RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 NYAP1Q6ZVC0 841 aa32.16■■■□□ 2.74
CBX4-201ENST00000269397 KBTBD3Q8NAB2 608 aa32.16■■■□□ 2.74
CBX4-201ENST00000269397 A0A087WZG4 1122 aa32.15■■■□□ 2.74
CBX4-201ENST00000269397 A0A1B0GVL5 298 aa32.15■■■□□ 2.74
CBX4-201ENST00000269397 SYTL4Q96C24 671 aaPredicted RBP32.15■■■□□ 2.74
CBX4-201ENST00000269397 DDX41Q9UJV9 622 aaKnown RBP32.14■■■□□ 2.74
CBX4-201ENST00000269397 NPHP1O15259 732 aa32.14■■■□□ 2.74
CBX4-201ENST00000269397 CEP57L1Q8IYX8 460 aa32.14■■■□□ 2.74
CBX4-201ENST00000269397 ZNF396Q96N95 335 aaPredicted RBP32.14■■■□□ 2.74
CBX4-201ENST00000269397 SDF4Q9BRK5 362 aa32.14■■■□□ 2.74
CBX4-201ENST00000269397 GPHNQ9NQX3 736 aaPredicted RBP32.13■■■□□ 2.73
CBX4-201ENST00000269397 PCDHA7Q9UN72 937 aa32.13■■■□□ 2.73
CBX4-201ENST00000269397 NEMFO60524 1076 aa32.13■■■□□ 2.73
CBX4-201ENST00000269397 TIMM10P62072 90 aa32.13■■■□□ 2.73
CBX4-201ENST00000269397 CCAR2Q8N163 923 aaKnown RBP32.13■■■□□ 2.73
CBX4-201ENST00000269397 OVOS2A0A0G2JMS6 1433 aa32.12■■■□□ 2.73
CBX4-201ENST00000269397 E7EWF7 191 aa32.12■■■□□ 2.73
CBX4-201ENST00000269397 EXOSC10Q01780 885 aaKnown RBP32.12■■■□□ 2.73
CBX4-201ENST00000269397 LMBR1LQ6UX01 489 aa32.12■■■□□ 2.73
CBX4-201ENST00000269397 SLC52A2Q9HAB3 445 aa32.12■■■□□ 2.73
CBX4-201ENST00000269397 KIF20AO95235 890 aa32.12■■■□□ 2.73
CBX4-201ENST00000269397 HMGB1P09429 215 aaKnown RBP32.12■■■□□ 2.73
CBX4-201ENST00000269397 KMT5BQ4FZB7 885 aa32.12■■■□□ 2.73
CBX4-201ENST00000269397 TTLL5Q6EMB2 1281 aa32.12■■■□□ 2.73
CBX4-201ENST00000269397 KIF18AQ8NI77 898 aa32.12■■■□□ 2.73
CBX4-201ENST00000269397 PDIA3P30101 505 aaKnown RBP32.11■■■□□ 2.73
CBX4-201ENST00000269397 LAMA4Q16363 1823 aa32.11■■■□□ 2.73
CBX4-201ENST00000269397 NBPF11Q86T75 865 aa32.11■■■□□ 2.73
CBX4-201ENST00000269397 PAG1Q9NWQ8 432 aa32.11■■■□□ 2.73
CBX4-201ENST00000269397 ELF2Q15723 593 aa32.1■■■□□ 2.73
CBX4-201ENST00000269397 ZNF771Q7L3S4 317 aaPredicted RBP32.1■■■□□ 2.73
CBX4-201ENST00000269397 FMNL2Q96PY5 1086 aa32.1■■■□□ 2.73
CBX4-201ENST00000269397 C5P01031 1676 aa32.1■■■□□ 2.73
CBX4-201ENST00000269397 NDUFA8P51970 172 aa32.1■■■□□ 2.73
CBX4-201ENST00000269397 ZC3H6P61129 1189 aaKnown RBP32.1■■■□□ 2.73
CBX4-201ENST00000269397 BIN1O00499 593 aa32.09■■■□□ 2.73
CBX4-201ENST00000269397 POLR3DP05423 398 aaPredicted RBP32.09■■■□□ 2.73
CBX4-201ENST00000269397 DPCR1Q3MIW9 517 aa32.09■■■□□ 2.73
CBX4-201ENST00000269397 RABL6Q3YEC7 729 aaPredicted RBP32.09■■■□□ 2.73
CBX4-201ENST00000269397 SH3TC1Q8TE82 1336 aa32.09■■■□□ 2.73
CBX4-201ENST00000269397 HSPD1P10809 573 aaKnown RBP32.09■■■□□ 2.73
CBX4-201ENST00000269397 FMR1NBQ8N0W7 255 aaPredicted RBP32.09■■■□□ 2.73
CBX4-201ENST00000269397 SALL1Q9NSC2 1324 aa32.08■■■□□ 2.73
CBX4-201ENST00000269397 LRP10Q7Z4F1 713 aa32.08■■■□□ 2.73
CBX4-201ENST00000269397 RAB11FIP4Q86YS3 637 aa32.08■■■□□ 2.73
CBX4-201ENST00000269397 MRPS27Q92552 414 aaKnown RBP32.08■■■□□ 2.73
CBX4-201ENST00000269397 SIPA1L3O60292 1781 aaPredicted RBP32.08■■■□□ 2.73
CBX4-201ENST00000269397 MYH15Q9Y2K3 1946 aa32.08■■■□□ 2.73
CBX4-201ENST00000269397 FDPSP14324 419 aaKnown RBP32.08■■■□□ 2.73
CBX4-201ENST00000269397 CARMIL3Q8ND23 1372 aa32.07■■■□□ 2.73
CBX4-201ENST00000269397 GJB4Q9NTQ9 266 aa32.07■■■□□ 2.72
CBX4-201ENST00000269397 CLIC4Q9Y696 253 aa32.07■■■□□ 2.72
CBX4-201ENST00000269397 SMC2O95347 1197 aa32.06■■■□□ 2.72
CBX4-201ENST00000269397 NLRP2Q9NX02 1062 aa32.06■■■□□ 2.72
CBX4-201ENST00000269397 TAOK2Q9UL54 1235 aa32.06■■■□□ 2.72
CBX4-201ENST00000269397 RFX7Q2KHR2 1363 aa32.06■■■□□ 2.72
CBX4-201ENST00000269397 SF3A1Q15459 793 aaKnown RBP32.05■■■□□ 2.72
CBX4-201ENST00000269397 FBXO38Q6PIJ6 1188 aa32.05■■■□□ 2.72
CBX4-201ENST00000269397 RAPGEF4Q8WZA2 1011 aa32.05■■■□□ 2.72
CBX4-201ENST00000269397 AGXT2Q9BYV1 514 aa32.05■■■□□ 2.72
CBX4-201ENST00000269397 NAT10Q9H0A0 1025 aaKnown RBP32.05■■■□□ 2.72
CBX4-201ENST00000269397 XPO4Q9C0E2 1151 aaKnown RBP32.05■■■□□ 2.72
CBX4-201ENST00000269397 KDM6AO15550 1401 aaPredicted RBP32.05■■■□□ 2.72
CBX4-201ENST00000269397 DSCC1Q9BVC3 393 aa32.04■■■□□ 2.72
CBX4-201ENST00000269397 IFNKQ9P0W0 207 aa32.04■■■□□ 2.72
CBX4-201ENST00000269397 MORC2Q9Y6X9 1032 aaPredicted RBP32.04■■■□□ 2.72
CBX4-201ENST00000269397 HAND2P61296 217 aa32.04■■■□□ 2.72
CBX4-201ENST00000269397 ISM2Q6H9L7 571 aa32.04■■■□□ 2.72
CBX4-201ENST00000269397 TMC6Q7Z403 805 aa32.04■■■□□ 2.72
CBX4-201ENST00000269397 ZNF397Q8NF99 534 aaPredicted RBP32.04■■■□□ 2.72
CBX4-201ENST00000269397 HELLSQ9NRZ9 838 aa32.03■■■□□ 2.72
CBX4-201ENST00000269397 MAST3O60307 1309 aa32.03■■■□□ 2.72
CBX4-201ENST00000269397 STK38Q15208 465 aa32.03■■■□□ 2.72
CBX4-201ENST00000269397 ZRSR1Q15695 479 aaKnown RBP32.03■■■□□ 2.72
CBX4-201ENST00000269397 ZMYM1Q5SVZ6 1142 aa32.03■■■□□ 2.72
CBX4-201ENST00000269397 E4F1Q66K89 784 aaPredicted RBP32.03■■■□□ 2.72
CBX4-201ENST00000269397 TTC5Q8N0Z6 440 aa32.03■■■□□ 2.72
CBX4-201ENST00000269397 ADALQ6DHV7 355 aa32.02■■■□□ 2.72
CBX4-201ENST00000269397 ATG9AQ7Z3C6 839 aa32.02■■■□□ 2.72
CBX4-201ENST00000269397 KIAA1468Q9P260 1216 aa32.02■■■□□ 2.72
CBX4-201ENST00000269397 ERBB3P21860 1342 aa32.02■■■□□ 2.72
CBX4-201ENST00000269397 SNRPA1P09661 255 aaKnown RBP32.02■■■□□ 2.72
CBX4-201ENST00000269397 ATL3Q6DD88 541 aa32.02■■■□□ 2.72
CBX4-201ENST00000269397 ZNF594Q96JF6 807 aaPredicted RBP32.02■■■□□ 2.72
CBX4-201ENST00000269397 M0R2C6 588 aa32.01■■■□□ 2.71
CBX4-201ENST00000269397 ARMCX5Q6P1M9 558 aa32.01■■■□□ 2.71
CBX4-201ENST00000269397 LINC00301Q8NCQ3 95 aa32.01■■■□□ 2.71
CBX4-201ENST00000269397 RTEL1Q9NZ71 1219 aa32.01■■■□□ 2.71
CBX4-201ENST00000269397 PHKG2P15735 406 aa32.01■■■□□ 2.71
CBX4-201ENST00000269397 CASP7P55210 303 aa32.01■■■□□ 2.71
CBX4-201ENST00000269397 LRRN4CLQ8ND94 238 aa32.01■■■□□ 2.71
CBX4-201ENST00000269397 ZNF274Q96GC6 653 aaPredicted RBP32.01■■■□□ 2.71
CBX4-201ENST00000269397 ERO1AQ96HE7 468 aa32.01■■■□□ 2.71
CBX4-201ENST00000269397 PALLDQ8WX93 1383 aa32■■■□□ 2.71
CBX4-201ENST00000269397 SLU7O95391 586 aaKnown RBP32■■■□□ 2.71
CBX4-201ENST00000269397 GSDMDP57764 484 aa32■■■□□ 2.71
CBX4-201ENST00000269397 LRRC24Q50LG9 513 aa32■■■□□ 2.71
CBX4-201ENST00000269397 PHRF1Q9P1Y6 1649 aaKnown RBP31.99■■■□□ 2.71
CBX4-201ENST00000269397 AFDNP55196 1824 aaKnown RBP31.99■■■□□ 2.71
CBX4-201ENST00000269397 SYT10Q6XYQ8 523 aa31.99■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms