RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 RNF113AO15541 343 aaKnown RBP9.03□□□□□ -0.96
IFT88-201ENST00000319980 STX6O43752 255 aa9.03□□□□□ -0.96
IFT88-201ENST00000319980 GJB2P29033 226 aa9.03□□□□□ -0.96
IFT88-201ENST00000319980 MRE11P49959 708 aa9.03□□□□□ -0.96
IFT88-201ENST00000319980 ZMYM1Q5SVZ6 1142 aa9.03□□□□□ -0.96
IFT88-201ENST00000319980 SUSD4Q5VX71 490 aa9.03□□□□□ -0.96
IFT88-201ENST00000319980 PI16Q6UXB8 463 aa9.03□□□□□ -0.96
IFT88-201ENST00000319980 IFNLR1Q8IU57 520 aaPredicted RBP9.03□□□□□ -0.96
IFT88-201ENST00000319980 GPT2Q8TD30 523 aa9.03□□□□□ -0.96
IFT88-201ENST00000319980 PANK2Q9BZ23 570 aa9.03□□□□□ -0.96
IFT88-201ENST00000319980 GRPEL1Q9HAV7 217 aa9.03□□□□□ -0.96
IFT88-201ENST00000319980 GDPD2Q9HCC8 539 aa9.03□□□□□ -0.96
IFT88-201ENST00000319980 USP21Q9UK80 565 aa9.03□□□□□ -0.96
IFT88-201ENST00000319980 ZAP70P43403 619 aa9.02□□□□□ -0.97
IFT88-201ENST00000319980 ST3GAL1Q11201 340 aa9.02□□□□□ -0.97
IFT88-201ENST00000319980 ANKRD1Q15327 319 aa9.02□□□□□ -0.97
IFT88-201ENST00000319980 RREB1Q92766 1687 aa9.02□□□□□ -0.97
IFT88-201ENST00000319980 TOB2Q14106 344 aaPredicted RBP9.02□□□□□ -0.97
IFT88-201ENST00000319980 WASHC4Q2M389 1173 aa9.02□□□□□ -0.97
IFT88-201ENST00000319980 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.02□□□□□ -0.97
IFT88-201ENST00000319980 ZSCAN22P10073 491 aaPredicted RBP9.01□□□□□ -0.97
IFT88-201ENST00000319980 HSPD1P10809 573 aaKnown RBP9.01□□□□□ -0.97
IFT88-201ENST00000319980 KCNQ4P56696 695 aa9.01□□□□□ -0.97
IFT88-201ENST00000319980 STK3Q13188 491 aa9.01□□□□□ -0.97
IFT88-201ENST00000319980 HELBQ8NG08 1087 aaPredicted RBP9.01□□□□□ -0.97
IFT88-201ENST00000319980 OSBP2Q969R2 916 aa9.01□□□□□ -0.97
IFT88-201ENST00000319980 GJD4Q96KN9 370 aaPredicted RBP9.01□□□□□ -0.97
IFT88-201ENST00000319980 ISY1Q9ULR0 285 aaKnown RBP9.01□□□□□ -0.97
IFT88-201ENST00000319980 NSFL1CQ9UNZ2 370 aaKnown RBP9.01□□□□□ -0.97
IFT88-201ENST00000319980 MAST3O60307 1309 aa9.01□□□□□ -0.97
IFT88-201ENST00000319980 PDE8BO95263 885 aa9.01□□□□□ -0.97
IFT88-201ENST00000319980 VASPP50552 380 aaPredicted RBP9.01□□□□□ -0.97
IFT88-201ENST00000319980 DSCC1Q9BVC3 393 aa9.01□□□□□ -0.97
IFT88-201ENST00000319980 UTP14AQ9BVJ6 771 aaKnown RBP9.01□□□□□ -0.97
IFT88-201ENST00000319980 RBM27Q9P2N5 1060 aaKnown RBP9.01□□□□□ -0.97
IFT88-201ENST00000319980 NIP7Q9Y221 180 aaKnown RBP eCLIP9.01□□□□□ -0.97
IFT88-201ENST00000319980 CAMTA2O94983 1202 aa9.01□□□□□ -0.97
IFT88-201ENST00000319980 FGD1P98174 961 aa9.01□□□□□ -0.97
IFT88-201ENST00000319980 LRRFIP1Q32MZ4 808 aaKnown RBP9.01□□□□□ -0.97
IFT88-201ENST00000319980 ZSCAN23Q3MJ62 389 aa9.01□□□□□ -0.97
IFT88-201ENST00000319980 TICAM2Q86XR7 235 aa9.01□□□□□ -0.97
IFT88-201ENST00000319980 SMARCC1Q92922 1105 aaPredicted RBP9.01□□□□□ -0.97
IFT88-201ENST00000319980 LRRC2Q9BYS8 371 aa9.01□□□□□ -0.97
IFT88-201ENST00000319980 A0A0G2JLW4 131 aa9□□□□□ -0.97
IFT88-201ENST00000319980 M0R2C6 588 aa9□□□□□ -0.97
IFT88-201ENST00000319980 MCAMP43121 646 aa9□□□□□ -0.97
IFT88-201ENST00000319980 STOX1Q6ZVD7 989 aa9□□□□□ -0.97
IFT88-201ENST00000319980 VGLL2Q8N8G2 317 aa9□□□□□ -0.97
IFT88-201ENST00000319980 VPS37CA5D8V6 355 aaPredicted RBP9□□□□□ -0.97
IFT88-201ENST00000319980 Q6ZUG5 572 aa9□□□□□ -0.97
IFT88-201ENST00000319980 ALDH8A1Q9H2A2 487 aaPredicted RBP9□□□□□ -0.97
IFT88-201ENST00000319980 SEC31BQ9NQW1 1179 aa9□□□□□ -0.97
IFT88-201ENST00000319980 RIC1Q4ADV7 1423 aa9□□□□□ -0.97
IFT88-201ENST00000319980 SNAP23O00161 211 aa8.99□□□□□ -0.97
IFT88-201ENST00000319980 F13A1P00488 732 aa8.99□□□□□ -0.97
IFT88-201ENST00000319980 LARP1BQ659C4 914 aaKnown RBP8.99□□□□□ -0.97
IFT88-201ENST00000319980 TTLL5Q6EMB2 1281 aa8.99□□□□□ -0.97
IFT88-201ENST00000319980 USP48Q86UV5 1035 aa8.99□□□□□ -0.97
IFT88-201ENST00000319980 MPHOSPH8Q99549 860 aa8.99□□□□□ -0.97
IFT88-201ENST00000319980 DOT1LQ8TEK3 1739 aa8.99□□□□□ -0.97
IFT88-201ENST00000319980 ZFYP08048 801 aaPredicted RBP8.99□□□□□ -0.97
IFT88-201ENST00000319980 HSP90B1P14625 803 aaKnown RBP8.99□□□□□ -0.97
IFT88-201ENST00000319980 PARP10Q53GL7 1025 aa8.99□□□□□ -0.97
IFT88-201ENST00000319980 CCDC102BQ68D86 513 aa8.99□□□□□ -0.97
IFT88-201ENST00000319980 PTF1AQ7RTS3 328 aa8.99□□□□□ -0.97
IFT88-201ENST00000319980 BRF1Q92994 677 aa8.99□□□□□ -0.97
IFT88-201ENST00000319980 PUS7LQ9H0K6 701 aaKnown RBP8.99□□□□□ -0.97
IFT88-201ENST00000319980 TMEM63CQ9P1W3 806 aa8.99□□□□□ -0.97
IFT88-201ENST00000319980 MTMR6Q9Y217 621 aa8.99□□□□□ -0.97
IFT88-201ENST00000319980 CNPY2Q9Y2B0 182 aa8.99□□□□□ -0.97
IFT88-201ENST00000319980 MBD3O95983 291 aa8.99□□□□□ -0.97
IFT88-201ENST00000319980 PHKA1P46020 1223 aa8.99□□□□□ -0.97
IFT88-201ENST00000319980 AK7Q96M32 723 aa8.99□□□□□ -0.97
IFT88-201ENST00000319980 ATP6V1DQ9Y5K8 247 aa8.99□□□□□ -0.97
IFT88-201ENST00000319980 E7EWF7 191 aa8.98□□□□□ -0.97
IFT88-201ENST00000319980 GADD45BO75293 160 aaPredicted RBP8.98□□□□□ -0.97
IFT88-201ENST00000319980 IDH1O75874 414 aaKnown RBP8.98□□□□□ -0.97
IFT88-201ENST00000319980 HMGB1P09429 215 aaKnown RBP8.98□□□□□ -0.97
IFT88-201ENST00000319980 PUM3Q15397 648 aaKnown RBP8.98□□□□□ -0.97
IFT88-201ENST00000319980 SLC9C2Q5TAH2 1124 aa8.98□□□□□ -0.97
IFT88-201ENST00000319980 SMIM5Q71RC9 77 aa8.98□□□□□ -0.97
IFT88-201ENST00000319980 DHX32Q7L7V1 743 aaKnown RBP8.98□□□□□ -0.97
IFT88-201ENST00000319980 LPIN2Q92539 896 aa8.98□□□□□ -0.97
IFT88-201ENST00000319980 APPBP2Q92624 585 aa8.98□□□□□ -0.97
IFT88-201ENST00000319980 MROH5Q6ZUA9 1318 aa8.98□□□□□ -0.97
IFT88-201ENST00000319980 ZNF445P59923 1031 aa8.98□□□□□ -0.97
IFT88-201ENST00000319980 HAND2P61296 217 aa8.98□□□□□ -0.97
IFT88-201ENST00000319980 CCDC152Q4G0S7 254 aa8.98□□□□□ -0.97
IFT88-201ENST00000319980 FAM182BQ5T319 152 aa8.98□□□□□ -0.97
IFT88-201ENST00000319980 CHST3Q7LGC8 479 aa8.98□□□□□ -0.97
IFT88-201ENST00000319980 LINC00116Q8NCU8 138 aa8.98□□□□□ -0.97
IFT88-201ENST00000319980 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.98□□□□□ -0.97
IFT88-201ENST00000319980 ZNF652Q9Y2D9 606 aa8.98□□□□□ -0.97
IFT88-201ENST00000319980 FIBPO43427 364 aa8.97□□□□□ -0.97
IFT88-201ENST00000319980 NTSR2O95665 410 aa8.97□□□□□ -0.97
IFT88-201ENST00000319980 FGAP02671 866 aa8.97□□□□□ -0.97
IFT88-201ENST00000319980 FERMT3Q86UX7 667 aa8.97□□□□□ -0.97
IFT88-201ENST00000319980 SYCE3A1L190 88 aa8.97□□□□□ -0.97
IFT88-201ENST00000319980 FOXP2O15409 715 aa8.97□□□□□ -0.97
IFT88-201ENST00000319980 GPAA1O43292 621 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms