RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 ZNF287Q9HBT7 754 aa17.62■□□□□ 0.41
FNDC1-201ENST00000297267 ZYXQ15942 572 aaKnown RBP17.62■□□□□ 0.41
FNDC1-201ENST00000297267 CCDC150Q8NCX0 1101 aa17.62■□□□□ 0.41
FNDC1-201ENST00000297267 PPP1R9BQ96SB3 815 aa17.62■□□□□ 0.41
FNDC1-201ENST00000297267 MAGEB6P1A0A0J9YX57 407 aa17.62■□□□□ 0.41
FNDC1-201ENST00000297267 GRM8O00222 908 aa17.62■□□□□ 0.41
FNDC1-201ENST00000297267 CHMP2AO43633 222 aa17.62■□□□□ 0.41
FNDC1-201ENST00000297267 SNRPA1P09661 255 aaKnown RBP17.62■□□□□ 0.41
FNDC1-201ENST00000297267 TBC1D7Q9P0N9 293 aa17.62■□□□□ 0.41
FNDC1-201ENST00000297267 A0A1W2PRG0 241 aa17.62■□□□□ 0.41
FNDC1-201ENST00000297267 RNF41Q9H4P4 317 aaPredicted RBP17.62■□□□□ 0.41
FNDC1-201ENST00000297267 RAD51AP2Q09MP3 1159 aa17.62■□□□□ 0.41
FNDC1-201ENST00000297267 CCDC50Q8IVM0 306 aa17.62■□□□□ 0.41
FNDC1-201ENST00000297267 SIRT1Q96EB6 747 aa17.62■□□□□ 0.41
FNDC1-201ENST00000297267 PSMB7Q99436 277 aa17.62■□□□□ 0.41
FNDC1-201ENST00000297267 INCENPQ9NQS7 918 aa17.62■□□□□ 0.41
FNDC1-201ENST00000297267 TIMM10P62072 90 aa17.61■□□□□ 0.41
FNDC1-201ENST00000297267 DNMBPQ6XZF7 1577 aa17.61■□□□□ 0.41
FNDC1-201ENST00000297267 CTDSPL2Q05D32 466 aa17.61■□□□□ 0.41
FNDC1-201ENST00000297267 FAM227BQ96M60 508 aa17.61■□□□□ 0.41
FNDC1-201ENST00000297267 CEP63Q96MT8 703 aa17.61■□□□□ 0.41
FNDC1-201ENST00000297267 ZEB2O60315 1214 aa17.61■□□□□ 0.41
FNDC1-201ENST00000297267 EEF2P13639 858 aaKnown RBP17.61■□□□□ 0.41
FNDC1-201ENST00000297267 ARL1P40616 181 aaPredicted RBP17.61■□□□□ 0.41
FNDC1-201ENST00000297267 DCAF17Q5H9S7 520 aaPredicted RBP17.61■□□□□ 0.41
FNDC1-201ENST00000297267 SYNCQ9H7C4 482 aa17.61■□□□□ 0.41
FNDC1-201ENST00000297267 RRAGDQ9NQL2 400 aaPredicted RBP17.61■□□□□ 0.41
FNDC1-201ENST00000297267 DCAF8L1A6NGE4 600 aa17.6■□□□□ 0.41
FNDC1-201ENST00000297267 TAF5LO75529 589 aa17.6■□□□□ 0.41
FNDC1-201ENST00000297267 ATP2B3Q16720 1220 aa17.6■□□□□ 0.41
FNDC1-201ENST00000297267 VPS36Q86VN1 386 aa17.6■□□□□ 0.41
FNDC1-201ENST00000297267 HARSP12081 509 aaKnown RBP17.6■□□□□ 0.41
FNDC1-201ENST00000297267 PLEKHM2Q8IWE5 1019 aa17.6■□□□□ 0.41
FNDC1-201ENST00000297267 TMCO4Q5TGY1 634 aa17.6■□□□□ 0.41
FNDC1-201ENST00000297267 GPCPD1Q9NPB8 672 aa17.6■□□□□ 0.41
FNDC1-201ENST00000297267 PTPDC1A2A3K4 754 aa17.6■□□□□ 0.41
FNDC1-201ENST00000297267 GSTA5Q7RTV2 222 aa17.6■□□□□ 0.41
FNDC1-201ENST00000297267 CARD14Q9BXL6 1004 aa17.6■□□□□ 0.41
FNDC1-201ENST00000297267 VWA3AA6NCI4 1184 aa17.6■□□□□ 0.41
FNDC1-201ENST00000297267 DDX39AO00148 427 aaKnown RBP17.6■□□□□ 0.41
FNDC1-201ENST00000297267 AKR1B10O60218 316 aa17.6■□□□□ 0.41
FNDC1-201ENST00000297267 TTF1Q15361 905 aaPredicted RBP17.6■□□□□ 0.41
FNDC1-201ENST00000297267 ASXL1Q8IXJ9 1541 aa17.6■□□□□ 0.41
FNDC1-201ENST00000297267 CRNKL1Q9BZJ0 848 aaKnown RBP17.59■□□□□ 0.41
FNDC1-201ENST00000297267 B4E1Z4 1266 aa17.59■□□□□ 0.41
FNDC1-201ENST00000297267 DESP17661 470 aa17.59■□□□□ 0.41
FNDC1-201ENST00000297267 U2AF2P26368 475 aaKnown RBP eCLIP17.59■□□□□ 0.41
FNDC1-201ENST00000297267 HOOK3Q86VS8 718 aa17.59■□□□□ 0.41
FNDC1-201ENST00000297267 GCOM1H8Y6P7 765 aaPredicted RBP17.59■□□□□ 0.41
FNDC1-201ENST00000297267 MYZAPP0CAP1 466 aa17.59■□□□□ 0.41
FNDC1-201ENST00000297267 TNNI2P48788 182 aa17.59■□□□□ 0.41
FNDC1-201ENST00000297267 STAMQ92783 540 aa17.59■□□□□ 0.41
FNDC1-201ENST00000297267 ARMT1Q9H993 441 aa17.59■□□□□ 0.41
FNDC1-201ENST00000297267 NAA16Q6N069 864 aaPredicted RBP17.59■□□□□ 0.41
FNDC1-201ENST00000297267 IRX5P78411 483 aaPredicted RBP17.58■□□□□ 0.41
FNDC1-201ENST00000297267 ZCRB1Q8TBF4 217 aaKnown RBP17.58■□□□□ 0.41
FNDC1-201ENST00000297267 MCM9Q9NXL9 1143 aa17.58■□□□□ 0.41
FNDC1-201ENST00000297267 TBCAO75347 108 aaKnown RBP17.58■□□□□ 0.4
FNDC1-201ENST00000297267 RAPGEF1Q13905 1077 aa17.58■□□□□ 0.4
FNDC1-201ENST00000297267 RUFY3Q7L099 469 aa17.58■□□□□ 0.4
FNDC1-201ENST00000297267 VTI1AQ96AJ9 217 aa17.58■□□□□ 0.4
FNDC1-201ENST00000297267 RAB34Q9BZG1 259 aa17.58■□□□□ 0.4
FNDC1-201ENST00000297267 GBP3Q9H0R5 595 aa17.58■□□□□ 0.4
FNDC1-201ENST00000297267 FGFR1OPO95684 399 aaKnown RBP17.58■□□□□ 0.4
FNDC1-201ENST00000297267 GSDMDP57764 484 aa17.58■□□□□ 0.4
FNDC1-201ENST00000297267 CCDC152Q4G0S7 254 aa17.58■□□□□ 0.4
FNDC1-201ENST00000297267 MRPS27Q92552 414 aaKnown RBP17.58■□□□□ 0.4
FNDC1-201ENST00000297267 HOMER2Q9NSB8 354 aa17.58■□□□□ 0.4
FNDC1-201ENST00000297267 ATP8B2P98198 1209 aa17.58■□□□□ 0.4
FNDC1-201ENST00000297267 FAM89AQ96GI7 184 aa17.58■□□□□ 0.4
FNDC1-201ENST00000297267 VPS16Q9H269 839 aa17.57■□□□□ 0.4
FNDC1-201ENST00000297267 KIF5BP33176 963 aa17.57■□□□□ 0.4
FNDC1-201ENST00000297267 CDC5LQ99459 802 aaKnown RBP17.57■□□□□ 0.4
FNDC1-201ENST00000297267 CCDC175P0C221 793 aa17.57■□□□□ 0.4
FNDC1-201ENST00000297267 OTUD6BQ8N6M0 293 aa17.57■□□□□ 0.4
FNDC1-201ENST00000297267 EDC3Q96F86 508 aaKnown RBP17.57■□□□□ 0.4
FNDC1-201ENST00000297267 ABCC11Q96J66 1382 aa17.57■□□□□ 0.4
FNDC1-201ENST00000297267 MICALL1Q8N3F8 863 aa17.57■□□□□ 0.4
FNDC1-201ENST00000297267 ATRIPQ8WXE1 791 aa17.57■□□□□ 0.4
FNDC1-201ENST00000297267 C14orf93Q9H972 538 aaKnown RBP17.57■□□□□ 0.4
FNDC1-201ENST00000297267 PRKG1Q13976 671 aa17.56■□□□□ 0.4
FNDC1-201ENST00000297267 DZIP3Q86Y13 1208 aaKnown RBP17.56■□□□□ 0.4
FNDC1-201ENST00000297267 SETDB2Q96T68 719 aa17.56■□□□□ 0.4
FNDC1-201ENST00000297267 POLKQ9UBT6 870 aa17.56■□□□□ 0.4
FNDC1-201ENST00000297267 MXRA7P84157 204 aa17.56■□□□□ 0.4
FNDC1-201ENST00000297267 HDAC1Q13547 482 aaPredicted RBP17.56■□□□□ 0.4
FNDC1-201ENST00000297267 CCDC63Q8NA47 563 aa17.56■□□□□ 0.4
FNDC1-201ENST00000297267 PRDM1O75626 825 aa17.56■□□□□ 0.4
FNDC1-201ENST00000297267 PHKBQ93100 1093 aa17.56■□□□□ 0.4
FNDC1-201ENST00000297267 ERCC5P28715 1186 aaPredicted RBP17.56■□□□□ 0.4
FNDC1-201ENST00000297267 AMPD3Q01432 767 aa17.56■□□□□ 0.4
FNDC1-201ENST00000297267 RPRD2Q5VT52 1461 aaKnown RBP17.56■□□□□ 0.4
FNDC1-201ENST00000297267 TLDC2A0PJX2 215 aa17.56■□□□□ 0.4
FNDC1-201ENST00000297267 TFCP2L1Q9NZI6 479 aa17.56■□□□□ 0.4
FNDC1-201ENST00000297267 SPTLC2O15270 562 aa17.56■□□□□ 0.4
FNDC1-201ENST00000297267 KRT2P35908 639 aa17.56■□□□□ 0.4
FNDC1-201ENST00000297267 ANKRD44Q8N8A2 993 aa17.56■□□□□ 0.4
FNDC1-201ENST00000297267 ST5P78524 1137 aa17.55■□□□□ 0.4
FNDC1-201ENST00000297267 RAB3GAP1Q15042 981 aa17.55■□□□□ 0.4
FNDC1-201ENST00000297267 GDAP1L1Q96MZ0 367 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms