RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 ZNF397Q8NF99 534 aaPredicted RBP18.93■□□□□ 0.62
SFXN1-201ENST00000321442 ANKRD18BA2A2Z9 1011 aa18.92■□□□□ 0.62
SFXN1-201ENST00000321442 CCDC129Q6ZRS4 1044 aa18.92■□□□□ 0.62
SFXN1-201ENST00000321442 FEZ1Q99689 392 aa18.92■□□□□ 0.62
SFXN1-201ENST00000321442 KIDINS220Q9ULH0 1771 aa18.92■□□□□ 0.62
SFXN1-201ENST00000321442 CCDC102BQ68D86 513 aa18.92■□□□□ 0.62
SFXN1-201ENST00000321442 TTC41PQ6P2S7 1318 aa18.92■□□□□ 0.62
SFXN1-201ENST00000321442 CCDC181Q5TID7 509 aa18.92■□□□□ 0.62
SFXN1-201ENST00000321442 KIAA1328Q86T90 577 aa18.92■□□□□ 0.62
SFXN1-201ENST00000321442 CRACR2AQ9BSW2 395 aa18.92■□□□□ 0.62
SFXN1-201ENST00000321442 PTPDC1A2A3K4 754 aa18.92■□□□□ 0.62
SFXN1-201ENST00000321442 JAK2O60674 1132 aa18.92■□□□□ 0.62
SFXN1-201ENST00000321442 PYCARDQ9ULZ3 195 aa18.92■□□□□ 0.62
SFXN1-201ENST00000321442 IFIT3O14879 490 aaKnown RBP18.91■□□□□ 0.62
SFXN1-201ENST00000321442 GIGYF1O75420 1035 aaPredicted RBP18.91■□□□□ 0.62
SFXN1-201ENST00000321442 IARSP41252 1262 aaKnown RBP18.91■□□□□ 0.62
SFXN1-201ENST00000321442 ELF2Q15723 593 aa18.91■□□□□ 0.62
SFXN1-201ENST00000321442 MCMDC2Q4G0Z9 681 aa18.91■□□□□ 0.62
SFXN1-201ENST00000321442 ZSCAN25Q6NSZ9 544 aa18.91■□□□□ 0.62
SFXN1-201ENST00000321442 TTLL7Q6ZT98 887 aa18.91■□□□□ 0.62
SFXN1-201ENST00000321442 RASEFQ8IZ41 740 aa18.91■□□□□ 0.62
SFXN1-201ENST00000321442 NAPBQ9H115 298 aa18.91■□□□□ 0.62
SFXN1-201ENST00000321442 NCOA5Q9HCD5 579 aaKnown RBP18.91■□□□□ 0.62
SFXN1-201ENST00000321442 DIP2CQ9Y2E4 1556 aa18.91■□□□□ 0.62
SFXN1-201ENST00000321442 NCBP3Q53F19 620 aaKnown RBP18.91■□□□□ 0.62
SFXN1-201ENST00000321442 LEO1Q8WVC0 666 aaPredicted RBP18.91■□□□□ 0.62
SFXN1-201ENST00000321442 EDC3Q96F86 508 aaKnown RBP18.91■□□□□ 0.62
SFXN1-201ENST00000321442 MADDQ8WXG6 1647 aa18.9■□□□□ 0.62
SFXN1-201ENST00000321442 ALKQ9UM73 1620 aa18.9■□□□□ 0.62
SFXN1-201ENST00000321442 ZNF75DP51815 510 aa18.9■□□□□ 0.62
SFXN1-201ENST00000321442 OTUD7BQ6GQQ9 843 aa18.9■□□□□ 0.62
SFXN1-201ENST00000321442 ARFGAP3Q9NP61 516 aa18.9■□□□□ 0.62
SFXN1-201ENST00000321442 GOLGA8AA7E2F4 631 aa18.9■□□□□ 0.62
SFXN1-201ENST00000321442 DNA2P51530 1060 aa18.9■□□□□ 0.62
SFXN1-201ENST00000321442 TFCP2Q12800 502 aa18.9■□□□□ 0.62
SFXN1-201ENST00000321442 ME3Q16798 604 aa18.9■□□□□ 0.62
SFXN1-201ENST00000321442 USP44Q9H0E7 712 aa18.9■□□□□ 0.62
SFXN1-201ENST00000321442 ASAP1Q9ULH1 1129 aa18.9■□□□□ 0.62
SFXN1-201ENST00000321442 PHKG2P15735 406 aa18.89■□□□□ 0.62
SFXN1-201ENST00000321442 EPS15P42566 896 aa18.89■□□□□ 0.62
SFXN1-201ENST00000321442 RBM5P52756 815 aaKnown RBP eCLIP18.89■□□□□ 0.62
SFXN1-201ENST00000321442 SPTLC2O15270 562 aa18.89■□□□□ 0.61
SFXN1-201ENST00000321442 ZNF652Q9Y2D9 606 aa18.89■□□□□ 0.61
SFXN1-201ENST00000321442 ABCA6Q8N139 1617 aa18.89■□□□□ 0.61
SFXN1-201ENST00000321442 IBSPP21815 317 aaPredicted RBP18.89■□□□□ 0.61
SFXN1-201ENST00000321442 SUCLG2Q96I99 432 aa18.89■□□□□ 0.61
SFXN1-201ENST00000321442 UTP14AQ9BVJ6 771 aaKnown RBP18.89■□□□□ 0.61
SFXN1-201ENST00000321442 TANGO6Q9C0B7 1094 aa18.89■□□□□ 0.61
SFXN1-201ENST00000321442 SLC12A7Q9Y666 1083 aa18.89■□□□□ 0.61
SFXN1-201ENST00000321442 SLC27A2O14975 620 aa18.89■□□□□ 0.61
SFXN1-201ENST00000321442 PTH1RQ03431 593 aa18.89■□□□□ 0.61
SFXN1-201ENST00000321442 NUP88Q99567 741 aaPredicted RBP18.89■□□□□ 0.61
SFXN1-201ENST00000321442 GLI2P10070 1586 aa18.88■□□□□ 0.61
SFXN1-201ENST00000321442 PCDH11XQ9BZA7 1347 aa18.88■□□□□ 0.61
SFXN1-201ENST00000321442 PCDH11YQ9BZA8 1340 aa18.88■□□□□ 0.61
SFXN1-201ENST00000321442 PHACTR2O75167 634 aa18.88■□□□□ 0.61
SFXN1-201ENST00000321442 STIM1Q13586 685 aa18.88■□□□□ 0.61
SFXN1-201ENST00000321442 TTC6Q86TZ1 520 aa18.88■□□□□ 0.61
SFXN1-201ENST00000321442 GNL3LQ9NVN8 582 aaKnown RBP18.88■□□□□ 0.61
SFXN1-201ENST00000321442 RFC4P35249 363 aa18.88■□□□□ 0.61
SFXN1-201ENST00000321442 KARSQ15046 597 aaKnown RBP18.88■□□□□ 0.61
SFXN1-201ENST00000321442 NBPF5PQ86XG9 351 aaPredicted RBP18.88■□□□□ 0.61
SFXN1-201ENST00000321442 SLC26A6Q9BXS9 759 aa18.88■□□□□ 0.61
SFXN1-201ENST00000321442 RXRAP19793 462 aa18.88■□□□□ 0.61
SFXN1-201ENST00000321442 BRINP3Q76B58 766 aa18.88■□□□□ 0.61
SFXN1-201ENST00000321442 KCNG4Q8TDN1 519 aa18.88■□□□□ 0.61
SFXN1-201ENST00000321442 SYNMO15061 1565 aa18.87■□□□□ 0.61
SFXN1-201ENST00000321442 METAP2P50579 478 aaKnown RBP eCLIP18.87■□□□□ 0.61
SFXN1-201ENST00000321442 NRBP1Q9UHY1 535 aa18.87■□□□□ 0.61
SFXN1-201ENST00000321442 MTMR6Q9Y217 621 aa18.87■□□□□ 0.61
SFXN1-201ENST00000321442 IGSF1Q8N6C5 1336 aa18.87■□□□□ 0.61
SFXN1-201ENST00000321442 FAM135BQ49AJ0 1406 aa18.87■□□□□ 0.61
SFXN1-201ENST00000321442 ALDH1L1O75891 902 aa18.87■□□□□ 0.61
SFXN1-201ENST00000321442 SF3B2Q13435 895 aaKnown RBP18.87■□□□□ 0.61
SFXN1-201ENST00000321442 ALG1Q9BT22 464 aa18.87■□□□□ 0.61
SFXN1-201ENST00000321442 WASF1Q92558 559 aa18.86■□□□□ 0.61
SFXN1-201ENST00000321442 AFMP43652 599 aa18.86■□□□□ 0.61
SFXN1-201ENST00000321442 RPS6KB1P23443 525 aa18.86■□□□□ 0.61
SFXN1-201ENST00000321442 CLSTN2Q9H4D0 955 aa18.86■□□□□ 0.61
SFXN1-201ENST00000321442 ZHX3Q9H4I2 956 aa18.86■□□□□ 0.61
SFXN1-201ENST00000321442 ERBB3P21860 1342 aa18.86■□□□□ 0.61
SFXN1-201ENST00000321442 C6orf229H3BNL8 230 aa18.85■□□□□ 0.61
SFXN1-201ENST00000321442 KIAA0754O94854 1291 aa18.85■□□□□ 0.61
SFXN1-201ENST00000321442 RDXP35241 583 aaKnown RBP18.85■□□□□ 0.61
SFXN1-201ENST00000321442 TMEM67Q5HYA8 995 aa18.85■□□□□ 0.61
SFXN1-201ENST00000321442 NCOA7Q8NI08 942 aa18.85■□□□□ 0.61
SFXN1-201ENST00000321442 CDK5RAP3Q96JB5 506 aa18.85■□□□□ 0.61
SFXN1-201ENST00000321442 GBP3Q9H0R5 595 aa18.85■□□□□ 0.61
SFXN1-201ENST00000321442 AKAP2Q9Y2D5 859 aa18.85■□□□□ 0.61
SFXN1-201ENST00000321442 NR1I2O75469 434 aa18.85■□□□□ 0.61
SFXN1-201ENST00000321442 KIF20AO95235 890 aa18.85■□□□□ 0.61
SFXN1-201ENST00000321442 DHX32Q7L7V1 743 aaKnown RBP18.85■□□□□ 0.61
SFXN1-201ENST00000321442 ADCK5Q3MIX3 580 aa18.85■□□□□ 0.61
SFXN1-201ENST00000321442 CCDC148Q8NFR7 591 aa18.85■□□□□ 0.61
SFXN1-201ENST00000321442 TEX13AQ9BXU3 409 aaPredicted RBP18.85■□□□□ 0.61
SFXN1-201ENST00000321442 LZTFL1Q9NQ48 299 aa18.85■□□□□ 0.61
SFXN1-201ENST00000321442 IRS4O14654 1257 aaPredicted RBP18.85■□□□□ 0.61
SFXN1-201ENST00000321442 SSBP05455 408 aaKnown RBP eCLIP18.84■□□□□ 0.61
SFXN1-201ENST00000321442 IKQ13123 557 aaPredicted RBP18.84■□□□□ 0.61
SFXN1-201ENST00000321442 KIF2CQ99661 725 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms