RNA–Protein interactions for RNA: ENST00000255320.6

HMGB1P5-201, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 642 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-201ENST00000255320 ITPKAP23677 461 aa6.93□□□□□ -1.3
HMGB1P5-201ENST00000255320 SIK1P57059 783 aa6.93□□□□□ -1.3
HMGB1P5-201ENST00000255320 RACK1P63244 317 aaKnown RBP6.93□□□□□ -1.3
HMGB1P5-201ENST00000255320 GPR161Q8N6U8 529 aaKnown RBP6.93□□□□□ -1.3
HMGB1P5-201ENST00000255320 NXPE3Q969Y0 559 aa6.93□□□□□ -1.3
HMGB1P5-201ENST00000255320 ACBD3Q9H3P7 528 aa6.93□□□□□ -1.3
HMGB1P5-201ENST00000255320 CCSER2Q9H7U1 834 aa6.93□□□□□ -1.3
HMGB1P5-201ENST00000255320 SRA1Q9HD15 236 aaKnown RBP6.93□□□□□ -1.3
HMGB1P5-201ENST00000255320 NXF1Q9UBU9 619 aaKnown RBP6.93□□□□□ -1.3
HMGB1P5-201ENST00000255320 SLC6A14Q9UN76 642 aa6.93□□□□□ -1.3
HMGB1P5-201ENST00000255320 H3BM21 787 aa6.92□□□□□ -1.3
HMGB1P5-201ENST00000255320 FBXO24O75426 580 aa6.92□□□□□ -1.3
HMGB1P5-201ENST00000255320 VSIG8P0DPA2 414 aa6.92□□□□□ -1.3
HMGB1P5-201ENST00000255320 ARAFP10398 606 aa6.92□□□□□ -1.3
HMGB1P5-201ENST00000255320 ADAMTSL4Q6UY14 1074 aa6.92□□□□□ -1.3
HMGB1P5-201ENST00000255320 DTHD1Q6ZMT9 781 aa6.92□□□□□ -1.3
HMGB1P5-201ENST00000255320 USP48Q86UV5 1035 aa6.92□□□□□ -1.3
HMGB1P5-201ENST00000255320 FCHSD1Q86WN1 690 aa6.92□□□□□ -1.3
HMGB1P5-201ENST00000255320 SREK1Q8WXA9 508 aaKnown RBP6.92□□□□□ -1.3
HMGB1P5-201ENST00000255320 TRIM56Q9BRZ2 755 aaKnown RBP6.92□□□□□ -1.3
HMGB1P5-201ENST00000255320 NOC4LQ9BVI4 516 aaKnown RBP6.92□□□□□ -1.3
HMGB1P5-201ENST00000255320 PBX4Q9BYU1 374 aa6.92□□□□□ -1.3
HMGB1P5-201ENST00000255320 IGFLR1Q9H665 355 aa6.92□□□□□ -1.3
HMGB1P5-201ENST00000255320 GGT7Q9UJ14 662 aa6.92□□□□□ -1.3
HMGB1P5-201ENST00000255320 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P5-201ENST00000255320 ADARB2-AS1A8MUL3 147 aa6.91□□□□□ -1.3
HMGB1P5-201ENST00000255320 PDE2AO00408 941 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P5-201ENST00000255320 EIF2AK2P19525 551 aaKnown RBP6.91□□□□□ -1.3
HMGB1P5-201ENST00000255320 ADH6P28332 368 aa6.91□□□□□ -1.3
HMGB1P5-201ENST00000255320 TNNI2P48788 182 aa6.91□□□□□ -1.3
HMGB1P5-201ENST00000255320 TBC1D8BQ0IIM8 1120 aa6.91□□□□□ -1.3
HMGB1P5-201ENST00000255320 PCSK7Q16549 785 aa6.91□□□□□ -1.3
HMGB1P5-201ENST00000255320 SPRED3Q2MJR0 410 aa6.91□□□□□ -1.3
HMGB1P5-201ENST00000255320 NPAS3Q8IXF0 933 aa6.91□□□□□ -1.3
HMGB1P5-201ENST00000255320 SPACA7Q96KW9 195 aa6.91□□□□□ -1.3
HMGB1P5-201ENST00000255320 ZNF576Q9H609 170 aa6.91□□□□□ -1.3
HMGB1P5-201ENST00000255320 COPRSQ9NQ92 184 aa6.91□□□□□ -1.3
HMGB1P5-201ENST00000255320 MBIPQ9NS73 344 aa6.91□□□□□ -1.3
HMGB1P5-201ENST00000255320 PPP4R2Q9NY27 417 aa6.91□□□□□ -1.3
HMGB1P5-201ENST00000255320 A0A096LPE4 126 aa6.9□□□□□ -1.3
HMGB1P5-201ENST00000255320 A0A1W2PPZ6 126 aa6.9□□□□□ -1.3
HMGB1P5-201ENST00000255320 GHRHP01286 108 aa6.9□□□□□ -1.3
HMGB1P5-201ENST00000255320 CPB1P15086 417 aa6.9□□□□□ -1.3
HMGB1P5-201ENST00000255320 ADH7P40394 386 aa6.9□□□□□ -1.3
HMGB1P5-201ENST00000255320 FAM35AQ86V20 835 aa6.9□□□□□ -1.3
HMGB1P5-201ENST00000255320 POP1Q99575 1024 aaKnown RBP6.9□□□□□ -1.3
HMGB1P5-201ENST00000255320 USP35Q9P2H5 1018 aa6.9□□□□□ -1.3
HMGB1P5-201ENST00000255320 AKAP2Q9Y2D5 859 aa6.9□□□□□ -1.3
HMGB1P5-201ENST00000255320 CELA3AP09093 270 aa6.89□□□□□ -1.31
HMGB1P5-201ENST00000255320 FAAP100Q0VG06 881 aa6.89□□□□□ -1.31
HMGB1P5-201ENST00000255320 CCDC85BQ15834 202 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P5-201ENST00000255320 RNFT1Q5M7Z0 435 aa6.89□□□□□ -1.31
HMGB1P5-201ENST00000255320 PERM1Q5SV97 790 aa6.89□□□□□ -1.31
HMGB1P5-201ENST00000255320 TPTE2Q6XPS3 522 aa6.89□□□□□ -1.31
HMGB1P5-201ENST00000255320 ZNF654Q8IZM8 581 aa6.89□□□□□ -1.31
HMGB1P5-201ENST00000255320 ASAP3Q8TDY4 903 aa6.89□□□□□ -1.31
HMGB1P5-201ENST00000255320 PLD4Q96BZ4 506 aa6.89□□□□□ -1.31
HMGB1P5-201ENST00000255320 LPIN3Q9BQK8 851 aa6.89□□□□□ -1.31
HMGB1P5-201ENST00000255320 MUC3BQ9H195 1237 aa6.89□□□□□ -1.31
HMGB1P5-201ENST00000255320 KBTBD4Q9NVX7 518 aa6.89□□□□□ -1.31
HMGB1P5-201ENST00000255320 ENC1O14682 589 aa6.88□□□□□ -1.31
HMGB1P5-201ENST00000255320 MAP2K3P46734 347 aa6.88□□□□□ -1.31
HMGB1P5-201ENST00000255320 SV2BQ7L1I2 683 aa6.88□□□□□ -1.31
HMGB1P5-201ENST00000255320 CAPN10Q9HC96 672 aa6.88□□□□□ -1.31
HMGB1P5-201ENST00000255320 GGA1Q9UJY5 639 aa6.88□□□□□ -1.31
HMGB1P5-201ENST00000255320 IGF1RP08069 1367 aa6.87□□□□□ -1.31
HMGB1P5-201ENST00000255320 ERBB4Q15303 1308 aa6.87□□□□□ -1.31
HMGB1P5-201ENST00000255320 NEURL1BA8MQ27 555 aa6.87□□□□□ -1.31
HMGB1P5-201ENST00000255320 F6X3S4 739 aa6.87□□□□□ -1.31
HMGB1P5-201ENST00000255320 SMNDC1O75940 238 aaKnown RBP eCLIP6.87□□□□□ -1.31
HMGB1P5-201ENST00000255320 RPS26P11Q5JNZ5 115 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P5-201ENST00000255320 CEP135Q66GS9 1140 aa6.87□□□□□ -1.31
HMGB1P5-201ENST00000255320 SLCO4C1Q6ZQN7 724 aa6.87□□□□□ -1.31
HMGB1P5-201ENST00000255320 SLC43A3Q8NBI5 491 aa6.87□□□□□ -1.31
HMGB1P5-201ENST00000255320 RSRP1Q9BUV0 290 aa6.87□□□□□ -1.31
HMGB1P5-201ENST00000255320 SMG9Q9H0W8 520 aaKnown RBP6.87□□□□□ -1.31
HMGB1P5-201ENST00000255320 RBSNQ9H1K0 784 aa6.87□□□□□ -1.31
HMGB1P5-201ENST00000255320 FRRS1LQ9P0K9 344 aa6.87□□□□□ -1.31
HMGB1P5-201ENST00000255320 SOX13Q9UN79 622 aa6.87□□□□□ -1.31
HMGB1P5-201ENST00000255320 TRIM33Q9UPN9 1127 aa6.87□□□□□ -1.31
HMGB1P5-201ENST00000255320 ELOA3CA0A087WX78 387 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P5-201ENST00000255320 ELOA3DA6NLF2 546 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P5-201ENST00000255320 PAGE1O75459 146 aa6.86□□□□□ -1.31
HMGB1P5-201ENST00000255320 GJA8P48165 433 aa6.86□□□□□ -1.31
HMGB1P5-201ENST00000255320 KRT76Q01546 638 aa6.86□□□□□ -1.31
HMGB1P5-201ENST00000255320 SF3A1Q15459 793 aaKnown RBP6.86□□□□□ -1.31
HMGB1P5-201ENST00000255320 ELOA3BQ3SY89 546 aa6.86□□□□□ -1.31
HMGB1P5-201ENST00000255320 VN1R5Q7Z5H4 357 aa6.86□□□□□ -1.31
HMGB1P5-201ENST00000255320 ELOA3Q8NG57 546 aa6.86□□□□□ -1.31
HMGB1P5-201ENST00000255320 BSNDQ8WZ55 320 aa6.86□□□□□ -1.31
HMGB1P5-201ENST00000255320 RHOVQ96L33 236 aa6.86□□□□□ -1.31
HMGB1P5-201ENST00000255320 DRC1Q96MC2 740 aa6.86□□□□□ -1.31
HMGB1P5-201ENST00000255320 NECAB3Q96P71 396 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P5-201ENST00000255320 COL25A1Q9BXS0 654 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P5-201ENST00000255320 CEP44Q9C0F1 390 aa6.86□□□□□ -1.31
HMGB1P5-201ENST00000255320 ZFYVE1Q9HBF4 777 aa6.86□□□□□ -1.31
HMGB1P5-201ENST00000255320 SEC31BQ9NQW1 1179 aa6.86□□□□□ -1.31
HMGB1P5-201ENST00000255320 NSFL1CQ9UNZ2 370 aaKnown RBP6.86□□□□□ -1.31
HMGB1P5-201ENST00000255320 LIG3P49916 1009 aa6.85□□□□□ -1.31
HMGB1P5-201ENST00000255320 MAP3K11Q16584 847 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms