RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 ARL1P40616 181 aaPredicted RBP15.5■□□□□ 0.07
TGFBR3-201ENST00000212355 NCOA5Q9HCD5 579 aaKnown RBP15.5■□□□□ 0.07
TGFBR3-201ENST00000212355 IFT140Q96RY7 1462 aa15.5■□□□□ 0.07
TGFBR3-201ENST00000212355 HDAC1Q13547 482 aaPredicted RBP15.5■□□□□ 0.07
TGFBR3-201ENST00000212355 OTUD7BQ6GQQ9 843 aa15.5■□□□□ 0.07
TGFBR3-201ENST00000212355 UTP14AQ9BVJ6 771 aaKnown RBP15.5■□□□□ 0.07
TGFBR3-201ENST00000212355 EEF2P13639 858 aaKnown RBP15.5■□□□□ 0.07
TGFBR3-201ENST00000212355 MCM3P25205 808 aa15.5■□□□□ 0.07
TGFBR3-201ENST00000212355 BMS1Q14692 1282 aaKnown RBP15.5■□□□□ 0.07
TGFBR3-201ENST00000212355 CEP85Q6P2H3 762 aa15.5■□□□□ 0.07
TGFBR3-201ENST00000212355 NIP7Q9Y221 180 aaKnown RBP eCLIP15.5■□□□□ 0.07
TGFBR3-201ENST00000212355 DYNC1I1O14576 645 aa15.5■□□□□ 0.07
TGFBR3-201ENST00000212355 MNAT1P51948 309 aa15.5■□□□□ 0.07
TGFBR3-201ENST00000212355 ZNF174Q15697 407 aa15.5■□□□□ 0.07
TGFBR3-201ENST00000212355 CCDC50Q8IVM0 306 aa15.5■□□□□ 0.07
TGFBR3-201ENST00000212355 NAA15Q9BXJ9 866 aaKnown RBP15.5■□□□□ 0.07
TGFBR3-201ENST00000212355 KIAA0753Q2KHM9 967 aa15.49■□□□□ 0.07
TGFBR3-201ENST00000212355 PPIP5K1Q6PFW1 1433 aa15.49■□□□□ 0.07
TGFBR3-201ENST00000212355 GSTA5Q7RTV2 222 aa15.49■□□□□ 0.07
TGFBR3-201ENST00000212355 PPP1R14CQ8TAE6 165 aa15.49■□□□□ 0.07
TGFBR3-201ENST00000212355 CTNND2Q9UQB3 1225 aa15.49■□□□□ 0.07
TGFBR3-201ENST00000212355 PTPDC1A2A3K4 754 aa15.49■□□□□ 0.07
TGFBR3-201ENST00000212355 BAG3O95817 575 aa15.49■□□□□ 0.07
TGFBR3-201ENST00000212355 CEP112Q8N8E3 955 aa15.49■□□□□ 0.07
TGFBR3-201ENST00000212355 SPAG5Q96R06 1193 aa15.49■□□□□ 0.07
TGFBR3-201ENST00000212355 ZSCAN16Q9H4T2 348 aaPredicted RBP15.49■□□□□ 0.07
TGFBR3-201ENST00000212355 MAGEB6P1A0A0J9YX57 407 aa15.49■□□□□ 0.07
TGFBR3-201ENST00000212355 PAXBP1Q9Y5B6 917 aa15.49■□□□□ 0.07
TGFBR3-201ENST00000212355 CTAGE15A4D2H0 777 aa15.49■□□□□ 0.07
TGFBR3-201ENST00000212355 CTAGE8P0CG41 777 aa15.49■□□□□ 0.07
TGFBR3-201ENST00000212355 NAA16Q6N069 864 aaPredicted RBP15.49■□□□□ 0.07
TGFBR3-201ENST00000212355 CTAGE6Q86UF2 777 aa15.49■□□□□ 0.07
TGFBR3-201ENST00000212355 CTAGE4Q8IX94 777 aa15.49■□□□□ 0.07
TGFBR3-201ENST00000212355 ZNF594Q96JF6 807 aaPredicted RBP15.49■□□□□ 0.07
TGFBR3-201ENST00000212355 VEZTQ9HBM0 779 aa15.49■□□□□ 0.07
TGFBR3-201ENST00000212355 CABP5Q9NP86 173 aa15.49■□□□□ 0.07
TGFBR3-201ENST00000212355 HMG20BQ9P0W2 317 aa15.49■□□□□ 0.07
TGFBR3-201ENST00000212355 THOC2Q8NI27 1593 aaKnown RBP15.48■□□□□ 0.07
TGFBR3-201ENST00000212355 FSD2A1L4K1 749 aa15.48■□□□□ 0.07
TGFBR3-201ENST00000212355 TNNI2P48788 182 aa15.48■□□□□ 0.07
TGFBR3-201ENST00000212355 MXRA7P84157 204 aa15.48■□□□□ 0.07
TGFBR3-201ENST00000212355 ATP8B2P98198 1209 aa15.48■□□□□ 0.07
TGFBR3-201ENST00000212355 FAM114A1Q8IWE2 563 aa15.48■□□□□ 0.07
TGFBR3-201ENST00000212355 ANKRD44Q8N8A2 993 aa15.48■□□□□ 0.07
TGFBR3-201ENST00000212355 RBSNQ9H1K0 784 aa15.48■□□□□ 0.07
TGFBR3-201ENST00000212355 SPTLC2O15270 562 aa15.48■□□□□ 0.07
TGFBR3-201ENST00000212355 CCDC152Q4G0S7 254 aa15.48■□□□□ 0.07
TGFBR3-201ENST00000212355 hCG_1642624A0A1W2PR95 340 aa15.48■□□□□ 0.07
TGFBR3-201ENST00000212355 NEMFO60524 1076 aa15.48■□□□□ 0.07
TGFBR3-201ENST00000212355 U2AF2P26368 475 aaKnown RBP eCLIP15.48■□□□□ 0.077e-7■■■□□ 17
TGFBR3-201ENST00000212355 PLEKHM2Q8IWE5 1019 aa15.48■□□□□ 0.07
TGFBR3-201ENST00000212355 MICALL1Q8N3F8 863 aa15.48■□□□□ 0.07
TGFBR3-201ENST00000212355 FAM200AQ8TCP9 573 aa15.48■□□□□ 0.07
TGFBR3-201ENST00000212355 DCAF17Q5H9S7 520 aaPredicted RBP15.47■□□□□ 0.07
TGFBR3-201ENST00000212355 MYL10Q9BUA6 226 aa15.47■□□□□ 0.07
TGFBR3-201ENST00000212355 TLDC2A0PJX2 215 aa15.47■□□□□ 0.07
TGFBR3-201ENST00000212355 CCDC174Q6PII3 467 aa15.47■□□□□ 0.07
TGFBR3-201ENST00000212355 KRT222Q8N1A0 295 aa15.47■□□□□ 0.07
TGFBR3-201ENST00000212355 VWA3AA6NCI4 1184 aa15.47■□□□□ 0.07
TGFBR3-201ENST00000212355 MICALCLQ6ZW33 695 aa15.47■□□□□ 0.07
TGFBR3-201ENST00000212355 MAEAQ7L5Y9 396 aa15.47■□□□□ 0.07
TGFBR3-201ENST00000212355 TAOK3Q9H2K8 898 aa15.47■□□□□ 0.07
TGFBR3-201ENST00000212355 HLA-DOAP06340 250 aa15.47■□□□□ 0.07
TGFBR3-201ENST00000212355 UVSSAQ2YD98 709 aa15.47■□□□□ 0.07
TGFBR3-201ENST00000212355 MCM9Q9NXL9 1143 aa15.47■□□□□ 0.07
TGFBR3-201ENST00000212355 CETN1Q12798 172 aa15.47■□□□□ 0.07
TGFBR3-201ENST00000212355 CCDC63Q8NA47 563 aa15.47■□□□□ 0.07
TGFBR3-201ENST00000212355 C14orf93Q9H972 538 aaKnown RBP15.47■□□□□ 0.07
TGFBR3-201ENST00000212355 CCDC171Q6TFL3 1326 aa15.46■□□□□ 0.07
TGFBR3-201ENST00000212355 CTAGE9A4FU28 777 aa15.46■□□□□ 0.07
TGFBR3-201ENST00000212355 RAPGEF1Q13905 1077 aa15.46■□□□□ 0.07
TGFBR3-201ENST00000212355 OTUD6BQ8N6M0 293 aa15.46■□□□□ 0.07
TGFBR3-201ENST00000212355 TBC1D5Q92609 795 aa15.46■□□□□ 0.07
TGFBR3-201ENST00000212355 KSR1Q8IVT5 923 aa15.46■□□□□ 0.07
TGFBR3-201ENST00000212355 SIRT1Q96EB6 747 aa15.46■□□□□ 0.07
TGFBR3-201ENST00000212355 GADD45BO75293 160 aaPredicted RBP15.46■□□□□ 0.07
TGFBR3-201ENST00000212355 TIMM10P62072 90 aa15.46■□□□□ 0.07
TGFBR3-201ENST00000212355 RUFY3Q7L099 469 aa15.46■□□□□ 0.07
TGFBR3-201ENST00000212355 ZCRB1Q8TBF4 217 aaKnown RBP15.46■□□□□ 0.07
TGFBR3-201ENST00000212355 ARFGAP3Q9NP61 516 aa15.46■□□□□ 0.07
TGFBR3-201ENST00000212355 WDR70Q9NW82 654 aa15.46■□□□□ 0.07
TGFBR3-201ENST00000212355 KCNG4Q8TDN1 519 aa15.46■□□□□ 0.06
TGFBR3-201ENST00000212355 PSMB7Q99436 277 aa15.46■□□□□ 0.06
TGFBR3-201ENST00000212355 KRT23Q9C075 422 aa15.46■□□□□ 0.06
TGFBR3-201ENST00000212355 TTC21BQ7Z4L5 1316 aa15.45■□□□□ 0.06
TGFBR3-201ENST00000212355 CHMP2AO43633 222 aa15.45■□□□□ 0.06
TGFBR3-201ENST00000212355 RAB3GAP1Q15042 981 aa15.45■□□□□ 0.06
TGFBR3-201ENST00000212355 EHMT1Q9H9B1 1298 aa15.45■□□□□ 0.06
TGFBR3-201ENST00000212355 HARSP12081 509 aaKnown RBP15.45■□□□□ 0.06
TGFBR3-201ENST00000212355 CAPN2P17655 700 aa15.45■□□□□ 0.06
TGFBR3-201ENST00000212355 RRAGDQ9NQL2 400 aaPredicted RBP15.45■□□□□ 0.06
TGFBR3-201ENST00000212355 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.45■□□□□ 0.06
TGFBR3-201ENST00000212355 RPRD2Q5VT52 1461 aaKnown RBP15.45■□□□□ 0.06
TGFBR3-201ENST00000212355 KANK3Q6NY19 840 aa15.45■□□□□ 0.06
TGFBR3-201ENST00000212355 ESR2Q92731 530 aa15.45■□□□□ 0.06
TGFBR3-201ENST00000212355 B4E1Z4 1266 aa15.45■□□□□ 0.06
TGFBR3-201ENST00000212355 IRX5P78411 483 aaPredicted RBP15.45■□□□□ 0.06
TGFBR3-201ENST00000212355 SETDB2Q96T68 719 aa15.45■□□□□ 0.06
TGFBR3-201ENST00000212355 VPS16Q9H269 839 aa15.45■□□□□ 0.06
TGFBR3-201ENST00000212355 KRT2P35908 639 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms