RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 RNF113AO15541 343 aaKnown RBP24.7■■□□□ 1.55
LYSMD2-201ENST00000267838 LRRFIP1Q32MZ4 808 aaKnown RBP24.7■■□□□ 1.55
LYSMD2-201ENST00000267838 PRPF40BQ6NWY9 871 aaKnown RBP24.7■■□□□ 1.55
LYSMD2-201ENST00000267838 SEC62Q99442 399 aaKnown RBP24.7■■□□□ 1.55
LYSMD2-201ENST00000267838 KCNJ4P48050 445 aa24.7■■□□□ 1.54
LYSMD2-201ENST00000267838 ZMYM1Q5SVZ6 1142 aa24.7■■□□□ 1.54
LYSMD2-201ENST00000267838 PI16Q6UXB8 463 aa24.7■■□□□ 1.54
LYSMD2-201ENST00000267838 CELF1Q92879 486 aaKnown RBP24.7■■□□□ 1.54
LYSMD2-201ENST00000267838 SNAP23O00161 211 aa24.69■■□□□ 1.54
LYSMD2-201ENST00000267838 HSP90AA1P07900 732 aaKnown RBP24.69■■□□□ 1.54
LYSMD2-201ENST00000267838 CNBD1Q8NA66 436 aa24.69■■□□□ 1.54
LYSMD2-201ENST00000267838 CCDC129Q6ZRS4 1044 aa24.68■■□□□ 1.54
LYSMD2-201ENST00000267838 TNS1Q9HBL0 1735 aaKnown RBP24.68■■□□□ 1.54
LYSMD2-201ENST00000267838 MCM2P49736 904 aa24.67■■□□□ 1.54
LYSMD2-201ENST00000267838 CREB3L3Q68CJ9 461 aa24.67■■□□□ 1.54
LYSMD2-201ENST00000267838 UPF3BQ9BZI7 483 aaKnown RBP24.67■■□□□ 1.54
LYSMD2-201ENST00000267838 MYH7P12883 1935 aa24.67■■□□□ 1.54
LYSMD2-201ENST00000267838 ZFYP08048 801 aaPredicted RBP24.67■■□□□ 1.54
LYSMD2-201ENST00000267838 RPS8P62241 208 aaKnown RBP24.67■■□□□ 1.54
LYSMD2-201ENST00000267838 SLFNL1Q499Z3 407 aa24.67■■□□□ 1.54
LYSMD2-201ENST00000267838 MINPP1Q9UNW1 487 aa24.67■■□□□ 1.54
LYSMD2-201ENST00000267838 ZKSCAN1P17029 563 aaPredicted RBP24.66■■□□□ 1.54
LYSMD2-201ENST00000267838 TM4SF1P30408 202 aa24.66■■□□□ 1.54
LYSMD2-201ENST00000267838 TTF1Q15361 905 aaPredicted RBP24.66■■□□□ 1.54
LYSMD2-201ENST00000267838 SLC27A2O14975 620 aa24.65■■□□□ 1.54
LYSMD2-201ENST00000267838 DDIT3P35638 169 aa24.65■■□□□ 1.54
LYSMD2-201ENST00000267838 ZNF827Q17R98 1081 aa24.65■■□□□ 1.54
LYSMD2-201ENST00000267838 PRR5LQ6MZQ0 368 aa24.65■■□□□ 1.54
LYSMD2-201ENST00000267838 AKT1S1Q96B36 256 aa24.65■■□□□ 1.54
LYSMD2-201ENST00000267838 TFCP2L1Q9NZI6 479 aa24.65■■□□□ 1.54
LYSMD2-201ENST00000267838 CHMP5Q9NZZ3 219 aa24.65■■□□□ 1.54
LYSMD2-201ENST00000267838 CYP2E1P05181 493 aaPredicted RBP24.65■■□□□ 1.54
LYSMD2-201ENST00000267838 RNF20Q5VTR2 975 aa24.65■■□□□ 1.54
LYSMD2-201ENST00000267838 UBE4AQ14139 1066 aa24.64■■□□□ 1.53
LYSMD2-201ENST00000267838 FOXD4L1Q9NU39 408 aa24.64■■□□□ 1.53
LYSMD2-201ENST00000267838 HMG20BQ9P0W2 317 aa24.64■■□□□ 1.53
LYSMD2-201ENST00000267838 MAST3O60307 1309 aa24.63■■□□□ 1.53
LYSMD2-201ENST00000267838 RGPD3A6NKT7 1758 aaPredicted RBP24.63■■□□□ 1.53
LYSMD2-201ENST00000267838 RGPD4Q7Z3J3 1758 aa24.63■■□□□ 1.53
LYSMD2-201ENST00000267838 SERPINB2P05120 415 aa24.63■■□□□ 1.53
LYSMD2-201ENST00000267838 TM6SF1Q9BZW5 370 aa24.63■■□□□ 1.53
LYSMD2-201ENST00000267838 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.63■■□□□ 1.53
LYSMD2-201ENST00000267838 BCAMP50895 628 aa24.62■■□□□ 1.53
LYSMD2-201ENST00000267838 SPATA5Q8NB90 893 aa24.62■■□□□ 1.53
LYSMD2-201ENST00000267838 U3KPZ7 1027 aaPredicted RBP24.62■■□□□ 1.53
LYSMD2-201ENST00000267838 M0R2C6 588 aa24.62■■□□□ 1.53
LYSMD2-201ENST00000267838 CASTP20810 708 aaKnown RBP24.62■■□□□ 1.53
LYSMD2-201ENST00000267838 ST5P78524 1137 aa24.62■■□□□ 1.53
LYSMD2-201ENST00000267838 RASGRF1Q13972 1273 aa24.62■■□□□ 1.53
LYSMD2-201ENST00000267838 ADCK5Q3MIX3 580 aa24.62■■□□□ 1.53
LYSMD2-201ENST00000267838 L1TD1Q5T7N2 865 aaKnown RBP24.62■■□□□ 1.53
LYSMD2-201ENST00000267838 ZSCAN25Q6NSZ9 544 aa24.62■■□□□ 1.53
LYSMD2-201ENST00000267838 OSBP2Q969R2 916 aa24.62■■□□□ 1.53
LYSMD2-201ENST00000267838 JAKMIP1Q96N16 626 aaKnown RBP24.62■■□□□ 1.53
LYSMD2-201ENST00000267838 PIH1D3Q9NQM4 214 aaKnown RBP24.62■■□□□ 1.53
LYSMD2-201ENST00000267838 BRPF3Q9ULD4 1205 aa24.62■■□□□ 1.53
LYSMD2-201ENST00000267838 WASHC4Q2M389 1173 aa24.61■■□□□ 1.53
LYSMD2-201ENST00000267838 MYO5AQ9Y4I1 1855 aaKnown RBP24.6■■□□□ 1.53
LYSMD2-201ENST00000267838 APPBP2Q92624 585 aa24.6■■□□□ 1.53
LYSMD2-201ENST00000267838 TMX3Q96JJ7 454 aa24.6■■□□□ 1.53
LYSMD2-201ENST00000267838 TTC14Q96N46 770 aa24.6■■□□□ 1.53
LYSMD2-201ENST00000267838 DSCC1Q9BVC3 393 aa24.6■■□□□ 1.53
LYSMD2-201ENST00000267838 ZSWIM6Q9HCJ5 1215 aa24.6■■□□□ 1.53
LYSMD2-201ENST00000267838 CIZ1Q9ULV3 898 aaPredicted RBP24.6■■□□□ 1.53
LYSMD2-201ENST00000267838 DDR1Q08345 913 aa24.59■■□□□ 1.53
LYSMD2-201ENST00000267838 TSGA10IPQ3SY00 556 aa24.59■■□□□ 1.53
LYSMD2-201ENST00000267838 ANKRD2Q9GZV1 360 aa24.59■■□□□ 1.53
LYSMD2-201ENST00000267838 POLRMTO00411 1230 aaKnown RBP24.59■■□□□ 1.53
LYSMD2-201ENST00000267838 COL23A1Q86Y22 540 aaPredicted RBP24.59■■□□□ 1.53
LYSMD2-201ENST00000267838 DOCK2Q92608 1830 aa24.58■■□□□ 1.53
LYSMD2-201ENST00000267838 RPAP1Q9BWH6 1393 aaPredicted RBP24.58■■□□□ 1.53
LYSMD2-201ENST00000267838 PSMA5P28066 241 aa24.58■■□□□ 1.53
LYSMD2-201ENST00000267838 ADD2P35612 726 aa24.58■■□□□ 1.53
LYSMD2-201ENST00000267838 GRAPQ13588 217 aa24.58■■□□□ 1.53
LYSMD2-201ENST00000267838 VPS53Q5VIR6 699 aa24.58■■□□□ 1.53
LYSMD2-201ENST00000267838 FLAD1Q8NFF5 587 aa24.58■■□□□ 1.53
LYSMD2-201ENST00000267838 GRAPLQ8TC17 118 aaPredicted RBP24.58■■□□□ 1.53
LYSMD2-201ENST00000267838 CYP46A1Q9Y6A2 500 aa24.58■■□□□ 1.53
LYSMD2-201ENST00000267838 ZNF804BA4D1E1 1349 aa24.58■■□□□ 1.53
LYSMD2-201ENST00000267838 WTIPA6NIX2 430 aaPredicted RBP24.57■■□□□ 1.52
LYSMD2-201ENST00000267838 IDH1O75874 414 aaKnown RBP24.57■■□□□ 1.52
LYSMD2-201ENST00000267838 SLC9C2Q5TAH2 1124 aa24.57■■□□□ 1.52
LYSMD2-201ENST00000267838 NOL8Q76FK4 1167 aaKnown RBP24.57■■□□□ 1.52
LYSMD2-201ENST00000267838 HSPD1P10809 573 aaKnown RBP24.57■■□□□ 1.52
LYSMD2-201ENST00000267838 CPA1P15085 419 aa24.57■■□□□ 1.52
LYSMD2-201ENST00000267838 RUFY3Q7L099 469 aa24.57■■□□□ 1.52
LYSMD2-201ENST00000267838 MCM4P33991 863 aa24.56■■□□□ 1.52
LYSMD2-201ENST00000267838 GYG1P46976 350 aa24.56■■□□□ 1.52
LYSMD2-201ENST00000267838 UBE3CQ15386 1083 aa24.56■■□□□ 1.52
LYSMD2-201ENST00000267838 CRY2Q49AN0 593 aa24.56■■□□□ 1.52
LYSMD2-201ENST00000267838 CAVIN4Q5BKX8 364 aa24.56■■□□□ 1.52
LYSMD2-201ENST00000267838 RPGRQ92834 1020 aaKnown RBP24.56■■□□□ 1.52
LYSMD2-201ENST00000267838 PUS7LQ9H0K6 701 aaKnown RBP24.56■■□□□ 1.52
LYSMD2-201ENST00000267838 GNL3LQ9NVN8 582 aaKnown RBP24.56■■□□□ 1.52
LYSMD2-201ENST00000267838 TAF6LQ9Y6J9 622 aa24.56■■□□□ 1.52
LYSMD2-201ENST00000267838 AK2P54819 239 aa24.55■■□□□ 1.52
LYSMD2-201ENST00000267838 KRT32Q14532 448 aa24.55■■□□□ 1.52
LYSMD2-201ENST00000267838 NLGN1Q8N2Q7 840 aa24.55■■□□□ 1.52
LYSMD2-201ENST00000267838 PDRG1Q9NUG6 133 aa24.55■■□□□ 1.52
LYSMD2-201ENST00000267838 PDE6AP16499 860 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms