RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 ALDH1B1P30837 517 aa26.67■■□□□ 1.86
HOXC8-201ENST00000040584 SCARF1Q14162 830 aa26.67■■□□□ 1.86
HOXC8-201ENST00000040584 ARAP2Q8WZ64 1704 aa26.67■■□□□ 1.86
HOXC8-201ENST00000040584 PPEF1O14829 653 aaPredicted RBP26.66■■□□□ 1.86
HOXC8-201ENST00000040584 FRAT2O75474 233 aaPredicted RBP26.66■■□□□ 1.86
HOXC8-201ENST00000040584 CASC1Q6TDU7 716 aa26.66■■□□□ 1.86
HOXC8-201ENST00000040584 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.66■■□□□ 1.86
HOXC8-201ENST00000040584 TBC1D2Q9BYX2 928 aa26.66■■□□□ 1.86
HOXC8-201ENST00000040584 C10orf71Q711Q0 1435 aa26.66■■□□□ 1.86
HOXC8-201ENST00000040584 AK9Q5TCS8 1911 aa26.66■■□□□ 1.86
HOXC8-201ENST00000040584 BCAMP50895 628 aa26.66■■□□□ 1.86
HOXC8-201ENST00000040584 SNRKQ9NRH2 765 aa26.66■■□□□ 1.86
HOXC8-201ENST00000040584 ZNF804BA4D1E1 1349 aa26.65■■□□□ 1.86
HOXC8-201ENST00000040584 CHMLP26374 656 aa26.65■■□□□ 1.86
HOXC8-201ENST00000040584 GPSM2P81274 684 aa26.65■■□□□ 1.86
HOXC8-201ENST00000040584 ANTXR1Q9H6X2 564 aa26.65■■□□□ 1.86
HOXC8-201ENST00000040584 XDHP47989 1333 aa26.64■■□□□ 1.86
HOXC8-201ENST00000040584 POLD1P28340 1107 aa26.64■■□□□ 1.86
HOXC8-201ENST00000040584 STYK1Q6J9G0 422 aa26.64■■□□□ 1.86
HOXC8-201ENST00000040584 GOLIM4O00461 696 aa26.64■■□□□ 1.85
HOXC8-201ENST00000040584 KLRK1P26718 216 aa26.64■■□□□ 1.85
HOXC8-201ENST00000040584 MFAP1P55081 439 aaKnown RBP26.64■■□□□ 1.85
HOXC8-201ENST00000040584 FKBP4Q02790 459 aaKnown RBP eCLIP26.64■■□□□ 1.85
HOXC8-201ENST00000040584 TMC4Q7Z404 712 aa26.64■■□□□ 1.85
HOXC8-201ENST00000040584 ZNF512BQ96KM6 892 aaPredicted RBP26.64■■□□□ 1.85
HOXC8-201ENST00000040584 NSFL1CQ9UNZ2 370 aaKnown RBP26.64■■□□□ 1.85
HOXC8-201ENST00000040584 MCAMP43121 646 aa26.63■■□□□ 1.85
HOXC8-201ENST00000040584 GYG1P46976 350 aa26.63■■□□□ 1.85
HOXC8-201ENST00000040584 PI16Q6UXB8 463 aa26.63■■□□□ 1.85
HOXC8-201ENST00000040584 SP8Q8IXZ3 490 aa26.63■■□□□ 1.85
HOXC8-201ENST00000040584 PAG1Q9NWQ8 432 aa26.63■■□□□ 1.85
HOXC8-201ENST00000040584 ATP6V0A2Q9Y487 856 aa26.63■■□□□ 1.85
HOXC8-201ENST00000040584 UQCRFS1P1P0C7P4 283 aa26.62■■□□□ 1.85
HOXC8-201ENST00000040584 ARID4AP29374 1257 aaPredicted RBP26.62■■□□□ 1.85
HOXC8-201ENST00000040584 FSD1Q9BTV5 496 aa26.62■■□□□ 1.85
HOXC8-201ENST00000040584 LEMD3Q9Y2U8 911 aa26.62■■□□□ 1.85
HOXC8-201ENST00000040584 ZAP70P43403 619 aa26.61■■□□□ 1.85
HOXC8-201ENST00000040584 RBM25P49756 843 aaKnown RBP26.61■■□□□ 1.85
HOXC8-201ENST00000040584 OLFM4Q6UX06 510 aa26.61■■□□□ 1.85
HOXC8-201ENST00000040584 FAM84BQ96KN1 310 aaPredicted RBP26.61■■□□□ 1.85
HOXC8-201ENST00000040584 CAVIN4Q5BKX8 364 aa26.59■■□□□ 1.85
HOXC8-201ENST00000040584 PRPF40BQ6NWY9 871 aaKnown RBP26.59■■□□□ 1.85
HOXC8-201ENST00000040584 TXNRD3Q86VQ6 643 aa26.59■■□□□ 1.85
HOXC8-201ENST00000040584 CNKSR1Q969H4 720 aa26.59■■□□□ 1.85
HOXC8-201ENST00000040584 GPR101Q96P66 508 aaPredicted RBP26.59■■□□□ 1.85
HOXC8-201ENST00000040584 CACNA1SQ13698 1873 aa26.58■■□□□ 1.85
HOXC8-201ENST00000040584 AKAP11Q9UKA4 1901 aa26.58■■□□□ 1.85
HOXC8-201ENST00000040584 UFL1O94874 794 aa26.58■■□□□ 1.85
HOXC8-201ENST00000040584 RASGRF1Q13972 1273 aa26.58■■□□□ 1.85
HOXC8-201ENST00000040584 VPS37DQ86XT2 251 aa26.58■■□□□ 1.85
HOXC8-201ENST00000040584 KBTBD3Q8NAB2 608 aa26.58■■□□□ 1.85
HOXC8-201ENST00000040584 ESYT1Q9BSJ8 1104 aa26.58■■□□□ 1.85
HOXC8-201ENST00000040584 DIAPH3Q9NSV4 1193 aa26.58■■□□□ 1.85
HOXC8-201ENST00000040584 PODXL2Q9NZ53 605 aa26.58■■□□□ 1.85
HOXC8-201ENST00000040584 HMG20BQ9P0W2 317 aa26.58■■□□□ 1.85
HOXC8-201ENST00000040584 GGA1Q9UJY5 639 aa26.58■■□□□ 1.85
HOXC8-201ENST00000040584 IRS2Q9Y4H2 1338 aa26.58■■□□□ 1.85
HOXC8-201ENST00000040584 LRRC37AA6NMS7 1700 aa26.58■■□□□ 1.85
HOXC8-201ENST00000040584 A0A0G2JLW4 131 aa26.57■■□□□ 1.84
HOXC8-201ENST00000040584 SGIP1Q9BQI5 828 aa26.57■■□□□ 1.84
HOXC8-201ENST00000040584 IQSEC3Q9UPP2 1182 aaPredicted RBP26.57■■□□□ 1.84
HOXC8-201ENST00000040584 ATP2B4P23634 1241 aa26.57■■□□□ 1.84
HOXC8-201ENST00000040584 CWC27Q6UX04 472 aaKnown RBP26.57■■□□□ 1.84
HOXC8-201ENST00000040584 FBXO33Q7Z6M2 555 aa26.57■■□□□ 1.84
HOXC8-201ENST00000040584 SPATA5Q8NB90 893 aa26.57■■□□□ 1.84
HOXC8-201ENST00000040584 DPEP1P16444 411 aa26.56■■□□□ 1.84
HOXC8-201ENST00000040584 TBC1D16Q8TBP0 767 aa26.56■■□□□ 1.84
HOXC8-201ENST00000040584 SLKQ9H2G2 1235 aaPredicted RBP26.56■■□□□ 1.84
HOXC8-201ENST00000040584 POLLQ9UGP5 575 aa26.56■■□□□ 1.84
HOXC8-201ENST00000040584 SLX4Q8IY92 1834 aa26.56■■□□□ 1.84
HOXC8-201ENST00000040584 CYP2E1P05181 493 aaPredicted RBP26.55■■□□□ 1.84
HOXC8-201ENST00000040584 HIBADHP31937 336 aaKnown RBP26.55■■□□□ 1.84
HOXC8-201ENST00000040584 SNX21Q969T3 373 aa26.55■■□□□ 1.84
HOXC8-201ENST00000040584 IL25Q9H293 177 aa26.55■■□□□ 1.84
HOXC8-201ENST00000040584 GNL3LQ9NVN8 582 aaKnown RBP26.55■■□□□ 1.84
HOXC8-201ENST00000040584 CHGBP05060 677 aa26.55■■□□□ 1.84
HOXC8-201ENST00000040584 HSCBQ8IWL3 235 aa26.55■■□□□ 1.84
HOXC8-201ENST00000040584 TMX4Q9H1E5 349 aaPredicted RBP26.55■■□□□ 1.84
HOXC8-201ENST00000040584 ZNF219Q9P2Y4 722 aaPredicted RBP26.55■■□□□ 1.84
HOXC8-201ENST00000040584 KIF13BQ9NQT8 1826 aa26.54■■□□□ 1.84
HOXC8-201ENST00000040584 PTGER2P43116 358 aa26.54■■□□□ 1.84
HOXC8-201ENST00000040584 MPNDQ8N594 471 aa26.54■■□□□ 1.84
HOXC8-201ENST00000040584 C6orf229H3BNL8 230 aa26.53■■□□□ 1.84
HOXC8-201ENST00000040584 HIP1O00291 1037 aa26.53■■□□□ 1.84
HOXC8-201ENST00000040584 KCNA3P22001 575 aa26.53■■□□□ 1.84
HOXC8-201ENST00000040584 FAM227BQ96M60 508 aa26.53■■□□□ 1.84
HOXC8-201ENST00000040584 CHMP5Q9NZZ3 219 aa26.53■■□□□ 1.84
HOXC8-201ENST00000040584 PPP1R1BQ9UD71 204 aaPredicted RBP26.53■■□□□ 1.84
HOXC8-201ENST00000040584 RFX7Q2KHR2 1363 aa26.53■■□□□ 1.84
HOXC8-201ENST00000040584 REC8O95072 547 aa26.53■■□□□ 1.84
HOXC8-201ENST00000040584 NMIQ13287 307 aaPredicted RBP26.53■■□□□ 1.84
HOXC8-201ENST00000040584 LTBP1Q14766 1721 aa26.52■■□□□ 1.84
HOXC8-201ENST00000040584 TICAM2Q86XR7 235 aa26.52■■□□□ 1.84
HOXC8-201ENST00000040584 PIH1D3Q9NQM4 214 aaKnown RBP26.52■■□□□ 1.84
HOXC8-201ENST00000040584 DPP8Q6V1X1 898 aaPredicted RBP26.51■■□□□ 1.83
HOXC8-201ENST00000040584 C15orf52Q6ZUT6 534 aaKnown RBP26.51■■□□□ 1.83
HOXC8-201ENST00000040584 DLEC1Q9Y238 1755 aa26.51■■□□□ 1.83
HOXC8-201ENST00000040584 SGSM2O43147 1006 aa26.51■■□□□ 1.83
HOXC8-201ENST00000040584 TGFB2P61812 414 aa26.51■■□□□ 1.83
HOXC8-201ENST00000040584 TTF1Q15361 905 aaPredicted RBP26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms