RNA–Protein interactions for RNA: ENST00000297977.9

HDX-201, Transcript of highly divergent homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDX, Length 6,200 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDX-201ENST00000297977 C1orf115Q9H7X2 142 aa3.67□□□□□ -1.82
HDX-201ENST00000297977 GPBP1L1Q9HC44 474 aaPredicted RBP3.67□□□□□ -1.82
HDX-201ENST00000297977 COPRSQ9NQ92 184 aa3.67□□□□□ -1.82
HDX-201ENST00000297977 CCDC196A0A1B0GTZ2 297 aa3.67□□□□□ -1.82
HDX-201ENST00000297977 RBM26Q5T8P6 1007 aaKnown RBP3.67□□□□□ -1.82
HDX-201ENST00000297977 TTLL5Q6EMB2 1281 aa3.67□□□□□ -1.82
HDX-201ENST00000297977 GZF1Q9H116 711 aaPredicted RBP3.67□□□□□ -1.82
HDX-201ENST00000297977 BRMS1Q9HCU9 246 aa3.67□□□□□ -1.82
HDX-201ENST00000297977 GPR108Q9NPR9 543 aa3.67□□□□□ -1.82
HDX-201ENST00000297977 PNMA2Q9UL42 364 aa3.67□□□□□ -1.82
HDX-201ENST00000297977 CSADQ9Y600 493 aa3.67□□□□□ -1.82
HDX-201ENST00000297977 ZNF804BA4D1E1 1349 aa3.67□□□□□ -1.82
HDX-201ENST00000297977 TTC41PQ6P2S7 1318 aa3.67□□□□□ -1.82
HDX-201ENST00000297977 BCL9O00512 1426 aa3.67□□□□□ -1.82
HDX-201ENST00000297977 HS1BP3Q53T59 392 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 EAPPQ56P03 285 aaPredicted RBP3.66□□□□□ -1.82
HDX-201ENST00000297977 VPS53Q5VIR6 699 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 WDR78Q5VTH9 848 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 CHD1LQ86WJ1 897 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 AHDC1Q5TGY3 1603 aaPredicted RBP3.66□□□□□ -1.82
HDX-201ENST00000297977 CEMIPQ8WUJ3 1361 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 ABCC6O95255 1503 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 CYP7A1P22680 504 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 SF3B3Q15393 1217 aaKnown RBP3.66□□□□□ -1.82
HDX-201ENST00000297977 BEND3Q5T5X7 828 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 PNMA8AQ86V59 439 aaPredicted RBP3.66□□□□□ -1.82
HDX-201ENST00000297977 TRIM22Q8IYM9 498 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 FAM177A1Q8N128 213 aaPredicted RBP3.66□□□□□ -1.82
HDX-201ENST00000297977 ISCA1Q9BUE6 129 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 CCDC8Q9H0W5 538 aaPredicted RBP3.66□□□□□ -1.82
HDX-201ENST00000297977 BSDC1Q9NW68 430 aaPredicted RBP3.66□□□□□ -1.82
HDX-201ENST00000297977 DDX11L8A8MPP1 907 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 MBD3O95983 291 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 VASPP50552 380 aaPredicted RBP3.66□□□□□ -1.82
HDX-201ENST00000297977 ANKRD1Q15327 319 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 MFSD14BQ5SR56 506 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 G2E3Q7L622 706 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 COL23A1Q86Y22 540 aaPredicted RBP3.66□□□□□ -1.82
HDX-201ENST00000297977 HELBQ8NG08 1087 aaPredicted RBP3.66□□□□□ -1.82
HDX-201ENST00000297977 VPS33BQ9H267 617 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 BOLA2Q9H3K6 86 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 MED1Q15648 1581 aaPredicted RBP3.66□□□□□ -1.82
HDX-201ENST00000297977 H7C1W4 665 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 C21orf2O43822 256 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 CIAO1O76071 339 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 PDE8BO95263 885 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 ITPK1Q13572 414 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 PRR5LQ6MZQ0 368 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 PICK1Q9NRD5 415 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 XRN1Q8IZH2 1706 aaKnown RBP3.66□□□□□ -1.82
HDX-201ENST00000297977 MAP4K4O95819 1239 aaPredicted RBP3.66□□□□□ -1.82
HDX-201ENST00000297977 GYS1P13807 737 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 LMNB1P20700 586 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 HDAC1Q13547 482 aaPredicted RBP3.66□□□□□ -1.82
HDX-201ENST00000297977 SUSD4Q5VX71 490 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 LTBP4Q8N2S1 1624 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 JARID2Q92833 1246 aaPredicted RBP3.66□□□□□ -1.82
HDX-201ENST00000297977 ZNRF3Q9ULT6 936 aa3.66□□□□□ -1.82
HDX-201ENST00000297977 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.65□□□□□ -1.82
HDX-201ENST00000297977 CDKL5O76039 1030 aa3.65□□□□□ -1.82
HDX-201ENST00000297977 CAMTA2O94983 1202 aa3.65□□□□□ -1.82
HDX-201ENST00000297977 RPS12P25398 132 aaKnown RBP3.65□□□□□ -1.82
HDX-201ENST00000297977 GTF2IP78347 998 aa3.65□□□□□ -1.82
HDX-201ENST00000297977 RRP12Q5JTH9 1297 aaKnown RBP3.65□□□□□ -1.82
HDX-201ENST00000297977 TEX11Q8IYF3 940 aa3.65□□□□□ -1.82
HDX-201ENST00000297977 LINC00116Q8NCU8 138 aa3.65□□□□□ -1.82
HDX-201ENST00000297977 CCDC43Q96MW1 224 aaKnown RBP3.65□□□□□ -1.82
HDX-201ENST00000297977 BICC1Q9H694 974 aaKnown RBP3.65□□□□□ -1.82
HDX-201ENST00000297977 MTMR7Q9Y216 660 aa3.65□□□□□ -1.82
HDX-201ENST00000297977 A0A1B0GUL7 405 aa3.65□□□□□ -1.82
HDX-201ENST00000297977 VEGFAP15692 232 aaPredicted RBP3.65□□□□□ -1.82
HDX-201ENST00000297977 GNAQP50148 359 aa3.65□□□□□ -1.82
HDX-201ENST00000297977 NUCB2P80303 420 aa3.65□□□□□ -1.82
HDX-201ENST00000297977 SLC9C2Q5TAH2 1124 aa3.65□□□□□ -1.82
HDX-201ENST00000297977 ARMC9Q7Z3E5 817 aa3.65□□□□□ -1.82
HDX-201ENST00000297977 TMTC2Q8N394 836 aa3.65□□□□□ -1.82
HDX-201ENST00000297977 CCDC24Q8N4L8 307 aa3.65□□□□□ -1.82
HDX-201ENST00000297977 CTCFLQ8NI51 663 aaPredicted RBP3.65□□□□□ -1.82
HDX-201ENST00000297977 CAMKK2Q96RR4 588 aa3.65□□□□□ -1.82
HDX-201ENST00000297977 SNRKQ9NRH2 765 aa3.65□□□□□ -1.82
HDX-201ENST00000297977 BCL9LQ86UU0 1499 aa3.65□□□□□ -1.83
HDX-201ENST00000297977 USP17L3A6NCW0 530 aa3.65□□□□□ -1.83
HDX-201ENST00000297977 USP17L4A6NCW7 530 aa3.65□□□□□ -1.83
HDX-201ENST00000297977 F8W031 263 aaPredicted RBP3.65□□□□□ -1.83
HDX-201ENST00000297977 GOLIM4O00461 696 aa3.65□□□□□ -1.83
HDX-201ENST00000297977 USP17L8P0C7I0 530 aa3.65□□□□□ -1.83
HDX-201ENST00000297977 SLC10A5Q5PT55 438 aa3.65□□□□□ -1.83
HDX-201ENST00000297977 USP17L1Q7RTZ2 530 aa3.65□□□□□ -1.83
HDX-201ENST00000297977 ZNF34Q8IZ26 560 aa3.65□□□□□ -1.83
HDX-201ENST00000297977 RASSF8Q8NHQ8 419 aa3.65□□□□□ -1.83
HDX-201ENST00000297977 USP44Q9H0E7 712 aa3.65□□□□□ -1.83
HDX-201ENST00000297977 TTF2Q9UNY4 1162 aaKnown RBP3.65□□□□□ -1.83
HDX-201ENST00000297977 SUGT1Q9Y2Z0 365 aa3.65□□□□□ -1.83
HDX-201ENST00000297977 ATP6V0A2Q9Y487 856 aa3.65□□□□□ -1.83
HDX-201ENST00000297977 CAMTA1Q9Y6Y1 1673 aa3.65□□□□□ -1.83
HDX-201ENST00000297977 RGS12O14924 1447 aa3.65□□□□□ -1.83
HDX-201ENST00000297977 MINDY4BA8MYZ0 360 aa3.65□□□□□ -1.83
HDX-201ENST00000297977 TUBBP07437 444 aa3.65□□□□□ -1.83
HDX-201ENST00000297977 PDCP20941 246 aa3.65□□□□□ -1.83
HDX-201ENST00000297977 DEKP35659 375 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms