RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 ZNF408Q9H9D4 720 aa20.27■□□□□ 0.84
ERCC1-201ENST00000013807 AKAP11Q9UKA4 1901 aa20.27■□□□□ 0.84
ERCC1-201ENST00000013807 PITPNM2Q9BZ72 1349 aa20.27■□□□□ 0.83
ERCC1-201ENST00000013807 ITGA6P23229 1130 aa20.26■□□□□ 0.83
ERCC1-201ENST00000013807 IGHMBP2P38935 993 aaKnown RBP20.26■□□□□ 0.83
ERCC1-201ENST00000013807 HUNKP57058 714 aa20.26■□□□□ 0.83
ERCC1-201ENST00000013807 DLK2Q6UY11 383 aa20.26■□□□□ 0.83
ERCC1-201ENST00000013807 ANKRD2Q9GZV1 360 aa20.26■□□□□ 0.83
ERCC1-201ENST00000013807 COA1Q9GZY4 146 aa20.26■□□□□ 0.83
ERCC1-201ENST00000013807 GBA2Q9HCG7 927 aaPredicted RBP20.26■□□□□ 0.83
ERCC1-201ENST00000013807 SPINK5Q9NQ38 1064 aaPredicted RBP20.26■□□□□ 0.83
ERCC1-201ENST00000013807 DACT2Q5SW24 774 aa20.25■□□□□ 0.83
ERCC1-201ENST00000013807 STRIP1Q5VSL9 837 aa20.25■□□□□ 0.83
ERCC1-201ENST00000013807 SULF1Q8IWU6 871 aa20.25■□□□□ 0.83
ERCC1-201ENST00000013807 C2orf69Q8N8R5 385 aa20.25■□□□□ 0.83
ERCC1-201ENST00000013807 MYOZ2Q9NPC6 264 aa20.25■□□□□ 0.83
ERCC1-201ENST00000013807 GGA3Q9NZ52 723 aa20.25■□□□□ 0.83
ERCC1-201ENST00000013807 ADM5C9JUS6 153 aa20.24■□□□□ 0.83
ERCC1-201ENST00000013807 GRM1Q13255 1194 aa20.24■□□□□ 0.83
ERCC1-201ENST00000013807 SCARF1Q14162 830 aa20.24■□□□□ 0.83
ERCC1-201ENST00000013807 BEND3Q5T5X7 828 aa20.24■□□□□ 0.83
ERCC1-201ENST00000013807 RGMBQ6NW40 437 aa20.24■□□□□ 0.83
ERCC1-201ENST00000013807 MYO3BQ8WXR4 1341 aa20.24■□□□□ 0.83
ERCC1-201ENST00000013807 FAM155AB1AL88 458 aaPredicted RBP20.23■□□□□ 0.83
ERCC1-201ENST00000013807 FOXO4P98177 505 aa20.23■□□□□ 0.83
ERCC1-201ENST00000013807 FAM161AQ3B820 660 aa20.23■□□□□ 0.83
ERCC1-201ENST00000013807 TXNRD3Q86VQ6 643 aa20.23■□□□□ 0.83
ERCC1-201ENST00000013807 CCDC102AQ96A19 550 aa20.23■□□□□ 0.83
ERCC1-201ENST00000013807 ZNF804BA4D1E1 1349 aa20.23■□□□□ 0.83
ERCC1-201ENST00000013807 ASTN2O75129 1339 aaPredicted RBP20.23■□□□□ 0.83
ERCC1-201ENST00000013807 C15orf52Q6ZUT6 534 aaKnown RBP20.22■□□□□ 0.83
ERCC1-201ENST00000013807 MPHOSPH8Q99549 860 aa20.22■□□□□ 0.83
ERCC1-201ENST00000013807 SALL2Q9Y467 1007 aaPredicted RBP20.22■□□□□ 0.83
ERCC1-201ENST00000013807 ZNF521Q96K83 1311 aa20.22■□□□□ 0.83
ERCC1-201ENST00000013807 FKBP1BP68106 108 aa20.21■□□□□ 0.83
ERCC1-201ENST00000013807 ANGEL2Q5VTE6 544 aaKnown RBP20.21■□□□□ 0.83
ERCC1-201ENST00000013807 CDCA5Q96FF9 252 aa20.21■□□□□ 0.83
ERCC1-201ENST00000013807 IRS2Q9Y4H2 1338 aa20.21■□□□□ 0.83
ERCC1-201ENST00000013807 PAPPA2Q9BXP8 1791 aa20.21■□□□□ 0.83
ERCC1-201ENST00000013807 ANKRD18BA2A2Z9 1011 aa20.2■□□□□ 0.82
ERCC1-201ENST00000013807 ZIC5Q96T25 663 aa20.2■□□□□ 0.82
ERCC1-201ENST00000013807 ECM29Q5VYK3 1845 aa20.2■□□□□ 0.82
ERCC1-201ENST00000013807 F6X3S4 739 aa20.19■□□□□ 0.82
ERCC1-201ENST00000013807 CHRNDQ07001 517 aa20.19■□□□□ 0.82
ERCC1-201ENST00000013807 OGFOD1Q8N543 542 aa20.19■□□□□ 0.82
ERCC1-201ENST00000013807 ALDH1L1O75891 902 aa20.18■□□□□ 0.82
ERCC1-201ENST00000013807 IFIT5Q13325 482 aaKnown RBP20.18■□□□□ 0.82
ERCC1-201ENST00000013807 TTLL5Q6EMB2 1281 aa20.18■□□□□ 0.82
ERCC1-201ENST00000013807 ABHD8Q96I13 439 aa20.18■□□□□ 0.82
ERCC1-201ENST00000013807 SAGE1Q9NXZ1 904 aa20.18■□□□□ 0.82
ERCC1-201ENST00000013807 GRM8O00222 908 aa20.17■□□□□ 0.82
ERCC1-201ENST00000013807 WNT10BO00744 389 aa20.17■□□□□ 0.82
ERCC1-201ENST00000013807 SLC10A3P09131 477 aa20.17■□□□□ 0.82
ERCC1-201ENST00000013807 NBPF9Q3BBW0 867 aa20.17■□□□□ 0.82
ERCC1-201ENST00000013807 REM2Q8IYK8 340 aaPredicted RBP20.17■□□□□ 0.82
ERCC1-201ENST00000013807 KLRK1P26718 216 aa20.16■□□□□ 0.82
ERCC1-201ENST00000013807 ZNF157P51786 506 aaPredicted RBP20.16■□□□□ 0.82
ERCC1-201ENST00000013807 FAM9BQ8IZU0 186 aa20.16■□□□□ 0.82
ERCC1-201ENST00000013807 ZBED3Q96IU2 234 aaPredicted RBP20.16■□□□□ 0.82
ERCC1-201ENST00000013807 MXD3Q9BW11 206 aa20.16■□□□□ 0.82
ERCC1-201ENST00000013807 CD209Q9NNX6 404 aa20.16■□□□□ 0.82
ERCC1-201ENST00000013807 EPHA10Q5JZY3 1008 aa20.15■□□□□ 0.82
ERCC1-201ENST00000013807 LMBR1LQ6UX01 489 aa20.15■□□□□ 0.82
ERCC1-201ENST00000013807 TSKSQ9UJT2 592 aa20.15■□□□□ 0.82
ERCC1-201ENST00000013807 UTYO14607 1347 aa20.14■□□□□ 0.81
ERCC1-201ENST00000013807 IL1R1P14778 569 aa20.14■□□□□ 0.81
ERCC1-201ENST00000013807 KIF23Q02241 960 aaPredicted RBP20.14■□□□□ 0.81
ERCC1-201ENST00000013807 KCNJ4P48050 445 aa20.13■□□□□ 0.81
ERCC1-201ENST00000013807 FKBP1AP62942 108 aaKnown RBP20.13■□□□□ 0.81
ERCC1-201ENST00000013807 GTF2IP78347 998 aa20.13■□□□□ 0.81
ERCC1-201ENST00000013807 MTMR14Q8NCE2 650 aa20.13■□□□□ 0.81
ERCC1-201ENST00000013807 CSRNP1Q96S65 589 aa20.13■□□□□ 0.81
ERCC1-201ENST00000013807 TAF5LO75529 589 aa20.12■□□□□ 0.81
ERCC1-201ENST00000013807 CCDC57Q2TAC2 916 aa20.12■□□□□ 0.81
ERCC1-201ENST00000013807 KAZALD1Q96I82 304 aa20.12■□□□□ 0.81
ERCC1-201ENST00000013807 SRCIN1Q9C0H9 1055 aa20.12■□□□□ 0.81
ERCC1-201ENST00000013807 C9orf78Q9NZ63 289 aaPredicted RBP20.12■□□□□ 0.81
ERCC1-201ENST00000013807 HDAC9Q9UKV0 1011 aa20.12■□□□□ 0.81
ERCC1-201ENST00000013807 SNAP23O00161 211 aa20.11■□□□□ 0.81
ERCC1-201ENST00000013807 LDHAL6AQ6ZMR3 332 aa20.11■□□□□ 0.81
ERCC1-201ENST00000013807 RASAL3Q86YV0 1011 aa20.11■□□□□ 0.81
ERCC1-201ENST00000013807 APOBEC3FQ8IUX4 373 aaKnown RBP20.1■□□□□ 0.81
ERCC1-201ENST00000013807 KIAA0825Q8IV33 1275 aa20.1■□□□□ 0.81
ERCC1-201ENST00000013807 CERS5Q8N5B7 392 aa20.1■□□□□ 0.81
ERCC1-201ENST00000013807 HELBQ8NG08 1087 aaPredicted RBP20.1■□□□□ 0.81
ERCC1-201ENST00000013807 RNF186Q9NXI6 227 aa20.1■□□□□ 0.81
ERCC1-201ENST00000013807 LAMB1P07942 1786 aa20.1■□□□□ 0.81
ERCC1-201ENST00000013807 ZNF804AQ7Z570 1209 aa20.09■□□□□ 0.81
ERCC1-201ENST00000013807 FBXW7Q969H0 707 aa20.09■□□□□ 0.81
ERCC1-201ENST00000013807 CHMP3Q9Y3E7 222 aa20.09■□□□□ 0.81
ERCC1-201ENST00000013807 COL1A1P02452 1464 aaPredicted RBP20.09■□□□□ 0.81
ERCC1-201ENST00000013807 SASH1O94885 1247 aa20.08■□□□□ 0.81
ERCC1-201ENST00000013807 RGS19P49795 217 aa20.08■□□□□ 0.81
ERCC1-201ENST00000013807 UBE4AQ14139 1066 aa20.08■□□□□ 0.81
ERCC1-201ENST00000013807 RABL6Q3YEC7 729 aaPredicted RBP20.08■□□□□ 0.81
ERCC1-201ENST00000013807 MRPL50Q8N5N7 158 aaKnown RBP20.08■□□□□ 0.81
ERCC1-201ENST00000013807 ZNF594Q96JF6 807 aaPredicted RBP20.08■□□□□ 0.81
ERCC1-201ENST00000013807 MCOLN1Q9GZU1 580 aa20.08■□□□□ 0.81
ERCC1-201ENST00000013807 SCAF8Q9UPN6 1271 aaKnown RBP20.08■□□□□ 0.81
ERCC1-201ENST00000013807 PTPRCP08575 1304 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms