RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 SMARCC2Q8TAQ2 1214 aa11.6□□□□□ -0.55
SLF2-201ENST00000238961 F8W031 263 aaPredicted RBP11.6□□□□□ -0.55
SLF2-201ENST00000238961 ZEB2O60315 1214 aa11.6□□□□□ -0.55
SLF2-201ENST00000238961 RPS6KA2Q15349 733 aa11.6□□□□□ -0.55
SLF2-201ENST00000238961 NAP1L4Q99733 375 aaKnown RBP11.6□□□□□ -0.55
SLF2-201ENST00000238961 TRIM35Q9UPQ4 493 aa11.6□□□□□ -0.55
SLF2-201ENST00000238961 CCDC7Q96M83 1385 aa11.6□□□□□ -0.55
SLF2-201ENST00000238961 C10orf67Q8IYJ2 551 aa11.6□□□□□ -0.55
SLF2-201ENST00000238961 MORC4Q8TE76 937 aa11.6□□□□□ -0.55
SLF2-201ENST00000238961 C6orf50Q9HD87 102 aa11.6□□□□□ -0.55
SLF2-201ENST00000238961 TRMT112Q9UI30 125 aaKnown RBP11.6□□□□□ -0.55
SLF2-201ENST00000238961 ZBTB9Q96C00 473 aa11.59□□□□□ -0.55
SLF2-201ENST00000238961 HAUS8Q9BT25 410 aa11.59□□□□□ -0.55
SLF2-201ENST00000238961 BOLA2Q9H3K6 86 aa11.59□□□□□ -0.55
SLF2-201ENST00000238961 VEZTQ9HBM0 779 aa11.59□□□□□ -0.55
SLF2-201ENST00000238961 BACH1O14867 736 aa11.59□□□□□ -0.55
SLF2-201ENST00000238961 MCM7P33993 719 aa11.59□□□□□ -0.55
SLF2-201ENST00000238961 FYB2Q5VWT5 728 aa11.59□□□□□ -0.55
SLF2-201ENST00000238961 FANCIQ9NVI1 1328 aa11.59□□□□□ -0.55
SLF2-201ENST00000238961 HMGXB3Q12766 1538 aa11.59□□□□□ -0.55
SLF2-201ENST00000238961 ZNF569Q5MCW4 686 aa11.59□□□□□ -0.55
SLF2-201ENST00000238961 SULT6B1Q6IMI4 303 aa11.59□□□□□ -0.55
SLF2-201ENST00000238961 STAT6P42226 847 aa11.59□□□□□ -0.55
SLF2-201ENST00000238961 EXOSC9Q06265 439 aaKnown RBP11.59□□□□□ -0.55
SLF2-201ENST00000238961 MTRF1LQ9UGC7 380 aaKnown RBP11.59□□□□□ -0.55
SLF2-201ENST00000238961 STX10O60499 249 aa11.59□□□□□ -0.55
SLF2-201ENST00000238961 ST5P78524 1137 aa11.59□□□□□ -0.55
SLF2-201ENST00000238961 DNAJC21Q5F1R6 531 aaKnown RBP11.59□□□□□ -0.55
SLF2-201ENST00000238961 TMEM67Q5HYA8 995 aa11.59□□□□□ -0.55
SLF2-201ENST00000238961 PRPF40BQ6NWY9 871 aaKnown RBP11.59□□□□□ -0.55
SLF2-201ENST00000238961 ZNF131P52739 623 aa11.58□□□□□ -0.55
SLF2-201ENST00000238961 ANKRD35Q8N283 1001 aa11.58□□□□□ -0.55
SLF2-201ENST00000238961 RNF217Q8TC41 542 aa11.58□□□□□ -0.55
SLF2-201ENST00000238961 ARHGEF2Q92974 986 aaKnown RBP11.58□□□□□ -0.55
SLF2-201ENST00000238961 MRPL46Q9H2W6 279 aaKnown RBP11.58□□□□□ -0.55
SLF2-201ENST00000238961 CTAGE5O15320 804 aa11.58□□□□□ -0.56
SLF2-201ENST00000238961 TRPC3Q13507 836 aa11.58□□□□□ -0.56
SLF2-201ENST00000238961 RILPL1Q5EBL4 403 aa11.58□□□□□ -0.56
SLF2-201ENST00000238961 RRAGBQ5VZM2 374 aa11.58□□□□□ -0.56
SLF2-201ENST00000238961 ANO3Q9BYT9 981 aa11.58□□□□□ -0.56
SLF2-201ENST00000238961 RMND1Q9NWS8 449 aa11.58□□□□□ -0.56
SLF2-201ENST00000238961 NKIRAS1Q9NYS0 192 aa11.58□□□□□ -0.56
SLF2-201ENST00000238961 STX8Q9UNK0 236 aa11.58□□□□□ -0.56
SLF2-201ENST00000238961 PDCD2Q16342 344 aaPredicted RBP11.58□□□□□ -0.56
SLF2-201ENST00000238961 SKA2Q8WVK7 121 aaPredicted RBP11.58□□□□□ -0.56
SLF2-201ENST00000238961 ZNF408Q9H9D4 720 aa11.58□□□□□ -0.56
SLF2-201ENST00000238961 VCX3AQ9NNX9 186 aa11.58□□□□□ -0.56
SLF2-201ENST00000238961 GINS2Q9Y248 185 aa11.58□□□□□ -0.56
SLF2-201ENST00000238961 LMOD1P29536 600 aaPredicted RBP11.58□□□□□ -0.56
SLF2-201ENST00000238961 GSDMDP57764 484 aa11.58□□□□□ -0.56
SLF2-201ENST00000238961 SLC9A5Q14940 896 aa11.58□□□□□ -0.56
SLF2-201ENST00000238961 IFT81Q8WYA0 676 aa11.58□□□□□ -0.56
SLF2-201ENST00000238961 ZC4H2Q9NQZ6 224 aa11.58□□□□□ -0.56
SLF2-201ENST00000238961 TSPY3P0CV98 308 aa11.58□□□□□ -0.56
SLF2-201ENST00000238961 TSPY8P0CW00 308 aa11.58□□□□□ -0.56
SLF2-201ENST00000238961 IL1RL1Q01638 556 aa11.58□□□□□ -0.56
SLF2-201ENST00000238961 MCM6Q14566 821 aa11.58□□□□□ -0.56
SLF2-201ENST00000238961 ZBTB41Q5SVQ8 909 aa11.58□□□□□ -0.56
SLF2-201ENST00000238961 CCDC183Q5T5S1 534 aa11.58□□□□□ -0.56
SLF2-201ENST00000238961 KANK3Q6NY19 840 aa11.58□□□□□ -0.56
SLF2-201ENST00000238961 FAM200AQ8TCP9 573 aa11.58□□□□□ -0.56
SLF2-201ENST00000238961 LAMC3Q9Y6N6 1575 aa11.58□□□□□ -0.56
SLF2-201ENST00000238961 GOLGA6BA6NDN3 693 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 TRAF1Q13077 416 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 TXNDC2Q86VQ3 553 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 RIOK1Q9BRS2 568 aaKnown RBP11.57□□□□□ -0.56
SLF2-201ENST00000238961 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.57□□□□□ -0.56
SLF2-201ENST00000238961 KRT3P12035 628 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 RAP1GDS1P52306 607 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 NUCB1Q02818 461 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 CASC4Q6P4E1 433 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 MPRIPQ6WCQ1 1025 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 UBLCP1Q8WVY7 318 aaPredicted RBP11.57□□□□□ -0.56
SLF2-201ENST00000238961 BAG5Q9UL15 447 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 OATP04181 439 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 BRDTQ58F21 947 aaPredicted RBP11.57□□□□□ -0.56
SLF2-201ENST00000238961 EVI5LQ96CN4 794 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 SYNJ2O15056 1496 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 ZSCAN16Q9H4T2 348 aaPredicted RBP11.57□□□□□ -0.56
SLF2-201ENST00000238961 RRP9O43818 475 aaKnown RBP11.57□□□□□ -0.56
SLF2-201ENST00000238961 IVLP07476 585 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 MX2P20592 715 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 RFC4P35249 363 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 AFMP43652 599 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 SLC12A2P55011 1212 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 CCDC122Q5T0U0 273 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 HEATR3Q7Z4Q2 680 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 GPR161Q8N6U8 529 aaKnown RBP11.57□□□□□ -0.56
SLF2-201ENST00000238961 LEO1Q8WVC0 666 aaPredicted RBP11.57□□□□□ -0.56
SLF2-201ENST00000238961 NGLY1Q96IV0 654 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 MYD88Q99836 296 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.57□□□□□ -0.56
SLF2-201ENST00000238961 STK25O00506 426 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 PICALMQ13492 652 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 UTP14CQ5TAP6 766 aaKnown RBP11.57□□□□□ -0.56
SLF2-201ENST00000238961 MIER3Q7Z3K6 550 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 LMNTD2Q8IXW0 634 aa11.57□□□□□ -0.56
SLF2-201ENST00000238961 SCAND2PQ9GZW5 306 aaPredicted RBP11.57□□□□□ -0.56
SLF2-201ENST00000238961 CHMP2AO43633 222 aa11.56□□□□□ -0.56
SLF2-201ENST00000238961 GBP1P32455 592 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms