RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 PLEKHO1Q53GL0 409 aaPredicted RBP12.13□□□□□ -0.47
CPT1A-201ENST00000265641 TTC39AQ5SRH9 613 aa12.13□□□□□ -0.47
CPT1A-201ENST00000265641 PLEKHM2Q8IWE5 1019 aa12.13□□□□□ -0.47
CPT1A-201ENST00000265641 CCHCR1Q8TD31 782 aa12.13□□□□□ -0.47
CPT1A-201ENST00000265641 LMBR1Q8WVP7 490 aa12.13□□□□□ -0.47
CPT1A-201ENST00000265641 STMN2Q93045 179 aa12.13□□□□□ -0.47
CPT1A-201ENST00000265641 RAB3IPQ96QF0 476 aaPredicted RBP12.13□□□□□ -0.47
CPT1A-201ENST00000265641 SH3GL3Q99963 347 aa12.13□□□□□ -0.47
CPT1A-201ENST00000265641 NUCKS1Q9H1E3 243 aaKnown RBP12.13□□□□□ -0.47
CPT1A-201ENST00000265641 ABCC2Q92887 1545 aa12.13□□□□□ -0.47
CPT1A-201ENST00000265641 ARMC9Q7Z3E5 817 aa12.13□□□□□ -0.47
CPT1A-201ENST00000265641 C17orf53Q8N3J3 647 aaPredicted RBP12.13□□□□□ -0.47
CPT1A-201ENST00000265641 RAPGEF4Q8WZA2 1011 aa12.13□□□□□ -0.47
CPT1A-201ENST00000265641 UTP14AQ9BVJ6 771 aaKnown RBP12.13□□□□□ -0.47
CPT1A-201ENST00000265641 PHLPP2Q6ZVD8 1323 aa12.12□□□□□ -0.47
CPT1A-201ENST00000265641 ETF1P62495 437 aaKnown RBP12.12□□□□□ -0.47
CPT1A-201ENST00000265641 MTMR3Q13615 1198 aa12.12□□□□□ -0.47
CPT1A-201ENST00000265641 PHLDB2Q86SQ0 1253 aa12.12□□□□□ -0.47
CPT1A-201ENST00000265641 VPS37DQ86XT2 251 aa12.12□□□□□ -0.47
CPT1A-201ENST00000265641 SMC6Q96SB8 1091 aa12.12□□□□□ -0.47
CPT1A-201ENST00000265641 NAP1L3Q99457 506 aaPredicted RBP12.12□□□□□ -0.47
CPT1A-201ENST00000265641 BOLA2Q9H3K6 86 aa12.12□□□□□ -0.47
CPT1A-201ENST00000265641 MAGI3Q5TCQ9 1506 aa12.12□□□□□ -0.47
CPT1A-201ENST00000265641 DCAF8L1A6NGE4 600 aa12.12□□□□□ -0.47
CPT1A-201ENST00000265641 LRRC23Q53EV4 343 aaPredicted RBP12.12□□□□□ -0.47
CPT1A-201ENST00000265641 CEP128Q6ZU80 1094 aa12.12□□□□□ -0.47
CPT1A-201ENST00000265641 IFT20Q8IY31 132 aa12.12□□□□□ -0.47
CPT1A-201ENST00000265641 ARHGAP24Q8N264 748 aa12.12□□□□□ -0.47
CPT1A-201ENST00000265641 GBP5Q96PP8 586 aa12.12□□□□□ -0.47
CPT1A-201ENST00000265641 SATB1Q01826 763 aa12.12□□□□□ -0.47
CPT1A-201ENST00000265641 FAM160A1Q05DH4 1040 aa12.12□□□□□ -0.47
CPT1A-201ENST00000265641 INTS8Q75QN2 995 aaKnown RBP12.12□□□□□ -0.47
CPT1A-201ENST00000265641 CHUKO15111 745 aa12.12□□□□□ -0.47
CPT1A-201ENST00000265641 TSHZ3Q63HK5 1081 aa12.12□□□□□ -0.47
CPT1A-201ENST00000265641 CERS3Q8IU89 383 aa12.12□□□□□ -0.47
CPT1A-201ENST00000265641 RNF10Q8N5U6 811 aaKnown RBP12.12□□□□□ -0.47
CPT1A-201ENST00000265641 NECAB1Q8N987 351 aa12.12□□□□□ -0.47
CPT1A-201ENST00000265641 CAPS2Q9BXY5 557 aa12.12□□□□□ -0.47
CPT1A-201ENST00000265641 SPINK5Q9NQ38 1064 aaPredicted RBP12.12□□□□□ -0.47
CPT1A-201ENST00000265641 GSTTP1A0A1W2PQM5 241 aa12.11□□□□□ -0.47
CPT1A-201ENST00000265641 MXRA7P84157 204 aa12.11□□□□□ -0.47
CPT1A-201ENST00000265641 MCM10Q7L590 875 aa12.11□□□□□ -0.47
CPT1A-201ENST00000265641 NUTM2AQ8IVF1 878 aaPredicted RBP12.11□□□□□ -0.47
CPT1A-201ENST00000265641 MBIPQ9NS73 344 aa12.11□□□□□ -0.47
CPT1A-201ENST00000265641 CCDC160A6NGH7 325 aa12.11□□□□□ -0.47
CPT1A-201ENST00000265641 KRT18P05783 430 aaKnown RBP12.11□□□□□ -0.47
CPT1A-201ENST00000265641 KIAA0753Q2KHM9 967 aa12.11□□□□□ -0.47
CPT1A-201ENST00000265641 PLVAPQ9BX97 442 aa12.11□□□□□ -0.47
CPT1A-201ENST00000265641 BLMP54132 1417 aaPredicted RBP12.11□□□□□ -0.47
CPT1A-201ENST00000265641 RRS1Q15050 365 aaKnown RBP12.11□□□□□ -0.47
CPT1A-201ENST00000265641 TADA2BQ86TJ2 420 aa12.11□□□□□ -0.47
CPT1A-201ENST00000265641 HOOK3Q86VS8 718 aa12.11□□□□□ -0.47
CPT1A-201ENST00000265641 TSC1Q92574 1164 aa12.11□□□□□ -0.47
CPT1A-201ENST00000265641 CCDC51Q96ER9 411 aa12.11□□□□□ -0.47
CPT1A-201ENST00000265641 SPTLC3Q9NUV7 552 aa12.11□□□□□ -0.47
CPT1A-201ENST00000265641 RAD51AP2Q09MP3 1159 aa12.11□□□□□ -0.47
CPT1A-201ENST00000265641 TRIM6Q9C030 488 aaPredicted RBP12.11□□□□□ -0.47
CPT1A-201ENST00000265641 RASSF2P50749 326 aa12.1□□□□□ -0.47
CPT1A-201ENST00000265641 ERCC6LQ2NKX8 1250 aa12.1□□□□□ -0.47
CPT1A-201ENST00000265641 PRM3Q9NNZ6 103 aa12.1□□□□□ -0.47
CPT1A-201ENST00000265641 PLCB1Q9NQ66 1216 aa12.1□□□□□ -0.47
CPT1A-201ENST00000265641 TSKSQ9UJT2 592 aa12.1□□□□□ -0.47
CPT1A-201ENST00000265641 ABCA8O94911 1581 aa12.1□□□□□ -0.47
CPT1A-201ENST00000265641 LIG3P49916 1009 aa12.1□□□□□ -0.47
CPT1A-201ENST00000265641 PAK2Q13177 524 aa12.1□□□□□ -0.47
CPT1A-201ENST00000265641 C16orf71Q8IYS4 520 aaPredicted RBP12.1□□□□□ -0.47
CPT1A-201ENST00000265641 CCDC110Q8TBZ0 833 aa12.1□□□□□ -0.47
CPT1A-201ENST00000265641 PDLIM2Q96JY6 352 aa12.1□□□□□ -0.47
CPT1A-201ENST00000265641 CCDC43Q96MW1 224 aaKnown RBP12.1□□□□□ -0.47
CPT1A-201ENST00000265641 CCDC151A5D8V7 595 aa12.1□□□□□ -0.47
CPT1A-201ENST00000265641 TDRD12Q587J7 1177 aaKnown RBP12.1□□□□□ -0.47
CPT1A-201ENST00000265641 MRPL50Q8N5N7 158 aaKnown RBP12.1□□□□□ -0.47
CPT1A-201ENST00000265641 CWC25Q9NXE8 425 aaPredicted RBP12.1□□□□□ -0.47
CPT1A-201ENST00000265641 FAM135AQ9P2D6 1515 aa12.1□□□□□ -0.47
CPT1A-201ENST00000265641 AKR1B10O60218 316 aa12.1□□□□□ -0.47
CPT1A-201ENST00000265641 CIB2O75838 187 aa12.1□□□□□ -0.47
CPT1A-201ENST00000265641 SSBP05455 408 aaKnown RBP eCLIP12.1□□□□□ -0.47
CPT1A-201ENST00000265641 BRAPQ7Z569 592 aa12.1□□□□□ -0.47
CPT1A-201ENST00000265641 GBP7Q8N8V2 638 aaPredicted RBP12.1□□□□□ -0.47
CPT1A-201ENST00000265641 NEK1Q96PY6 1258 aa12.1□□□□□ -0.47
CPT1A-201ENST00000265641 AMPD3Q01432 767 aa12.09□□□□□ -0.47
CPT1A-201ENST00000265641 UBE4AQ14139 1066 aa12.09□□□□□ -0.47
CPT1A-201ENST00000265641 CCDC96Q2M329 555 aa12.09□□□□□ -0.47
CPT1A-201ENST00000265641 TESK2Q96S53 571 aa12.09□□□□□ -0.47
CPT1A-201ENST00000265641 PSMD1Q99460 953 aa12.09□□□□□ -0.47
CPT1A-201ENST00000265641 TCEAL9Q9UHQ7 104 aa12.09□□□□□ -0.47
CPT1A-201ENST00000265641 RTEL1-TNFRSF6BF6WH68 1400 aa12.09□□□□□ -0.47
CPT1A-201ENST00000265641 UHRF1BP1Q6BDS2 1440 aa12.09□□□□□ -0.47
CPT1A-201ENST00000265641 MTIF2P46199 727 aaKnown RBP12.09□□□□□ -0.47
CPT1A-201ENST00000265641 SLC20A2Q08357 652 aa12.09□□□□□ -0.47
CPT1A-201ENST00000265641 FLIIQ13045 1269 aa12.09□□□□□ -0.47
CPT1A-201ENST00000265641 WWC2Q6AWC2 1192 aa12.09□□□□□ -0.47
CPT1A-201ENST00000265641 RAB11FIP4Q86YS3 637 aa12.09□□□□□ -0.47
CPT1A-201ENST00000265641 TMTC1Q8IUR5 882 aa12.09□□□□□ -0.47
CPT1A-201ENST00000265641 DTNBP1Q96EV8 351 aa12.09□□□□□ -0.47
CPT1A-201ENST00000265641 LRRC27Q9C0I9 530 aa12.09□□□□□ -0.47
CPT1A-201ENST00000265641 MTRF1LQ9UGC7 380 aaKnown RBP12.09□□□□□ -0.47
CPT1A-201ENST00000265641 HIP1RO75146 1068 aa12.09□□□□□ -0.47
CPT1A-201ENST00000265641 CCT2P78371 535 aaKnown RBP12.09□□□□□ -0.47
CPT1A-201ENST00000265641 DYNC1I2Q13409 638 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms