RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 NFATC2IPQ8NCF5 419 aa20.41■□□□□ 0.86
TRAM1-201ENST00000262213 ZNF396Q96N95 335 aaPredicted RBP20.41■□□□□ 0.86
TRAM1-201ENST00000262213 COPRSQ9NQ92 184 aa20.41■□□□□ 0.86
TRAM1-201ENST00000262213 DDX41Q9UJV9 622 aaKnown RBP20.41■□□□□ 0.86
TRAM1-201ENST00000262213 KIF20AO95235 890 aa20.4■□□□□ 0.86
TRAM1-201ENST00000262213 SMC2O95347 1197 aa20.4■□□□□ 0.86
TRAM1-201ENST00000262213 RFX5P48382 616 aaPredicted RBP20.4■□□□□ 0.86
TRAM1-201ENST00000262213 KMT5BQ4FZB7 885 aa20.4■□□□□ 0.86
TRAM1-201ENST00000262213 NAA16Q6N069 864 aaPredicted RBP20.4■□□□□ 0.86
TRAM1-201ENST00000262213 ANKRD13DQ6ZTN6 518 aa20.4■□□□□ 0.86
TRAM1-201ENST00000262213 KIF18AQ8NI77 898 aa20.4■□□□□ 0.86
TRAM1-201ENST00000262213 RBM6P78332 1123 aaKnown RBP20.4■□□□□ 0.86
TRAM1-201ENST00000262213 HAUS7Q99871 368 aa20.4■□□□□ 0.86
TRAM1-201ENST00000262213 GPHNQ9NQX3 736 aaPredicted RBP20.4■□□□□ 0.86
TRAM1-201ENST00000262213 A0A087WZG4 1122 aa20.4■□□□□ 0.86
TRAM1-201ENST00000262213 ZRSR1Q15695 479 aaKnown RBP20.4■□□□□ 0.86
TRAM1-201ENST00000262213 CCAR2Q8N163 923 aaKnown RBP20.4■□□□□ 0.86
TRAM1-201ENST00000262213 NEMFO60524 1076 aa20.39■□□□□ 0.85
TRAM1-201ENST00000262213 POLR3DP05423 398 aaPredicted RBP20.39■□□□□ 0.85
TRAM1-201ENST00000262213 SF3A1Q15459 793 aaKnown RBP20.39■□□□□ 0.85
TRAM1-201ENST00000262213 NYAP1Q6ZVC0 841 aa20.39■□□□□ 0.85
TRAM1-201ENST00000262213 ILDR1Q86SU0 546 aaPredicted RBP20.39■□□□□ 0.85
TRAM1-201ENST00000262213 ENGASEQ8NFI3 743 aa20.39■□□□□ 0.85
TRAM1-201ENST00000262213 LLPHQ9BRT6 129 aaKnown RBP20.39■□□□□ 0.85
TRAM1-201ENST00000262213 PCDHA7Q9UN72 937 aa20.39■□□□□ 0.85
TRAM1-201ENST00000262213 TIMM10P62072 90 aa20.39■□□□□ 0.85
TRAM1-201ENST00000262213 TTLL5Q6EMB2 1281 aa20.39■□□□□ 0.85
TRAM1-201ENST00000262213 ISM2Q6H9L7 571 aa20.39■□□□□ 0.85
TRAM1-201ENST00000262213 ZNF496Q96IT1 587 aaPredicted RBP20.39■□□□□ 0.85
TRAM1-201ENST00000262213 LMBR1LQ6UX01 489 aa20.38■□□□□ 0.85
TRAM1-201ENST00000262213 KBTBD3Q8NAB2 608 aa20.38■□□□□ 0.85
TRAM1-201ENST00000262213 E7EWF7 191 aa20.37■□□□□ 0.85
TRAM1-201ENST00000262213 NDUFA8P51970 172 aa20.37■□□□□ 0.85
TRAM1-201ENST00000262213 DPCR1Q3MIW9 517 aa20.37■□□□□ 0.85
TRAM1-201ENST00000262213 TMC6Q7Z403 805 aa20.37■□□□□ 0.85
TRAM1-201ENST00000262213 ARHGEF25Q86VW2 580 aa20.37■□□□□ 0.85
TRAM1-201ENST00000262213 ORAI2Q96SN7 254 aa20.37■□□□□ 0.85
TRAM1-201ENST00000262213 ZC3H6P61129 1189 aaKnown RBP20.37■□□□□ 0.85
TRAM1-201ENST00000262213 FBXO38Q6PIJ6 1188 aa20.37■□□□□ 0.85
TRAM1-201ENST00000262213 MRPS27Q92552 414 aaKnown RBP20.37■□□□□ 0.85
TRAM1-201ENST00000262213 GJB4Q9NTQ9 266 aa20.37■□□□□ 0.85
TRAM1-201ENST00000262213 IFNKQ9P0W0 207 aa20.37■□□□□ 0.85
TRAM1-201ENST00000262213 PDIA3P30101 505 aaKnown RBP20.36■□□□□ 0.85
TRAM1-201ENST00000262213 STK38Q15208 465 aa20.36■□□□□ 0.85
TRAM1-201ENST00000262213 ZNF397Q8NF99 534 aaPredicted RBP20.36■□□□□ 0.85
TRAM1-201ENST00000262213 NAT10Q9H0A0 1025 aaKnown RBP20.36■□□□□ 0.85
TRAM1-201ENST00000262213 PAG1Q9NWQ8 432 aa20.36■□□□□ 0.85
TRAM1-201ENST00000262213 HMGB1P09429 215 aaKnown RBP20.36■□□□□ 0.85
TRAM1-201ENST00000262213 HAND2P61296 217 aa20.36■□□□□ 0.85
TRAM1-201ENST00000262213 NBPF11Q86T75 865 aa20.36■□□□□ 0.85
TRAM1-201ENST00000262213 XPO4Q9C0E2 1151 aaKnown RBP20.36■□□□□ 0.85
TRAM1-201ENST00000262213 CLIC4Q9Y696 253 aa20.36■□□□□ 0.85
TRAM1-201ENST00000262213 NCAPD2Q15021 1401 aa20.36■□□□□ 0.85
TRAM1-201ENST00000262213 NLRP2Q9NX02 1062 aa20.35■□□□□ 0.85
TRAM1-201ENST00000262213 HSPD1P10809 573 aaKnown RBP20.34■□□□□ 0.85
TRAM1-201ENST00000262213 GORABQ5T7V8 394 aa20.34■□□□□ 0.85
TRAM1-201ENST00000262213 FMR1NBQ8N0W7 255 aaPredicted RBP20.34■□□□□ 0.85
TRAM1-201ENST00000262213 EXOSC10Q01780 885 aaKnown RBP20.34■□□□□ 0.85
TRAM1-201ENST00000262213 SYT10Q6XYQ8 523 aa20.34■□□□□ 0.85
TRAM1-201ENST00000262213 ST7Q9NRC1 585 aa20.34■□□□□ 0.85
TRAM1-201ENST00000262213 MORC2Q9Y6X9 1032 aaPredicted RBP20.34■□□□□ 0.85
TRAM1-201ENST00000262213 CARMIL3Q8ND23 1372 aa20.34■□□□□ 0.85
TRAM1-201ENST00000262213 SLU7O95391 586 aaKnown RBP20.34■□□□□ 0.85
TRAM1-201ENST00000262213 LRRN4CLQ8ND94 238 aa20.34■□□□□ 0.85
TRAM1-201ENST00000262213 ERO1AQ96HE7 468 aa20.34■□□□□ 0.85
TRAM1-201ENST00000262213 LAMA4Q16363 1823 aa20.33■□□□□ 0.85
TRAM1-201ENST00000262213 FDPSP14324 419 aaKnown RBP20.33■□□□□ 0.85
TRAM1-201ENST00000262213 KRT222Q8N1A0 295 aa20.33■□□□□ 0.85
TRAM1-201ENST00000262213 SLC52A2Q9HAB3 445 aa20.33■□□□□ 0.85
TRAM1-201ENST00000262213 USP54Q70EL1 1684 aa20.33■□□□□ 0.84
TRAM1-201ENST00000262213 HSP90AB3PQ58FF7 597 aa20.33■□□□□ 0.84
TRAM1-201ENST00000262213 RAPGEF4Q8WZA2 1011 aa20.33■□□□□ 0.84
TRAM1-201ENST00000262213 SH3TC1Q8TE82 1336 aa20.32■□□□□ 0.84
TRAM1-201ENST00000262213 A0A0U1RQG5 324 aaPredicted RBP20.32■□□□□ 0.84
TRAM1-201ENST00000262213 E4F1Q66K89 784 aaPredicted RBP20.32■□□□□ 0.84
TRAM1-201ENST00000262213 TTC5Q8N0Z6 440 aa20.32■□□□□ 0.84
TRAM1-201ENST00000262213 ZNF594Q96JF6 807 aaPredicted RBP20.32■□□□□ 0.84
TRAM1-201ENST00000262213 PTPN21Q16825 1174 aa20.32■□□□□ 0.84
TRAM1-201ENST00000262213 ERCC6LQ2NKX8 1250 aa20.32■□□□□ 0.84
TRAM1-201ENST00000262213 ARMCX5Q6P1M9 558 aa20.32■□□□□ 0.84
TRAM1-201ENST00000262213 MRC1P22897 1456 aa20.31■□□□□ 0.84
TRAM1-201ENST00000262213 LMOD1P29536 600 aaPredicted RBP20.31■□□□□ 0.84
TRAM1-201ENST00000262213 GSDMDP57764 484 aa20.31■□□□□ 0.84
TRAM1-201ENST00000262213 KIAA1468Q9P260 1216 aa20.31■□□□□ 0.84
TRAM1-201ENST00000262213 MYH15Q9Y2K3 1946 aa20.31■□□□□ 0.84
TRAM1-201ENST00000262213 SLFN14P0C7P3 912 aa20.31■□□□□ 0.84
TRAM1-201ENST00000262213 C8orf76Q96K31 380 aa20.31■□□□□ 0.84
TRAM1-201ENST00000262213 PPP1R13BQ96KQ4 1090 aa20.31■□□□□ 0.84
TRAM1-201ENST00000262213 MAST3O60307 1309 aa20.31■□□□□ 0.84
TRAM1-201ENST00000262213 ERBB3P21860 1342 aa20.31■□□□□ 0.84
TRAM1-201ENST00000262213 M0R2C6 588 aa20.3■□□□□ 0.84
TRAM1-201ENST00000262213 SFPQP23246 707 aaKnown RBP eCLIP20.3■□□□□ 0.84
TRAM1-201ENST00000262213 FKBP4Q02790 459 aaKnown RBP eCLIP20.3■□□□□ 0.84
TRAM1-201ENST00000262213 GABPB1Q06547 395 aaPredicted RBP20.3■□□□□ 0.84
TRAM1-201ENST00000262213 ADALQ6DHV7 355 aa20.3■□□□□ 0.84
TRAM1-201ENST00000262213 HOMER1Q86YM7 354 aa20.3■□□□□ 0.84
TRAM1-201ENST00000262213 DSCC1Q9BVC3 393 aa20.3■□□□□ 0.84
TRAM1-201ENST00000262213 SALL1Q9NSC2 1324 aa20.3■□□□□ 0.84
TRAM1-201ENST00000262213 LINC00301Q8NCQ3 95 aa20.3■□□□□ 0.84
TRAM1-201ENST00000262213 HELLSQ9NRZ9 838 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms