCLIP11.5□□□□□ -0.57
C11orf54-201ENST00000331239 ZC3H12CQ9C0D7 883 aaKnown RBP11.5□□□□□ -0.57
C11orf54-201ENST00000331239 PPP1R1BQ9UD71 204 aaPredicted RBP11.5□□□□□ -0.57
C11orf54-201ENST00000331239 MYH13Q9UKX3 1938 aa11.5□□□□□ -0.57
C11orf54-201ENST00000331239 PODNQ7Z5L7 613 aa11.5□□□□□ -0.57
C11orf54-201ENST00000331239 HELBQ8NG08 1087 aaPredicted RBP11.5□□□□□ -0.57
C11orf54-201ENST00000331239 TDRD7Q8NHU6 1098 aaKnown RBP11.5□□□□□ -0.57
C11orf54-201ENST00000331239 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.5□□□□□ -0.57
C11orf54-201ENST00000331239 ZFYP08048 801 aaPredicted RBP11.49□□□□□ -0.57
C11orf54-201ENST00000331239 ZSCAN25Q6NSZ9 544 aa11.49□□□□□ -0.57
C11orf54-201ENST00000331239 CASC1Q6TDU7 716 aa11.49□□□□□ -0.57
C11orf54-201ENST00000331239 VPS37DQ86XT2 251 aa11.49□□□□□ -0.57
C11orf54-201ENST00000331239 TBC1D22AQ8WUA7 517 aa11.49□□□□□ -0.57
C11orf54-201ENST00000331239 POLLQ9UGP5 575 aa11.49□□□□□ -0.57
C11orf54-201ENST00000331239 FAM205AQ6ZU69 1335 aa11.49□□□□□ -0.57
C11orf54-201ENST00000331239 KIAA2012Q0VF49 1180 aa11.49□□□□□ -0.57
C11orf54-201ENST00000331239 GSE1Q14687 1217 aa11.49□□□□□ -0.57
C11orf54-201ENST00000331239 SPTY2D1Q68D10 685 aaPredicted RBP11.49□□□□□ -0.57
C11orf54-201ENST00000331239 WDR66Q8TBY9 1149 aa11.49□□□□□ -0.57
C11orf54-201ENST00000331239 OTUD7AQ8TE49 926 aaPredicted RBP11.49□□□□□ -0.57
C11orf54-201ENST00000331239 PSME4Q14997 1843 aa11.48□□□□□ -0.57
C11orf54-201ENST00000331239 DOCK2Q92608 1830 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms